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The map label for this gene is yebA [C]

Identifier: 218232789

GI number: 218232789

Start: 759719

End: 760873

Strand: Reverse

Name: yebA [C]

Synonym: BCB4264_A0779

Alternate gene names: 218232789

Gene position: 760873-759719 (Counterclockwise)

Preceding gene: 218233100

Following gene: 218234553

Centisome position: 14.04

GC content: 34.89

Gene sequence:

>1155_bases
ATGAATATGAAAGCTACTGCTTTAACAGCAACTACTGTAGCGATTGCTTCTTTACTTCCTTCTATGGGTGAAACAAATGT
ACAAAAAGCAAACGCTGAACAATTATCTAATATTAAAACTGGGTATGTCAAAGTCGATCAAGTAGCATTACATACAGAAG
ATAACGTAAAAAGCACATCAATTGATACAATTCGCTTTAATACAAAAGTGAACATCCTTGAAACAACTAATGGTTGGTAT
AAAGTATCTGTTCATAATAAAGTAGGTTATGTACAAAAAGATGCTATTTTACTAAAAAACAAACTTCAATCTAATGATCA
ATACATCGTTAATGCTAATGCATTAAACGTTCGCTCTGAACCTAATTTAGAATCTTCCATTTTAGATGTATTACCAAATG
GTAAGTTTATTACCGTTCAAGAAGATCAAGGCGAATGGTATAAAATATCACATAATGGCCAAACAGGTTACGTACAAAAA
GCATTCATATCTAATGGTTCACAACCCTTAGTAAAAGGAATCACCGTTCAAAATAATACAAAATATACTGTTGCAACACC
TAATCTAAATGTACGTAGCACCGCTAGTACAAGTAGCGCTCTACTCGGTTCATTACAAAACGGTACACAAGTACAAGTAG
TAGAAACTGTAGGTACTTGGTATAAAATTCGTTTTGGCACAGGATACGGATATGTAGCAAAACACTATGTAGTACAAAAT
CAACCACAAGCTAAAACAGATCAGCCTTCATCAATTCCAGCTGCTTTCAAATTCCCCGCTCAAGGAAGAATTAGCTCAAC
CTTTGATATACGCTGGGAACAAATGCATTATGGTATAGATATTGCCGCTCCAGGAAACGTCTCTATCCAAGCTGCTGCTG
CAGGTAAAGTTGTGAAATCTTATTATTCAGCTAGCTATGGCAATGTTGTTTTCATTGCGCATCAAATCAATGGGAAATTA
TATACAACTGTTTATGCTCATATGAAGGATCGCACTGTACAAGCTGGTGATCAAGTACAAACTGGACAATTAATAGGTCA
TATGGGAAACACAGGTCATTCATACGGGCAACATCTTCATTTTGAATTACATAATGGAGAATGGAATTTTGAAAAAACAA
ATGCAGTAAATCCACTGCCATATTTAGTTAGGTAA

Upstream 100 bases:

>100_bases
ATATTGATTTCATATTACATTTATGTGAATACCCCCACTATATTATATCTTTATACTATAATAAAATTACAACTATACAA
CTAGAGGAGGTCTCTATTCC

Downstream 100 bases:

>100_bases
ATTGTATGCCACGCAATATACCTCTTATAATTGAATACGTAGCCTTTTTAGGTTTAATCTGTTGTTTAATCATTTACAAT
ACAAATATTGTATTTTTATC

Product: peptidase, M23/M37 family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MNMKATALTATTVAIASLLPSMGETNVQKANAEQLSNIKTGYVKVDQVALHTEDNVKSTSIDTIRFNTKVNILETTNGWY
KVSVHNKVGYVQKDAILLKNKLQSNDQYIVNANALNVRSEPNLESSILDVLPNGKFITVQEDQGEWYKISHNGQTGYVQK
AFISNGSQPLVKGITVQNNTKYTVATPNLNVRSTASTSSALLGSLQNGTQVQVVETVGTWYKIRFGTGYGYVAKHYVVQN
QPQAKTDQPSSIPAAFKFPAQGRISSTFDIRWEQMHYGIDIAAPGNVSIQAAAAGKVVKSYYSASYGNVVFIAHQINGKL
YTTVYAHMKDRTVQAGDQVQTGQLIGHMGNTGHSYGQHLHFELHNGEWNFEKTNAVNPLPYLVR

Sequences:

>Translated_384_residues
MNMKATALTATTVAIASLLPSMGETNVQKANAEQLSNIKTGYVKVDQVALHTEDNVKSTSIDTIRFNTKVNILETTNGWY
KVSVHNKVGYVQKDAILLKNKLQSNDQYIVNANALNVRSEPNLESSILDVLPNGKFITVQEDQGEWYKISHNGQTGYVQK
AFISNGSQPLVKGITVQNNTKYTVATPNLNVRSTASTSSALLGSLQNGTQVQVVETVGTWYKIRFGTGYGYVAKHYVVQN
QPQAKTDQPSSIPAAFKFPAQGRISSTFDIRWEQMHYGIDIAAPGNVSIQAAAAGKVVKSYYSASYGNVVFIAHQINGKL
YTTVYAHMKDRTVQAGDQVQTGQLIGHMGNTGHSYGQHLHFELHNGEWNFEKTNAVNPLPYLVR
>Mature_384_residues
MNMKATALTATTVAIASLLPSMGETNVQKANAEQLSNIKTGYVKVDQVALHTEDNVKSTSIDTIRFNTKVNILETTNGWY
KVSVHNKVGYVQKDAILLKNKLQSNDQYIVNANALNVRSEPNLESSILDVLPNGKFITVQEDQGEWYKISHNGQTGYVQK
AFISNGSQPLVKGITVQNNTKYTVATPNLNVRSTASTSSALLGSLQNGTQVQVVETVGTWYKIRFGTGYGYVAKHYVVQN
QPQAKTDQPSSIPAAFKFPAQGRISSTFDIRWEQMHYGIDIAAPGNVSIQAAAAGKVVKSYYSASYGNVVFIAHQINGKL
YTTVYAHMKDRTVQAGDQVQTGQLIGHMGNTGHSYGQHLHFELHNGEWNFEKTNAVNPLPYLVR

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=133, Percent_Identity=36.8421052631579, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1789099, Length=128, Percent_Identity=35.9375, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 42190; Mature: 42190

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMKATALTATTVAIASLLPSMGETNVQKANAEQLSNIKTGYVKVDQVALHTEDNVKSTS
CCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCEEEEEEEEEECCCCCCCCE
IDTIRFNTKVNILETTNGWYKVSVHNKVGYVQKDAILLKNKLQSNDQYIVNANALNVRSE
EEEEEECCEEEEEEECCCEEEEEEECCCCEEECCHHEEHHHCCCCCCEEEEECEEEECCC
PNLESSILDVLPNGKFITVQEDQGEWYKISHNGQTGYVQKAFISNGSQPLVKGITVQNNT
CCHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCEEEEEEECCC
KYTVATPNLNVRSTASTSSALLGSLQNGTQVQVVETVGTWYKIRFGTGYGYVAKHYVVQN
EEEEECCCCCEEECCCCHHHHHHHCCCCCEEEEEEECCCEEEEEEECCCCCEEEEEEECC
QPQAKTDQPSSIPAAFKFPAQGRISSTFDIRWEQMHYGIDIAAPGNVSIQAAAAGKVVKS
CCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEEEEEEEEEEECCCCEEEEEHHHHHHHHH
YYSASYGNVVFIAHQINGKLYTTVYAHMKDRTVQAGDQVQTGQLIGHMGNTGHSYGQHLH
HHCCCCCCEEEEEEECCCEEEEEEEEEECCCEECCCCCEECCHHEECCCCCCCCCCCEEE
FELHNGEWNFEKTNAVNPLPYLVR
EEEECCEECEECCCCCCCCCHHCC
>Mature Secondary Structure
MNMKATALTATTVAIASLLPSMGETNVQKANAEQLSNIKTGYVKVDQVALHTEDNVKSTS
CCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCEEEEEEEEEECCCCCCCCE
IDTIRFNTKVNILETTNGWYKVSVHNKVGYVQKDAILLKNKLQSNDQYIVNANALNVRSE
EEEEEECCEEEEEEECCCEEEEEEECCCCEEECCHHEEHHHCCCCCCEEEEECEEEECCC
PNLESSILDVLPNGKFITVQEDQGEWYKISHNGQTGYVQKAFISNGSQPLVKGITVQNNT
CCHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCEEEEEEECCC
KYTVATPNLNVRSTASTSSALLGSLQNGTQVQVVETVGTWYKIRFGTGYGYVAKHYVVQN
EEEEECCCCCEEECCCCHHHHHHHCCCCCEEEEEEECCCEEEEEEECCCCCEEEEEEECC
QPQAKTDQPSSIPAAFKFPAQGRISSTFDIRWEQMHYGIDIAAPGNVSIQAAAAGKVVKS
CCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEEEEEEEEEEECCCCEEEEEHHHHHHHHH
YYSASYGNVVFIAHQINGKLYTTVYAHMKDRTVQAGDQVQTGQLIGHMGNTGHSYGQHLH
HHCCCCCCEEEEEEECCCEEEEEEEEEECCCEECCCCCEECCHHEECCCCCCCCCCCEEE
FELHNGEWNFEKTNAVNPLPYLVR
EEEECCEECEECCCCCCCCCHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]