Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21674390

Identifier: 21674390

GI number: 21674390

Start: 1481471

End: 1482406

Strand: Reverse

Name: 21674390

Synonym: CT1572

Alternate gene names: NA

Gene position: 1482406-1481471 (Counterclockwise)

Preceding gene: 21674391

Following gene: 21674386

Centisome position: 68.79

GC content: 60.58

Gene sequence:

>936_bases
ATGGCGTTCCGGGGTTGGAAGAAGCTGCCGATCCGTATCGAGACGGGCGAAATGGTCGAGGCGATTGCTCCGGTGATCGT
TTCGGCCAGCCGTGCCACAGACATTCCGGCGTTTCACGCCGAATGGTTTATGACGCGGCTCCGTGCCGGTTACGTGCAGT
GGTGTAATCCCTTCAACGCCCGGCAGACGCAATACGTCTCGTTCCGTAAAACGCGAGCTGTGATTTTCTGGAGCAAGAAC
CCCGCTCCGCTGCTACCGCACCTCTCCGAGCTCGATGCCATTGGCATCAACTACTCCTTCCAGTTTACCCTGAACGACTA
CGAAGCGGAAGGTCTCGAACCGTACGTGCTGCCGCTCGCCAAACGGATCGAGACCTTCCGGCGGCTTGCTTCGCACATCG
GCCCCGAGCGCGTCGTTTGGCGTTTCGATCCGCTCGTGCTGACCGGTCGACTCACTGCCGACATGCTGCTGGAGAGGATC
GGGCGTCTTGCCGAAGCGTTGGGCGGCCAGACCCGCAAGCTCGTCATCAGCTTTGCCGACATTGAGTGCTACCGGGCGGT
GCGTCTTCGTCTGTCACGCATGGGCGCAGGCGCTCGCGAGTTCGCGCCGGAGGAGATGGACGAGTTCGCCGCCCGGCTGG
TCGAGCGCAACAAGGATTGGGGACTCGAACTCTCCGCCTGCGCAGAGGATAGCGAACTGGCGGGGATTGCAAAAAGTAGG
TGTATCGATGGCCATGTGCTGGCGAGCTGCTTTGGCGACGACGCTGAACTGATGGAATTTCTTGGCGGCAGCACCCTTTT
TCCGGGTGATGCGCCAGTCAGCGTTGCGCTGAAGCATCAAGGGCAGCGCAAAGCCTGCGGCTGCATCGTGAGCAAGGATA
TCGGCGTGTATGGCACTTGCCAGCATGGTTGCCGTTACTGTTATGCGTGCCGATAG

Upstream 100 bases:

>100_bases
GTTCGGTGGCGTGAAACAGTCGGGCTATGGACGCGAGCTGTCGCACCACGGCATCCGCGAGTTTGTCAACATCAAGACTT
TTTATCTGCCCTGAGTCGCA

Downstream 100 bases:

>100_bases
CCGTAGTATTGTATTGGGGTGGGATGGCGTAAAAGCAAACCGGGGTGTTCATTGCACCCCGGTGGTTCGATTCGTATGGT
GTCTGTCAGGTGTCAGCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MAFRGWKKLPIRIETGEMVEAIAPVIVSASRATDIPAFHAEWFMTRLRAGYVQWCNPFNARQTQYVSFRKTRAVIFWSKN
PAPLLPHLSELDAIGINYSFQFTLNDYEAEGLEPYVLPLAKRIETFRRLASHIGPERVVWRFDPLVLTGRLTADMLLERI
GRLAEALGGQTRKLVISFADIECYRAVRLRLSRMGAGAREFAPEEMDEFAARLVERNKDWGLELSACAEDSELAGIAKSR
CIDGHVLASCFGDDAELMEFLGGSTLFPGDAPVSVALKHQGQRKACGCIVSKDIGVYGTCQHGCRYCYACR

Sequences:

