Click here to switch to the map view.

The map label for this gene is ycdQ [C]

Identifier: 218232759

GI number: 218232759

Start: 2897288

End: 2898805

Strand: Reverse

Name: ycdQ [C]

Synonym: BCB4264_A3023

Alternate gene names: 218232759

Gene position: 2898805-2897288 (Counterclockwise)

Preceding gene: 218232099

Following gene: 218233300

Centisome position: 53.49

GC content: 32.94

Gene sequence:

>1518_bases
ATGAAATCGTTAACGGTTATTATTTTGTACAGTGAAAGAGAGCAAATATTAGAAGAGTCAATTCAATCTATATGGAAGCT
AAATCCTCTTGAAATTATAATTTTAGTTCCTAACGATAGAAGTAATTTGTATGAAATAGCAAAGAAACATAAATGTCATA
TTGTTTTTATGGACAAATATAATAAGCATTATGATGGATATGGAGCTTGTATAAAGGCAGCAAAAGGAGAAGTTTTATTA
TTTTTAGATGGCAATTTTTCGTTATCCACAAATGAAATGCAGAGATTTATTGAGCCAATTGTTACAAATCAAGCCGATGT
AGTTTTAAATAAAATAGATAAATTGATAGAAATAGGTAAATGTCCAAATATGGATATTGTATGGAGAAAAATGTTAAATG
AAATTTTAAGTCGACCAGATTTAAAAAGCAATTCAATACTTTCGTTACCATATGCGCTTACGAAGGAAGTAGTGGAAAAT
ATCGGCTTTAATTATATGGAAGATATCGTTCTATCTCATATGAAGATTGTGAATCAAGGGTGGCGGATTAACGATCAATA
TGCAATCAATACGTTATCTAAAGATGAGACTATAGAGGAAGGAGGATATTTAATAAAAAAAGAGTTATCCAAAAATGAAA
AAGAGAAAGTAGAAAGATATTTACGCGGTATAGCTAAATGGATAGAGAAAAAAGGAAGAAGAGTAGGGTTTACTGATGCA
GGAAAAAGAAGAGATATTGTTCAAAAACTAGGTGAATGTAAGCGATACCCTTCCTATCATCAAGGGTGGGGAATGCATTC
TTCAATTTATGATGGGAAGCAACTTTCTGTCATTATACCAGTACAAAATGAAGAAGAGACTATAGAACAAGTAATACTTG
AGGCGAGAAAAATAGAACCACTAGAAATCATCGTCGTTGTAAATGGTTCGACAGATCAAACGGCTAATATTGCTAAAAGA
CTTGGTGTTACTATTATTGAATATAACGAACGACTTGGTCATAATGTTGGACGTGCTATTGGAGCGCTTGAAGCTACAGG
AGATATTCTTTTATTTATTGATGGTGATTTTAGTGTTTCAGGAAGTAATTTGCATCATTTTACAAAAGCAGTTTCAGCTG
GTGTAGACATAGCATTAAATGATTTGAATCCGATGTTACACCCTCCGTTTTATGTTGTAGACGTCGTAAAATATATGCTT
AATTTAGCATATAATCGTCCAGAATTAAGCAATGGCTCATTAGTAGCAATTCCACATGCTATGAGTAGATCATGTTTAGA
TGCAATAGGCTGGGAAAGCTTACTATGCCCTAGTCTTGCACAAGTAAAAGCAATATTACAAGGGTATAGAGTAGAATGTG
TACATTACGTTGATGTTGTAAAACCGAATAGAATTCGTTTAATGGAAAATGTAAGTCACAATGGGCATCCTCCAGCAGTA
TTAAGAATAATTGGTGATCACGTTGAAGCTCTCTCTTACTTGATAGAACAACTCGAAATGGATGGAAAGGGTGATTAA

Upstream 100 bases:

>100_bases
CAGTATAATTCACTTTTGAATATGTTAATAAAGTAGCAAATTCATAGGAAATGGTAATACTTAATATTTTATGTCACATG
ATGTGTAAAGGGGGCGTGTA

Downstream 100 bases:

>100_bases
ACTGTTAGACCAGTATAAAATAATTAACATTTCATATGAACAATTATGGCAAATGGATTTTCAAATTACAGAACCATTTA
TACTCAAGGTTGATTGGGAT

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: Glycosyl Transferase Family Protein; Glycosyltransferase Involved In Cell Wall Biogenesis; Glycosyltransferase/Glycosyltransferase; Cell Wall Biosynthesis Glycosyltransferase; Family 2 Glycosyl Transferase; Glycosyltransferase; Glycosyl Transferase Domain-Containing Protein

Number of amino acids: Translated: 505; Mature: 505

Protein sequence:

>505_residues
MKSLTVIILYSEREQILEESIQSIWKLNPLEIIILVPNDRSNLYEIAKKHKCHIVFMDKYNKHYDGYGACIKAAKGEVLL
FLDGNFSLSTNEMQRFIEPIVTNQADVVLNKIDKLIEIGKCPNMDIVWRKMLNEILSRPDLKSNSILSLPYALTKEVVEN
IGFNYMEDIVLSHMKIVNQGWRINDQYAINTLSKDETIEEGGYLIKKELSKNEKEKVERYLRGIAKWIEKKGRRVGFTDA
GKRRDIVQKLGECKRYPSYHQGWGMHSSIYDGKQLSVIIPVQNEEETIEQVILEARKIEPLEIIVVVNGSTDQTANIAKR
LGVTIIEYNERLGHNVGRAIGALEATGDILLFIDGDFSVSGSNLHHFTKAVSAGVDIALNDLNPMLHPPFYVVDVVKYML
NLAYNRPELSNGSLVAIPHAMSRSCLDAIGWESLLCPSLAQVKAILQGYRVECVHYVDVVKPNRIRLMENVSHNGHPPAV
LRIIGDHVEALSYLIEQLEMDGKGD

Sequences:

>Translated_505_residues
MKSLTVIILYSEREQILEESIQSIWKLNPLEIIILVPNDRSNLYEIAKKHKCHIVFMDKYNKHYDGYGACIKAAKGEVLL
FLDGNFSLSTNEMQRFIEPIVTNQADVVLNKIDKLIEIGKCPNMDIVWRKMLNEILSRPDLKSNSILSLPYALTKEVVEN
IGFNYMEDIVLSHMKIVNQGWRINDQYAINTLSKDETIEEGGYLIKKELSKNEKEKVERYLRGIAKWIEKKGRRVGFTDA
GKRRDIVQKLGECKRYPSYHQGWGMHSSIYDGKQLSVIIPVQNEEETIEQVILEARKIEPLEIIVVVNGSTDQTANIAKR
LGVTIIEYNERLGHNVGRAIGALEATGDILLFIDGDFSVSGSNLHHFTKAVSAGVDIALNDLNPMLHPPFYVVDVVKYML
NLAYNRPELSNGSLVAIPHAMSRSCLDAIGWESLLCPSLAQVKAILQGYRVECVHYVDVVKPNRIRLMENVSHNGHPPAV
LRIIGDHVEALSYLIEQLEMDGKGD
>Mature_505_residues
MKSLTVIILYSEREQILEESIQSIWKLNPLEIIILVPNDRSNLYEIAKKHKCHIVFMDKYNKHYDGYGACIKAAKGEVLL
FLDGNFSLSTNEMQRFIEPIVTNQADVVLNKIDKLIEIGKCPNMDIVWRKMLNEILSRPDLKSNSILSLPYALTKEVVEN
IGFNYMEDIVLSHMKIVNQGWRINDQYAINTLSKDETIEEGGYLIKKELSKNEKEKVERYLRGIAKWIEKKGRRVGFTDA
GKRRDIVQKLGECKRYPSYHQGWGMHSSIYDGKQLSVIIPVQNEEETIEQVILEARKIEPLEIIVVVNGSTDQTANIAKR
LGVTIIEYNERLGHNVGRAIGALEATGDILLFIDGDFSVSGSNLHHFTKAVSAGVDIALNDLNPMLHPPFYVVDVVKYML
NLAYNRPELSNGSLVAIPHAMSRSCLDAIGWESLLCPSLAQVKAILQGYRVECVHYVDVVKPNRIRLMENVSHNGHPPAV
LRIIGDHVEALSYLIEQLEMDGKGD

