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The map label for this gene is yrhO [H]

Identifier: 218231452

GI number: 218231452

Start: 969768

End: 970553

Strand: Reverse

Name: yrhO [H]

Synonym: BCB4264_A0984

Alternate gene names: 218231452

Gene position: 970553-969768 (Counterclockwise)

Preceding gene: 218234486

Following gene: 218234008

Centisome position: 17.91

GC content: 35.24

Gene sequence:

>786_bases
GTGGACTACATAGTGCAACAGCTTAAAAAAATTGGTTTCAATGAATATGAAGCTAAATCTTATGTATCTCTTGTTAAACA
GGGGCCTGTCACAGCCTATCAAGTGAGTAAGGATTCGGGTGTCCCAAGAGCGCGAATTTATGAGATTTTAGGTAACCTTG
TAGAAAAAGGAATTGTCATGAAAGAAGAAATAAATGACACCACCCGCTATTCACCTCTACCTGTTGAAATCTTTTTACAG
AAAGCGCAAACAGAATGGCAATCTACTTACGAAGGAATAAGTGATTCATTAAAAAAACTAGAAACTTCCGAGGAAAAAAC
GGATAATCGAGTAATTACTTTAAAAGACAATCAAACAATCATTAGCTACTGTCAGACATTAATAAAAAAAGCAGAACGAC
GTATTGTCATTTCAATGTGGGATGAGATGTATGAAGCGTTAAAAGAAGATCTATCTGAAGTAGCTGATAAAGTTACAATA
CAAGGTATTACCCTACATGTTGAAAATCCCATTAAAAATCTAGAAGCCCATCGCATAACATCTTATACAGAAACCTTGTC
TACAGAACATTGGTTTATTTTATCGATAGATTCTAAAGAAATGATTTATGGACCATCACTTGAAGAGCGTAATATTGCTT
TTTATACAGATGACCCCGTTCATATATACTTATTAGAGGATTATGTATGGCATGATGTTTTAGTCAATCGACTTGTCCGA
CGTAGCCAAGATGACTTGCAGCAGTGGATTACTGCAGAGAGAAAGTCTTTCTTTATGGGGAAATAA

Upstream 100 bases:

>100_bases
TCCCCTTTAGTCACTATTGTAATAGTAACTATCAATTTGCTAAATGTAAAGAGTTATTGTAACGTTGAAATATAAAAGCA
AACATCGGAGGACGAAAAAA

Downstream 100 bases:

>100_bases
GAAGTATATTGAAAGAATCAAAGAATAAAGCATAAGTGAATGCAATAGAACACTTATGCTTTATTTTATTTGCAAAGTCA
TACTCAAGTCTTTCAACTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MDYIVQQLKKIGFNEYEAKSYVSLVKQGPVTAYQVSKDSGVPRARIYEILGNLVEKGIVMKEEINDTTRYSPLPVEIFLQ
KAQTEWQSTYEGISDSLKKLETSEEKTDNRVITLKDNQTIISYCQTLIKKAERRIVISMWDEMYEALKEDLSEVADKVTI
QGITLHVENPIKNLEAHRITSYTETLSTEHWFILSIDSKEMIYGPSLEERNIAFYTDDPVHIYLLEDYVWHDVLVNRLVR
RSQDDLQQWITAERKSFFMGK

Sequences:

>Translated_261_residues
MDYIVQQLKKIGFNEYEAKSYVSLVKQGPVTAYQVSKDSGVPRARIYEILGNLVEKGIVMKEEINDTTRYSPLPVEIFLQ
KAQTEWQSTYEGISDSLKKLETSEEKTDNRVITLKDNQTIISYCQTLIKKAERRIVISMWDEMYEALKEDLSEVADKVTI
QGITLHVENPIKNLEAHRITSYTETLSTEHWFILSIDSKEMIYGPSLEERNIAFYTDDPVHIYLLEDYVWHDVLVNRLVR
RSQDDLQQWITAERKSFFMGK
>Mature_261_residues
MDYIVQQLKKIGFNEYEAKSYVSLVKQGPVTAYQVSKDSGVPRARIYEILGNLVEKGIVMKEEINDTTRYSPLPVEIFLQ
KAQTEWQSTYEGISDSLKKLETSEEKTDNRVITLKDNQTIISYCQTLIKKAERRIVISMWDEMYEALKEDLSEVADKVTI
QGITLHVENPIKNLEAHRITSYTETLSTEHWFILSIDSKEMIYGPSLEERNIAFYTDDPVHIYLLEDYVWHDVLVNRLVR
RSQDDLQQWITAERKSFFMGK

Specific function: Unknown

COG id: COG1378

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021586
- InterPro:   IPR002831
- InterPro:   IPR011991 [H]

Pfam domain/function: PF11495 Regulator_TrmB; PF01978 TrmB [H]

EC number: NA

Molecular weight: Translated: 30489; Mature: 30489

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYIVQQLKKIGFNEYEAKSYVSLVKQGPVTAYQVSKDSGVPRARIYEILGNLVEKGIVM
CCHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCH
KEEINDTTRYSPLPVEIFLQKAQTEWQSTYEGISDSLKKLETSEEKTDNRVITLKDNQTI
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCEEEEEECCCHH
ISYCQTLIKKAERRIVISMWDEMYEALKEDLSEVADKVTIQGITLHVENPIKNLEAHRIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHHHHHH
SYTETLSTEHWFILSIDSKEMIYGPSLEERNIAFYTDDPVHIYLLEDYVWHDVLVNRLVR
HHHHHHCCCCEEEEEECCCCEEECCCCCCCCEEEEECCCEEEEEEHHHHHHHHHHHHHHH
RSQDDLQQWITAERKSFFMGK
CCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDYIVQQLKKIGFNEYEAKSYVSLVKQGPVTAYQVSKDSGVPRARIYEILGNLVEKGIVM
CCHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCH
KEEINDTTRYSPLPVEIFLQKAQTEWQSTYEGISDSLKKLETSEEKTDNRVITLKDNQTI
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCEEEEEECCCHH
ISYCQTLIKKAERRIVISMWDEMYEALKEDLSEVADKVTIQGITLHVENPIKNLEAHRIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHHHHHH
SYTETLSTEHWFILSIDSKEMIYGPSLEERNIAFYTDDPVHIYLLEDYVWHDVLVNRLVR
HHHHHHCCCCEEEEEECCCCEEECCCCCCCCEEEEECCCEEEEEEHHHHHHHHHHHHHHH
RSQDDLQQWITAERKSFFMGK
CCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]