>Translated_311_residues
MAFRGWKKLPIRIETGEMVEAIAPVIVSASRATDIPAFHAEWFMTRLRAGYVQWCNPFNARQTQYVSFRKTRAVIFWSKN
PAPLLPHLSELDAIGINYSFQFTLNDYEAEGLEPYVLPLAKRIETFRRLASHIGPERVVWRFDPLVLTGRLTADMLLERI
GRLAEALGGQTRKLVISFADIECYRAVRLRLSRMGAGAREFAPEEMDEFAARLVERNKDWGLELSACAEDSELAGIAKSR
CIDGHVLASCFGDDAELMEFLGGSTLFPGDAPVSVALKHQGQRKACGCIVSKDIGVYGTCQHGCRYCYACR
>Mature_310_residues
AFRGWKKLPIRIETGEMVEAIAPVIVSASRATDIPAFHAEWFMTRLRAGYVQWCNPFNARQTQYVSFRKTRAVIFWSKNP
APLLPHLSELDAIGINYSFQFTLNDYEAEGLEPYVLPLAKRIETFRRLASHIGPERVVWRFDPLVLTGRLTADMLLERIG
RLAEALGGQTRKLVISFADIECYRAVRLRLSRMGAGAREFAPEEMDEFAARLVERNKDWGLELSACAEDSELAGIAKSRC
IDGHVLASCFGDDAELMEFLGGSTLFPGDAPVSVALKHQGQRKACGCIVSKDIGVYGTCQHGCRYCYACR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34835; Mature: 34703

Theoretical pI: Translated: 7.86; Mature: 7.86

Prosite motif: PS00732 RIBOSOMAL_S16

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFRGWKKLPIRIETGEMVEAIAPVIVSASRATDIPAFHAEWFMTRLRAGYVQWCNPFNA
CCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
RQTQYVSFRKTRAVIFWSKNPAPLLPHLSELDAIGINYSFQFTLNDYEAEGLEPYVLPLA
CCHHHEEEEEEEEEEEECCCCCCCCCCHHHHCEEECCEEEEEEEECCCCCCCCHHHHHHH
KRIETFRRLASHIGPERVVWRFDPLVLTGRLTADMLLERIGRLAEALGGQTRKLVISFAD
HHHHHHHHHHHHCCCCCEEEEECCEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEEHH
IECYRAVRLRLSRMGAGAREFAPEEMDEFAARLVERNKDWGLELSACAEDSELAGIAKSR
HHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHH
CIDGHVLASCFGDDAELMEFLGGSTLFPGDAPVSVALKHQGQRKACGCIVSKDIGVYGTC
CCCCHHHHHHCCCHHHHHHHHCCCEECCCCCCEEEEECCCCCCHHHCEEEECCCCCEEEH
QHGCRYCYACR
HHCCCEEECCC
>Mature Secondary Structure 
AFRGWKKLPIRIETGEMVEAIAPVIVSASRATDIPAFHAEWFMTRLRAGYVQWCNPFNA
CCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
RQTQYVSFRKTRAVIFWSKNPAPLLPHLSELDAIGINYSFQFTLNDYEAEGLEPYVLPLA
CCHHHEEEEEEEEEEEECCCCCCCCCCHHHHCEEECCEEEEEEEECCCCCCCCHHHHHHH
KRIETFRRLASHIGPERVVWRFDPLVLTGRLTADMLLERIGRLAEALGGQTRKLVISFAD
HHHHHHHHHHHHCCCCCEEEEECCEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEEHH
IECYRAVRLRLSRMGAGAREFAPEEMDEFAARLVERNKDWGLELSACAEDSELAGIAKSR
HHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHH
CIDGHVLASCFGDDAELMEFLGGSTLFPGDAPVSVALKHQGQRKACGCIVSKDIGVYGTC
CCCCHHHHHHCCCHHHHHHHHCCCEECCCCCCEEEEECCCCCCHHHCEEEECCCCCEEEH
QHGCRYCYACR
HHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA