| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674390
Identifier: 21674390
GI number: 21674390
Start: 1481471
End: 1482406
Strand: Reverse
Name: 21674390
Synonym: CT1572
Alternate gene names: NA
Gene position: 1482406-1481471 (Counterclockwise)
Preceding gene: 21674391
Following gene: 21674386
Centisome position: 68.79
GC content: 60.58
Gene sequence:
>936_bases ATGGCGTTCCGGGGTTGGAAGAAGCTGCCGATCCGTATCGAGACGGGCGAAATGGTCGAGGCGATTGCTCCGGTGATCGT TTCGGCCAGCCGTGCCACAGACATTCCGGCGTTTCACGCCGAATGGTTTATGACGCGGCTCCGTGCCGGTTACGTGCAGT GGTGTAATCCCTTCAACGCCCGGCAGACGCAATACGTCTCGTTCCGTAAAACGCGAGCTGTGATTTTCTGGAGCAAGAAC CCCGCTCCGCTGCTACCGCACCTCTCCGAGCTCGATGCCATTGGCATCAACTACTCCTTCCAGTTTACCCTGAACGACTA CGAAGCGGAAGGTCTCGAACCGTACGTGCTGCCGCTCGCCAAACGGATCGAGACCTTCCGGCGGCTTGCTTCGCACATCG GCCCCGAGCGCGTCGTTTGGCGTTTCGATCCGCTCGTGCTGACCGGTCGACTCACTGCCGACATGCTGCTGGAGAGGATC GGGCGTCTTGCCGAAGCGTTGGGCGGCCAGACCCGCAAGCTCGTCATCAGCTTTGCCGACATTGAGTGCTACCGGGCGGT GCGTCTTCGTCTGTCACGCATGGGCGCAGGCGCTCGCGAGTTCGCGCCGGAGGAGATGGACGAGTTCGCCGCCCGGCTGG TCGAGCGCAACAAGGATTGGGGACTCGAACTCTCCGCCTGCGCAGAGGATAGCGAACTGGCGGGGATTGCAAAAAGTAGG TGTATCGATGGCCATGTGCTGGCGAGCTGCTTTGGCGACGACGCTGAACTGATGGAATTTCTTGGCGGCAGCACCCTTTT TCCGGGTGATGCGCCAGTCAGCGTTGCGCTGAAGCATCAAGGGCAGCGCAAAGCCTGCGGCTGCATCGTGAGCAAGGATA TCGGCGTGTATGGCACTTGCCAGCATGGTTGCCGTTACTGTTATGCGTGCCGATAG
Upstream 100 bases:
>100_bases GTTCGGTGGCGTGAAACAGTCGGGCTATGGACGCGAGCTGTCGCACCACGGCATCCGCGAGTTTGTCAACATCAAGACTT TTTATCTGCCCTGAGTCGCA
Downstream 100 bases:
>100_bases CCGTAGTATTGTATTGGGGTGGGATGGCGTAAAAGCAAACCGGGGTGTTCATTGCACCCCGGTGGTTCGATTCGTATGGT GTCTGTCAGGTGTCAGCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MAFRGWKKLPIRIETGEMVEAIAPVIVSASRATDIPAFHAEWFMTRLRAGYVQWCNPFNARQTQYVSFRKTRAVIFWSKN PAPLLPHLSELDAIGINYSFQFTLNDYEAEGLEPYVLPLAKRIETFRRLASHIGPERVVWRFDPLVLTGRLTADMLLERI GRLAEALGGQTRKLVISFADIECYRAVRLRLSRMGAGAREFAPEEMDEFAARLVERNKDWGLELSACAEDSELAGIAKSR CIDGHVLASCFGDDAELMEFLGGSTLFPGDAPVSVALKHQGQRKACGCIVSKDIGVYGTCQHGCRYCYACR
Sequences:
>Translated_311_residues MAFRGWKKLPIRIETGEMVEAIAPVIVSASRATDIPAFHAEWFMTRLRAGYVQWCNPFNARQTQYVSFRKTRAVIFWSKN PAPLLPHLSELDAIGINYSFQFTLNDYEAEGLEPYVLPLAKRIETFRRLASHIGPERVVWRFDPLVLTGRLTADMLLERI GRLAEALGGQTRKLVISFADIECYRAVRLRLSRMGAGAREFAPEEMDEFAARLVERNKDWGLELSACAEDSELAGIAKSR CIDGHVLASCFGDDAELMEFLGGSTLFPGDAPVSVALKHQGQRKACGCIVSKDIGVYGTCQHGCRYCYACR >Mature_310_residues AFRGWKKLPIRIETGEMVEAIAPVIVSASRATDIPAFHAEWFMTRLRAGYVQWCNPFNARQTQYVSFRKTRAVIFWSKNP APLLPHLSELDAIGINYSFQFTLNDYEAEGLEPYVLPLAKRIETFRRLASHIGPERVVWRFDPLVLTGRLTADMLLERIG RLAEALGGQTRKLVISFADIECYRAVRLRLSRMGAGAREFAPEEMDEFAARLVERNKDWGLELSACAEDSELAGIAKSRC IDGHVLASCFGDDAELMEFLGGSTLFPGDAPVSVALKHQGQRKACGCIVSKDIGVYGTCQHGCRYCYACR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34835; Mature: 34703
Theoretical pI: Translated: 7.86; Mature: 7.86
Prosite motif: PS00732 RIBOSOMAL_S16
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFRGWKKLPIRIETGEMVEAIAPVIVSASRATDIPAFHAEWFMTRLRAGYVQWCNPFNA CCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC RQTQYVSFRKTRAVIFWSKNPAPLLPHLSELDAIGINYSFQFTLNDYEAEGLEPYVLPLA CCHHHEEEEEEEEEEEECCCCCCCCCCHHHHCEEECCEEEEEEEECCCCCCCCHHHHHHH KRIETFRRLASHIGPERVVWRFDPLVLTGRLTADMLLERIGRLAEALGGQTRKLVISFAD HHHHHHHHHHHHCCCCCEEEEECCEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEEHH IECYRAVRLRLSRMGAGAREFAPEEMDEFAARLVERNKDWGLELSACAEDSELAGIAKSR HHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHH CIDGHVLASCFGDDAELMEFLGGSTLFPGDAPVSVALKHQGQRKACGCIVSKDIGVYGTC CCCCHHHHHHCCCHHHHHHHHCCCEECCCCCCEEEEECCCCCCHHHCEEEECCCCCEEEH QHGCRYCYACR HHCCCEEECCC >Mature Secondary Structure AFRGWKKLPIRIETGEMVEAIAPVIVSASRATDIPAFHAEWFMTRLRAGYVQWCNPFNA CCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC RQTQYVSFRKTRAVIFWSKNPAPLLPHLSELDAIGINYSFQFTLNDYEAEGLEPYVLPLA CCHHHEEEEEEEEEEEECCCCCCCCCCHHHHCEEECCEEEEEEEECCCCCCCCHHHHHHH KRIETFRRLASHIGPERVVWRFDPLVLTGRLTADMLLERIGRLAEALGGQTRKLVISFAD HHHHHHHHHHHHCCCCCEEEEECCEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEEHH IECYRAVRLRLSRMGAGAREFAPEEMDEFAARLVERNKDWGLELSACAEDSELAGIAKSR HHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHH CIDGHVLASCFGDDAELMEFLGGSTLFPGDAPVSVALKHQGQRKACGCIVSKDIGVYGTC CCCCHHHHHHCCCHHHHHHHHCCCEECCCCCCEEEEECCCCCCHHHCEEEECCCCCEEEH QHGCRYCYACR HHCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA