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The map label for this gene is 218230928

Identifier: 218230928

GI number: 218230928

Start: 443096

End: 444409

Strand: Reverse

Name: 218230928

Synonym: BCB4264_A0459

Alternate gene names: NA

Gene position: 444409-443096 (Counterclockwise)

Preceding gene: 218233207

Following gene: 218231175

Centisome position: 8.2

GC content: 37.21

Gene sequence:

>1314_bases
ATGGATAAAGCATTAACAAACCATGTCATTATTTTATCATTCGACTGTTTATCAGCTTTAGATTTTCCTATACTACAAAA
ACTACCTCATTTCCAATCTCTAATAAAAAAGGGCACGGTTGTCGAAAAAGTAGAACCAATTTATCCTTCTGTAACATATC
CAAGCCACTCAACAATCGTAACCGGTAATTACCCTAACAAGCACGGTGTTGTTAGCAATACGTTACTTCAACCAGGGCGT
GAATCACCTGATTGGCATTGGTATCGAAAATCAATAAAAGGAACAACATTGTATGATGAAGCGCGCAAAGCAAATTTAAC
GACAGCTGCCCTTCTATGGCCTGTTACTGGAAGAGCGAACATCGATTACAATTTACCAGAAATTTTTCCAAATAGACCTT
GGCAAAATCAAGTGTTAGTTTCCTTATTTAGCGGTAGTCCACTATACCAATTAGATTTAAATCGTCGTTTCGGCCATATA
AGAAATGGTTTATCACAACCAGAGCTGGATGATTTCGTCCTCGCCTCTGCTGTGCATACAATCCAGACGAAAAAGCCTAA
TGTCATGTTCGTACATTTCACCGATTTAGACACACAAAGACACTATCACGGCTTTGAATCTAACGAAACAATAGCTGCTA
TCCAGAGACACGACGAACGTCTAGGGAAAATTATTCAAGCACTAAAAGAAAGTGACTTATACGAAGAAAGTACAATTATT
GCCCTTGGTGATCATAGCGCTTTAAGTGAAAACAAATCCATCCAATTAAATGTGCTATTCCATCAAAGAGGACTTATATC
TCTTAATAAAAAAGGAAAATTAGTAGACTGGAAAGCCTATTGCCAAAGTTGCGACGGCTCTGCCTATGTATATGTAAAGG
ACAAAAATGATACGGATACAATTCGGGAGGTACAACTACTCCTTGAAGAACTACTTCAAAATAAACAAAACGGAATTGAA
TTTATACTTCATGATGAAGCTGCCAAAGACTGCGGTGCAGACGGTAATTGTTTATTCATGTTAGAAGCACGAGAAGGATA
TTATTTCACTGAAAACTATACAGGAGATTTTATAAAAGAAATTACCGAAAAAGATGTTACGCCTAGTAAAAAATATACAT
TTGGTACGCATGGATACTCTCCAACAAAACCTAACTATGAAACAATTTTTATCGCTGCTGGGAAAGGGATAAAAAGCGGT
ATTACCATACCGTATATGAGACTTATTGATGAGGGCCCAACTATCGCTAGACTACTCGGTTTACACTTAGGTGAAACAGA
CGGATCAATTGTAGAGGATTTACTCCAATTGTAA

Upstream 100 bases:

>100_bases
GAAAATAAATAATAAATTTTCACCTAAAAAATATATTTTTATTACTAGGTATTAATAGTAATATATAAGAATAGGTTTTA
TATAATCAGGAGGGAACTTT

Downstream 100 bases:

>100_bases
AGAACTGTGTATATATGTAAAAGTTATGTAAAATTCATCATTGTTTCTCTTTTTATAATTTTTATTTTTGTACACTGTTA
GTAAAACAAATTTGAGGGGG

Product: type I phosphodiesterase/nucleotide pyrophosphatase family protein

Products: NA

Alternate protein names: Nucleotide Pyrophosphatase; Pyrophosphatase; Phosphodiesterase; Phosphoglyceromutase/Phosphopentomutase; Alkaline Phosphodiesterase I; AP Endonuclease; Phosphodiesterase/Nucleotide Pyrophosphatase Family Protein; Hydrolase; Nucleotide Diphosphatase

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MDKALTNHVIILSFDCLSALDFPILQKLPHFQSLIKKGTVVEKVEPIYPSVTYPSHSTIVTGNYPNKHGVVSNTLLQPGR
ESPDWHWYRKSIKGTTLYDEARKANLTTAALLWPVTGRANIDYNLPEIFPNRPWQNQVLVSLFSGSPLYQLDLNRRFGHI
RNGLSQPELDDFVLASAVHTIQTKKPNVMFVHFTDLDTQRHYHGFESNETIAAIQRHDERLGKIIQALKESDLYEESTII
ALGDHSALSENKSIQLNVLFHQRGLISLNKKGKLVDWKAYCQSCDGSAYVYVKDKNDTDTIREVQLLLEELLQNKQNGIE
FILHDEAAKDCGADGNCLFMLEAREGYYFTENYTGDFIKEITEKDVTPSKKYTFGTHGYSPTKPNYETIFIAAGKGIKSG
ITIPYMRLIDEGPTIARLLGLHLGETDGSIVEDLLQL

Sequences:

>Translated_437_residues
MDKALTNHVIILSFDCLSALDFPILQKLPHFQSLIKKGTVVEKVEPIYPSVTYPSHSTIVTGNYPNKHGVVSNTLLQPGR
ESPDWHWYRKSIKGTTLYDEARKANLTTAALLWPVTGRANIDYNLPEIFPNRPWQNQVLVSLFSGSPLYQLDLNRRFGHI
RNGLSQPELDDFVLASAVHTIQTKKPNVMFVHFTDLDTQRHYHGFESNETIAAIQRHDERLGKIIQALKESDLYEESTII
ALGDHSALSENKSIQLNVLFHQRGLISLNKKGKLVDWKAYCQSCDGSAYVYVKDKNDTDTIREVQLLLEELLQNKQNGIE
FILHDEAAKDCGADGNCLFMLEAREGYYFTENYTGDFIKEITEKDVTPSKKYTFGTHGYSPTKPNYETIFIAAGKGIKSG
ITIPYMRLIDEGPTIARLLGLHLGETDGSIVEDLLQL
>Mature_437_residues
MDKALTNHVIILSFDCLSALDFPILQKLPHFQSLIKKGTVVEKVEPIYPSVTYPSHSTIVTGNYPNKHGVVSNTLLQPGR
ESPDWHWYRKSIKGTTLYDEARKANLTTAALLWPVTGRANIDYNLPEIFPNRPWQNQVLVSLFSGSPLYQLDLNRRFGHI
RNGLSQPELDDFVLASAVHTIQTKKPNVMFVHFTDLDTQRHYHGFESNETIAAIQRHDERLGKIIQALKESDLYEESTII
ALGDHSALSENKSIQLNVLFHQRGLISLNKKGKLVDWKAYCQSCDGSAYVYVKDKNDTDTIREVQLLLEELLQNKQNGIE
FILHDEAAKDCGADGNCLFMLEAREGYYFTENYTGDFIKEITEKDVTPSKKYTFGTHGYSPTKPNYETIFIAAGKGIKSG
ITIPYMRLIDEGPTIARLLGLHLGETDGSIVEDLLQL

Specific function: Unknown

COG id: COG1524

COG function: function code R; Uncharacterized proteins of the AP superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI170650661, Length=227, Percent_Identity=25.9911894273128, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI115533128, Length=432, Percent_Identity=24.537037037037, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI212646262, Length=432, Percent_Identity=24.537037037037, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI115533126, Length=432, Percent_Identity=24.537037037037, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI115533132, Length=428, Percent_Identity=20.5607476635514, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115533130, Length=428, Percent_Identity=20.5607476635514, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49376; Mature: 49376

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKALTNHVIILSFDCLSALDFPILQKLPHFQSLIKKGTVVEKVEPIYPSVTYPSHSTIV
CCCCCCCCEEEEEEHHHHHCCCHHHHHCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCEEE
TGNYPNKHGVVSNTLLQPGRESPDWHWYRKSIKGTTLYDEARKANLTTAALLWPVTGRAN
ECCCCCCCCCHHHHHHCCCCCCCCHHHHHHHCCCCEEHHHHHHCCCEEEEEEEECCCCCC
IDYNLPEIFPNRPWQNQVLVSLFSGSPLYQLDLNRRFGHIRNGLSQPELDDFVLASAVHT
CCCCCHHHCCCCCCCCCEEEEEECCCCEEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHH
IQTKKPNVMFVHFTDLDTQRHYHGFESNETIAAIQRHDERLGKIIQALKESDLYEESTII
HCCCCCCEEEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
ALGDHSALSENKSIQLNVLFHQRGLISLNKKGKLVDWKAYCQSCDGSAYVYVKDKNDTDT
EECCCCCCCCCCCEEEEEEEECCCEEEECCCCCEEEHHHHHCCCCCCEEEEEECCCCHHH
IREVQLLLEELLQNKQNGIEFILHDEAAKDCGADGNCLFMLEAREGYYFTENYTGDFIKE
HHHHHHHHHHHHHCCCCCCEEEEECCHHHHCCCCCCEEEEEEECCCEEEECCCCHHHHHH
ITEKDVTPSKKYTFGTHGYSPTKPNYETIFIAAGKGIKSGITIPYMRLIDEGPTIARLLG
HHHCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCCHHHHHHH
LHLGETDGSIVEDLLQL
HHCCCCCCHHHHHHHHC
>Mature Secondary Structure
MDKALTNHVIILSFDCLSALDFPILQKLPHFQSLIKKGTVVEKVEPIYPSVTYPSHSTIV
CCCCCCCCEEEEEEHHHHHCCCHHHHHCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCEEE
TGNYPNKHGVVSNTLLQPGRESPDWHWYRKSIKGTTLYDEARKANLTTAALLWPVTGRAN
ECCCCCCCCCHHHHHHCCCCCCCCHHHHHHHCCCCEEHHHHHHCCCEEEEEEEECCCCCC
IDYNLPEIFPNRPWQNQVLVSLFSGSPLYQLDLNRRFGHIRNGLSQPELDDFVLASAVHT
CCCCCHHHCCCCCCCCCEEEEEECCCCEEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHH
IQTKKPNVMFVHFTDLDTQRHYHGFESNETIAAIQRHDERLGKIIQALKESDLYEESTII
HCCCCCCEEEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
ALGDHSALSENKSIQLNVLFHQRGLISLNKKGKLVDWKAYCQSCDGSAYVYVKDKNDTDT
EECCCCCCCCCCCEEEEEEEECCCEEEECCCCCEEEHHHHHCCCCCCEEEEEECCCCHHH
IREVQLLLEELLQNKQNGIEFILHDEAAKDCGADGNCLFMLEAREGYYFTENYTGDFIKE
HHHHHHHHHHHHHCCCCCCEEEEECCHHHHCCCCCCEEEEEEECCCEEEECCCCHHHHHH
ITEKDVTPSKKYTFGTHGYSPTKPNYETIFIAAGKGIKSGITIPYMRLIDEGPTIARLLG
HHHCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCCHHHHHHH
LHLGETDGSIVEDLLQL
HHCCCCCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA