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The map label for this gene is hit [H]

Identifier: 218233501

GI number: 218233501

Start: 1054555

End: 1054989

Strand: Reverse

Name: hit [H]

Synonym: BCB4264_A1083

Alternate gene names: 218233501

Gene position: 1054989-1054555 (Counterclockwise)

Preceding gene: 218233187

Following gene: 218232030

Centisome position: 19.47

GC content: 35.17

Gene sequence:

>435_bases
ATGAATCATACAGCAGACAATTGTATTTTTTGTAAAATCATTGACGGGCAAATCCCTTGCTCAAAAGTATACGAAGATGA
ACATGTGCTTGCATTTTTAGATATTAGTCAAGTAACAAAAGGACATACTCTTGTTATTCCGAAAGTTCACAAACAAGACA
TTTTTGCGTTAACGCCAGAAATCGCATCACATATTTTTTCTGTCGTTCCAAAAATCGCAAATGCGATTAAAGCAGAGTTT
AATCCAGTTGGCTTTAACCTACTTAACAATAACGGTGAAAAAGCTGGACAAACTGTGTTCCACTTCCACCTTCATTTAAT
TCCACGCTACGGTGAAAAAGATGGTTTCGGTGCTGTTTGGAAATCACACCAAAATGAATACACTATGGAAAATTTACAAA
ACATCGCAAGTACAATTGCAAATAGTGTGAAATAA

Upstream 100 bases:

>100_bases
TCAGAAAACAGGAAGCTGAGTCAGCTTCCTGTTTTTCGTGTTTGTTCTCTTATGTAATTATGGTAAAATACGGCTAAGGA
TATTTGAAAGGATGAGATCA

Downstream 100 bases:

>100_bases
TGACACTATAAGAAGGCGTAATACATAACAAGCCACTTCCCTGAAGTCATCAAATTCCGCATGGCTTGTTTCTTTACTTA
AAATGCTCAGGGATGATTGT

Product: HIT family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MNHTADNCIFCKIIDGQIPCSKVYEDEHVLAFLDISQVTKGHTLVIPKVHKQDIFALTPEIASHIFSVVPKIANAIKAEF
NPVGFNLLNNNGEKAGQTVFHFHLHLIPRYGEKDGFGAVWKSHQNEYTMENLQNIASTIANSVK

Sequences:

>Translated_144_residues
MNHTADNCIFCKIIDGQIPCSKVYEDEHVLAFLDISQVTKGHTLVIPKVHKQDIFALTPEIASHIFSVVPKIANAIKAEF
NPVGFNLLNNNGEKAGQTVFHFHLHLIPRYGEKDGFGAVWKSHQNEYTMENLQNIASTIANSVK
>Mature_144_residues
MNHTADNCIFCKIIDGQIPCSKVYEDEHVLAFLDISQVTKGHTLVIPKVHKQDIFALTPEIASHIFSVVPKIANAIKAEF
NPVGFNLLNNNGEKAGQTVFHFHLHLIPRYGEKDGFGAVWKSHQNEYTMENLQNIASTIANSVK

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320078, Length=120, Percent_Identity=37.5, Blast_Score=92, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 16084; Mature: 16084

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHTADNCIFCKIIDGQIPCSKVYEDEHVLAFLDISQVTKGHTLVIPKVHKQDIFALTPE
CCCCCCCEEEEEEECCCCCHHHHCCCCCEEEEEEHHHHCCCCEEEECCCCCCCCEEECHH
IASHIFSVVPKIANAIKAEFNPVGFNLLNNNGEKAGQTVFHFHLHLIPRYGEKDGFGAVW
HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHEEEEEEEEEEECCCCCCCCHHHH
KSHQNEYTMENLQNIASTIANSVK
HCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNHTADNCIFCKIIDGQIPCSKVYEDEHVLAFLDISQVTKGHTLVIPKVHKQDIFALTPE
CCCCCCCEEEEEEECCCCCHHHHCCCCCEEEEEEHHHHCCCCEEEECCCCCCCCEEECHH
IASHIFSVVPKIANAIKAEFNPVGFNLLNNNGEKAGQTVFHFHLHLIPRYGEKDGFGAVW
HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHEEEEEEEEEEECCCCCCCCHHHH
KSHQNEYTMENLQNIASTIANSVK
HCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]