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57179; Mature: 57179

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLTVIILYSEREQILEESIQSIWKLNPLEIIILVPNDRSNLYEIAKKHKCHIVFMDKY
CCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCEEEEEEECC
NKHYDGYGACIKAAKGEVLLFLDGNFSLSTNEMQRFIEPIVTNQADVVLNKIDKLIEIGK
CCCCCCHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
CPNMDIVWRKMLNEILSRPDLKSNSILSLPYALTKEVVENIGFNYMEDIVLSHMKIVNQG
CCCCHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
WRINDQYAINTLSKDETIEEGGYLIKKELSKNEKEKVERYLRGIAKWIEKKGRRVGFTDA
CCCCCCCEEECCCCCCHHHCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHHCCCEECCCCC
GKRRDIVQKLGECKRYPSYHQGWGMHSSIYDGKQLSVIIPVQNEEETIEQVILEARKIEP
CHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCC
LEIIVVVNGSTDQTANIAKRLGVTIIEYNERLGHNVGRAIGALEATGDILLFIDGDFSVS
EEEEEEEECCCCHHHHHHHHHCCEEEECCHHHCHHHHHHHHHHCCCCCEEEEECCCCEEC
GSNLHHFTKAVSAGVDIALNDLNPMLHPPFYVVDVVKYMLNLAYNRPELSNGSLVAIPHA
CCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCH
MSRSCLDAIGWESLLCPSLAQVKAILQGYRVECVHYVDVVKPNRIRLMENVSHNGHPPAV
HHHHHHHHHCHHHHHCCCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCHHH
LRIIGDHVEALSYLIEQLEMDGKGD
HHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKSLTVIILYSEREQILEESIQSIWKLNPLEIIILVPNDRSNLYEIAKKHKCHIVFMDKY
CCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCEEEEEEECC
NKHYDGYGACIKAAKGEVLLFLDGNFSLSTNEMQRFIEPIVTNQADVVLNKIDKLIEIGK
CCCCCCHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
CPNMDIVWRKMLNEILSRPDLKSNSILSLPYALTKEVVENIGFNYMEDIVLSHMKIVNQG
CCCCHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
WRINDQYAINTLSKDETIEEGGYLIKKELSKNEKEKVERYLRGIAKWIEKKGRRVGFTDA
CCCCCCCEEECCCCCCHHHCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHHCCCEECCCCC
GKRRDIVQKLGECKRYPSYHQGWGMHSSIYDGKQLSVIIPVQNEEETIEQVILEARKIEP
CHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCC
LEIIVVVNGSTDQTANIAKRLGVTIIEYNERLGHNVGRAIGALEATGDILLFIDGDFSVS
EEEEEEEECCCCHHHHHHHHHCCEEEECCHHHCHHHHHHHHHHCCCCCEEEEECCCCEEC
GSNLHHFTKAVSAGVDIALNDLNPMLHPPFYVVDVVKYMLNLAYNRPELSNGSLVAIPHA
CCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCH
MSRSCLDAIGWESLLCPSLAQVKAILQGYRVECVHYVDVVKPNRIRLMENVSHNGHPPAV
HHHHHHHHHCHHHHHCCCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCHHH
LRIIGDHVEALSYLIEQLEMDGKGD
HHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA