| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is yfhP [C]
Identifier: 21674519
GI number: 21674519
Start: 1612574
End: 1613032
Strand: Reverse
Name: yfhP [C]
Synonym: CT1702
Alternate gene names: 21674519
Gene position: 1613032-1612574 (Counterclockwise)
Preceding gene: 21674520
Following gene: 21674518
Centisome position: 74.85
GC content: 54.25
Gene sequence:
>459_bases ATGAAGGTACTCAACAAAGAAACAGACTACGCCGTCCGGGCACTGATCTCTCTCGGGATGAAATCCGATGGATGGGTTTC GGCGAAGGTGATCTCCGACGAACAGGCGATTCCCTACCAGTTCCTGCGGCGCATCTTGCAGGAGCTGATCCGCAACGGGC TGGTGGAGTCGAAAGAGGGCGCTGGCGGCGGCGTGAAGCTCGCAAAAGAGCCTGGTGACATCGGTGTGGCCGATGTGATC GAAATCTTTCAGGGCAAGGTGCAGCTTTCGGAGTGCATGTTCCGCAAGCAGCTCTGCTCGAATCGTGCCAACTGTGTCTT GCGCCATGAGATCATGCGCATCGAAAAAATGGTGAATAACGAGTTCTCGCAAGTGACCATTGGCAAGCTGATCGACGATC TGAAGGCGGTGGAAGCGATGAATAAAACCAGACAGACAGAACAACAGGAAGCACGATGA
Upstream 100 bases:
>100_bases AGCGGATTTTTTTGCGAAAACAAAATCAACCGGGAATTTTTGCAATTCTATTGGTATTTTGATAAACTGATACTAAATTA GTATCAGAAATTCAGCGATT
Downstream 100 bases:
>100_bases AACGGCAGATCATAACCATAGATGAGAAAAAATGCACCGGCTGCGGCGATTGCATTCCGGCGTGCCCGGAAGGGGCGCTT CAGGTGATCGACGGCAAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MKVLNKETDYAVRALISLGMKSDGWVSAKVISDEQAIPYQFLRRILQELIRNGLVESKEGAGGGVKLAKEPGDIGVADVI EIFQGKVQLSECMFRKQLCSNRANCVLRHEIMRIEKMVNNEFSQVTIGKLIDDLKAVEAMNKTRQTEQQEAR
Sequences:
>Translated_152_residues MKVLNKETDYAVRALISLGMKSDGWVSAKVISDEQAIPYQFLRRILQELIRNGLVESKEGAGGGVKLAKEPGDIGVADVI EIFQGKVQLSECMFRKQLCSNRANCVLRHEIMRIEKMVNNEFSQVTIGKLIDDLKAVEAMNKTRQTEQQEAR >Mature_152_residues MKVLNKETDYAVRALISLGMKSDGWVSAKVISDEQAIPYQFLRRILQELIRNGLVESKEGAGGGVKLAKEPGDIGVADVI EIFQGKVQLSECMFRKQLCSNRANCVLRHEIMRIEKMVNNEFSQVTIGKLIDDLKAVEAMNKTRQTEQQEAR
Specific function: Unknown
COG id: COG1959
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000944 [H]
Pfam domain/function: PF02082 Rrf2 [H]
EC number: NA
Molecular weight: Translated: 17097; Mature: 17097
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: PS01332 UPF0074
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLNKETDYAVRALISLGMKSDGWVSAKVISDEQAIPYQFLRRILQELIRNGLVESKEG CCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCC AGGGVKLAKEPGDIGVADVIEIFQGKVQLSECMFRKQLCSNRANCVLRHEIMRIEKMVNN CCCCCEECCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC EFSQVTIGKLIDDLKAVEAMNKTRQTEQQEAR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKVLNKETDYAVRALISLGMKSDGWVSAKVISDEQAIPYQFLRRILQELIRNGLVESKEG CCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCC AGGGVKLAKEPGDIGVADVIEIFQGKVQLSECMFRKQLCSNRANCVLRHEIMRIEKMVNN CCCCCEECCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC EFSQVTIGKLIDDLKAVEAMNKTRQTEQQEAR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]