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The map label for this gene is ygaK [H]

Identifier: 218231878

GI number: 218231878

Start: 403367

End: 404701

Strand: Reverse

Name: ygaK [H]

Synonym: BCB4264_A0426

Alternate gene names: 218231878

Gene position: 404701-403367 (Counterclockwise)

Preceding gene: 218231865

Following gene: 218234015

Centisome position: 7.47

GC content: 37.6

Gene sequence:

>1335_bases
TTGAAGCAAACAAAATTAACAGGTCGTATCGTTGTTCCCACAGATCTTGACTACGACGTAGCCCGAATGAATTTAAATTT
AAGTATTCCAAAACTCCCTTGTATTATTGTTTTTTGTCAAAATAACAAGGATGTCTGTAACGCCTTAAAATGGGCACGTG
AACGTCATATACCATTTCGGTTAAGAAGTGGACGTCATAGCTATGAAAATTTTTCTCTTTTAAATAGAGGACTTATTATT
GATGTGAGTGAAATGCATCGCATTACTGTTAATACAGAGAAATTAACAGCAACAATTGAGGCTGGTGCAAATCTTGGCAC
TATTTATAAAGAACTTTGGAATTACGGTGTTACAATTCCTGCTGGTACAAGTGCAAGCGTTGGAATTGTTGGATTAGCAC
TTGGTGGTGGTATTGGTATGCTTTCGCGCTTATATGGATTAACATGTGATCAATTAATGGAAGTGGAAATGGTACAAGCA
TGTGGAAAATTTGGTGCAAAACTCATTCGTGCAAATGAACAAGAGAACTCTAACCTTTTTTGGGCATGCCGTGGTGGCGG
TGGTGGAAACTTTGGAATTGTCACTTCATTAACTTTTCGAGTCCACCCGATAAAAAATGTATCAATTTTCTCAATTACAT
GGGAATGGGAAGACTTTATTGCTGCATTTCAAGCGTGGCAAAACTGGGCACCTTATATAGATGAACGTCTCACTTCATCG
ATCGAATTATTCGCCAAGCAACGAAATAAAATCGAAGCACAAGGCGAGTTTATCGGTTCTCCCTCTGAACTCCATTCCCT
ATTATCCCCTCTTCTTGAAACTGGTAGCCCCTCTCTCTTTATAGAAGAAGTTCCTTATATAAAGGCTGTTGAATTTTTTA
ATGGAGGTAACATCCCTGAAAATTTCAAGCGCTCTGGTTCCTATGTCTATAAACCTATTCCCCTTAAAGGCATTCAAATC
ATGCAATCCTTTCTTTCTCATGCACCAAATAAAGATGCTAGTATTTGGCATCAATCGCTCATAGGTGCTGTTGAAAATAT
TTCGCCGAATGAAACGGCTTATTTTCATCGTAAAGCAATTATTGCTCAAGAATACATTACCTCTTGGAAATGCGATGATG
AAGAAAATCGAAATATACGCTGGGTTAAAGGTTTACGAGAAAGCTTAGATCCTTATACACTAGGTGACTATGTGAACTGG
CCCGATATCGACATTAAAAATTGGCAAACTAGTTATTATGGCTCTAACTTTCACAGATTACGTAAAGTAAAAACCATGTA
TGATCCTTGTGATGTTTTTCATTTCCAACAAAGTATTCCTCCTTTTCATACGTGA

Upstream 100 bases:

>100_bases
AAGGTAAATCTCATTCTTCATCTCTCCTTGTCCACGCGTATTACAGACATTTTTCATATATTAATAAAAAACTCTGATTA
TTTTAGAAAGGAGTAATAAA

Downstream 100 bases:

>100_bases
AAAAAGGGGATAACATAAAAAAATCATCCAATATACCGTTACCTCGCAGTATGTTGGATGATTCAAGTTGATTTTCTATA
TCGTTTCAAATTCTTGCTCC

Product: FAD-dependent oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MKQTKLTGRIVVPTDLDYDVARMNLNLSIPKLPCIIVFCQNNKDVCNALKWARERHIPFRLRSGRHSYENFSLLNRGLII
DVSEMHRITVNTEKLTATIEAGANLGTIYKELWNYGVTIPAGTSASVGIVGLALGGGIGMLSRLYGLTCDQLMEVEMVQA
CGKFGAKLIRANEQENSNLFWACRGGGGGNFGIVTSLTFRVHPIKNVSIFSITWEWEDFIAAFQAWQNWAPYIDERLTSS
IELFAKQRNKIEAQGEFIGSPSELHSLLSPLLETGSPSLFIEEVPYIKAVEFFNGGNIPENFKRSGSYVYKPIPLKGIQI
MQSFLSHAPNKDASIWHQSLIGAVENISPNETAYFHRKAIIAQEYITSWKCDDEENRNIRWVKGLRESLDPYTLGDYVNW
PDIDIKNWQTSYYGSNFHRLRKVKTMYDPCDVFHFQQSIPPFHT

Sequences:

>Translated_444_residues
MKQTKLTGRIVVPTDLDYDVARMNLNLSIPKLPCIIVFCQNNKDVCNALKWARERHIPFRLRSGRHSYENFSLLNRGLII
DVSEMHRITVNTEKLTATIEAGANLGTIYKELWNYGVTIPAGTSASVGIVGLALGGGIGMLSRLYGLTCDQLMEVEMVQA
CGKFGAKLIRANEQENSNLFWACRGGGGGNFGIVTSLTFRVHPIKNVSIFSITWEWEDFIAAFQAWQNWAPYIDERLTSS
IELFAKQRNKIEAQGEFIGSPSELHSLLSPLLETGSPSLFIEEVPYIKAVEFFNGGNIPENFKRSGSYVYKPIPLKGIQI
MQSFLSHAPNKDASIWHQSLIGAVENISPNETAYFHRKAIIAQEYITSWKCDDEENRNIRWVKGLRESLDPYTLGDYVNW
PDIDIKNWQTSYYGSNFHRLRKVKTMYDPCDVFHFQQSIPPFHT
>Mature_444_residues
MKQTKLTGRIVVPTDLDYDVARMNLNLSIPKLPCIIVFCQNNKDVCNALKWARERHIPFRLRSGRHSYENFSLLNRGLII
DVSEMHRITVNTEKLTATIEAGANLGTIYKELWNYGVTIPAGTSASVGIVGLALGGGIGMLSRLYGLTCDQLMEVEMVQA
CGKFGAKLIRANEQENSNLFWACRGGGGGNFGIVTSLTFRVHPIKNVSIFSITWEWEDFIAAFQAWQNWAPYIDERLTSS
IELFAKQRNKIEAQGEFIGSPSELHSLLSPLLETGSPSLFIEEVPYIKAVEFFNGGNIPENFKRSGSYVYKPIPLKGIQI
MQSFLSHAPNKDASIWHQSLIGAVENISPNETAYFHRKAIIAQEYITSWKCDDEENRNIRWVKGLRESLDPYTLGDYVNW
PDIDIKNWQTSYYGSNFHRLRKVKTMYDPCDVFHFQQSIPPFHT

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012951
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016168
- InterPro:   IPR006094 [H]

Pfam domain/function: PF08031 BBE; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 50347; Mature: 50347

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQTKLTGRIVVPTDLDYDVARMNLNLSIPKLPCIIVFCQNNKDVCNALKWARERHIPFR
CCCCCCCCEEEECCCCCCCEEEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHCCCCEE
LRSGRHSYENFSLLNRGLIIDVSEMHRITVNTEKLTATIEAGANLGTIYKELWNYGVTIP
ECCCCCCCHHHHHHCCCEEEEEHHCEEEEEEHHHEEEEEECCCCHHHHHHHHHHCCCEEC
AGTSASVGIVGLALGGGIGMLSRLYGLTCDQLMEVEMVQACGKFGAKLIRANEQENSNLF
CCCCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
WACRGGGGGNFGIVTSLTFRVHPIKNVSIFSITWEWEDFIAAFQAWQNWAPYIDERLTSS
EEEECCCCCCEEEEEEEEEEEEECCCEEEEEEEECHHHHHHHHHHHHCCCHHHHHHHHHH
IELFAKQRNKIEAQGEFIGSPSELHSLLSPLLETGSPSLFIEEVPYIKAVEFFNGGNIPE
HHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCCCH
NFKRSGSYVYKPIPLKGIQIMQSFLSHAPNKDASIWHQSLIGAVENISPNETAYFHRKAI
HHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH
IAQEYITSWKCDDEENRNIRWVKGLRESLDPYTLGDYVNWPDIDIKNWQTSYYGSNFHRL
HHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
RKVKTMYDPCDVFHFQQSIPPFHT
HHHHHHCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKQTKLTGRIVVPTDLDYDVARMNLNLSIPKLPCIIVFCQNNKDVCNALKWARERHIPFR
CCCCCCCCEEEECCCCCCCEEEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHCCCCEE
LRSGRHSYENFSLLNRGLIIDVSEMHRITVNTEKLTATIEAGANLGTIYKELWNYGVTIP
ECCCCCCCHHHHHHCCCEEEEEHHCEEEEEEHHHEEEEEECCCCHHHHHHHHHHCCCEEC
AGTSASVGIVGLALGGGIGMLSRLYGLTCDQLMEVEMVQACGKFGAKLIRANEQENSNLF
CCCCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
WACRGGGGGNFGIVTSLTFRVHPIKNVSIFSITWEWEDFIAAFQAWQNWAPYIDERLTSS
EEEECCCCCCEEEEEEEEEEEEECCCEEEEEEEECHHHHHHHHHHHHCCCHHHHHHHHHH
IELFAKQRNKIEAQGEFIGSPSELHSLLSPLLETGSPSLFIEEVPYIKAVEFFNGGNIPE
HHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCCCH
NFKRSGSYVYKPIPLKGIQIMQSFLSHAPNKDASIWHQSLIGAVENISPNETAYFHRKAI
HHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH
IAQEYITSWKCDDEENRNIRWVKGLRESLDPYTLGDYVNWPDIDIKNWQTSYYGSNFHRL
HHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
RKVKTMYDPCDVFHFQQSIPPFHT
HHHHHHCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202460; 9384377 [H]