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The map label for this gene is ygaE [H]

Identifier: 218231485

GI number: 218231485

Start: 513640

End: 514728

Strand: Reverse

Name: ygaE [H]

Synonym: BCB4264_A0533

Alternate gene names: 218231485

Gene position: 514728-513640 (Counterclockwise)

Preceding gene: 218231636

Following gene: 218233374

Centisome position: 9.5

GC content: 32.51

Gene sequence:

>1089_bases
ATGAAACTTGGTGCTCGCATTTTAAAAACGGGTATTGCCATCACGTTAGCTTTATTTGCTTGTATTTTACTTCAATTACC
GAGTCCGGTATTTGCGGGAATTTCAGCTATCTTTGCTGTTCAACCGTCTGTATACCGTTCTTATTTAACAGCACTTGAAC
AAATTCAAGCAAATGTAATTGGTGCGATATTTGCTATCGCATTTGCTACTGCTTTTGGACATAATCCTTTTATTATTGGA
TTAACATGTATATTAGTAATTGCTCTTACATTACAATTACGATTAGAAAACACAATATCAATTGCTTTAGTAACAGTTAT
CGCCATTATGGAGTATCAAGGCGAAGATTTCTTTAGTTTTGCCTTACTTCGATTTGCGACGATTATGATTGGTATTATTG
CGGCTTCACTTGTAAATTTAGTATTTATGCCGCCAAAATATGAAACAAAACTTTATCATCGTATCGTTGATAATACAGAA
GAAATTGTAAAATGGATTCGAATGAATAGCAGGCAGGCTTCTGATTTTACAACGCTAAAAACTGATATTGATCGTATGAA
AGAAAAAATGATCAAACTAAACCATTACTATTTGCTGTATAAAGAAGAAAGAAGCTACACGAAAAAAGTAAAGTTCGCAA
AAATTCGTAAGCTCGTTTTATTCAGACAAATGTTAGCGACAACAAGCCGTGCTTTAAGTACGTTAAAATCATTACACCGT
ACTGAAAATGAACTGCGCTATATGCCGGAAGAATTTCAGGAATCTATCCAAAACGAACTTGACTCATTAACGCATTATCA
TGAACAAGTTTTATTAAAATTTATTGGTAAAGCAAAAAAACAACAATCAGTTGAAATGCTTGATGAAGTTGAAACAGGTA
AACAAGAATTAATTGATATCTTTATGGAATATCAAAATAAAGACGATGAAGAAGCATATAAAACATGGTTACATCTCTTC
CCTCTTATTTCTTCCATCATTAACTATAGTGAAGAAGTAGAGCATTTAGATTTGCTTGTAGATAGCTTCTACACATACCA
TAAACCAGAAAAAGAACTCCAAATCGATGATAAAAAAGAAGACGAATAA

Upstream 100 bases:

>100_bases
TTTTAACGTCACTAAAATATCACTTGCTAACATATTGTAATGAATGTATAGTATCATGTTGTACATTCATTATGACAAGA
GAAAGGATCTTATTAAGGGT

Downstream 100 bases:

>100_bases
AAAACAGCTCCTTTTATGCTAAAGGAGCTGTTTCTGTTATATGTTGAAGTTGATATAAATTGTAATAAAATCCTCTTTTT
CGCATTAACTCTTCATGAGA

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MKLGARILKTGIAITLALFACILLQLPSPVFAGISAIFAVQPSVYRSYLTALEQIQANVIGAIFAIAFATAFGHNPFIIG
LTCILVIALTLQLRLENTISIALVTVIAIMEYQGEDFFSFALLRFATIMIGIIAASLVNLVFMPPKYETKLYHRIVDNTE
EIVKWIRMNSRQASDFTTLKTDIDRMKEKMIKLNHYYLLYKEERSYTKKVKFAKIRKLVLFRQMLATTSRALSTLKSLHR
TENELRYMPEEFQESIQNELDSLTHYHEQVLLKFIGKAKKQQSVEMLDEVETGKQELIDIFMEYQNKDDEEAYKTWLHLF
PLISSIINYSEEVEHLDLLVDSFYTYHKPEKELQIDDKKEDE

Sequences:

>Translated_362_residues
MKLGARILKTGIAITLALFACILLQLPSPVFAGISAIFAVQPSVYRSYLTALEQIQANVIGAIFAIAFATAFGHNPFIIG
LTCILVIALTLQLRLENTISIALVTVIAIMEYQGEDFFSFALLRFATIMIGIIAASLVNLVFMPPKYETKLYHRIVDNTE
EIVKWIRMNSRQASDFTTLKTDIDRMKEKMIKLNHYYLLYKEERSYTKKVKFAKIRKLVLFRQMLATTSRALSTLKSLHR
TENELRYMPEEFQESIQNELDSLTHYHEQVLLKFIGKAKKQQSVEMLDEVETGKQELIDIFMEYQNKDDEEAYKTWLHLF
PLISSIINYSEEVEHLDLLVDSFYTYHKPEKELQIDDKKEDE
>Mature_362_residues
MKLGARILKTGIAITLALFACILLQLPSPVFAGISAIFAVQPSVYRSYLTALEQIQANVIGAIFAIAFATAFGHNPFIIG
LTCILVIALTLQLRLENTISIALVTVIAIMEYQGEDFFSFALLRFATIMIGIIAASLVNLVFMPPKYETKLYHRIVDNTE
EIVKWIRMNSRQASDFTTLKTDIDRMKEKMIKLNHYYLLYKEERSYTKKVKFAKIRKLVLFRQMLATTSRALSTLKSLHR
TENELRYMPEEFQESIQNELDSLTHYHEQVLLKFIGKAKKQQSVEMLDEVETGKQELIDIFMEYQNKDDEEAYKTWLHLF
PLISSIINYSEEVEHLDLLVDSFYTYHKPEKELQIDDKKEDE

Specific function: Unknown

COG id: COG4129

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0421 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010343 [H]

Pfam domain/function: PF06081 DUF939 [H]

EC number: NA

Molecular weight: Translated: 41891; Mature: 41891

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLGARILKTGIAITLALFACILLQLPSPVFAGISAIFAVQPSVYRSYLTALEQIQANVI
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GAIFAIAFATAFGHNPFIIGLTCILVIALTLQLRLENTISIALVTVIAIMEYQGEDFFSF
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
ALLRFATIMIGIIAASLVNLVFMPPKYETKLYHRIVDNTEEIVKWIRMNSRQASDFTTLK
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHH
TDIDRMKEKMIKLNHYYLLYKEERSYTKKVKFAKIRKLVLFRQMLATTSRALSTLKSLHR
HHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TENELRYMPEEFQESIQNELDSLTHYHEQVLLKFIGKAKKQQSVEMLDEVETGKQELIDI
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMEYQNKDDEEAYKTWLHLFPLISSIINYSEEVEHLDLLVDSFYTYHKPEKELQIDDKKE
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
DE
CC
>Mature Secondary Structure
MKLGARILKTGIAITLALFACILLQLPSPVFAGISAIFAVQPSVYRSYLTALEQIQANVI
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GAIFAIAFATAFGHNPFIIGLTCILVIALTLQLRLENTISIALVTVIAIMEYQGEDFFSF
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
ALLRFATIMIGIIAASLVNLVFMPPKYETKLYHRIVDNTEEIVKWIRMNSRQASDFTTLK
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHH
TDIDRMKEKMIKLNHYYLLYKEERSYTKKVKFAKIRKLVLFRQMLATTSRALSTLKSLHR
HHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TENELRYMPEEFQESIQNELDSLTHYHEQVLLKFIGKAKKQQSVEMLDEVETGKQELIDI
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMEYQNKDDEEAYKTWLHLFPLISSIINYSEEVEHLDLLVDSFYTYHKPEKELQIDDKKE
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
DE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9202460; 9384377 [H]