| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673780
Identifier: 21673780
GI number: 21673780
Start: 899101
End: 899571
Strand: Reverse
Name: 21673780
Synonym: CT0952
Alternate gene names: NA
Gene position: 899571-899101 (Counterclockwise)
Preceding gene: 21673783
Following gene: 21673759
Centisome position: 41.74
GC content: 57.11
Gene sequence:
>471_bases ATGACACCTCTTCTCTTTTTTATAGCGACCATCATCTTCGCCGCCGGAGCGGGAGCAGGAGCTTTTCTTGTCAACGCTTT CCGCAACAAACAGGAGAACGTCTGCCGTGGCAGCGTGCGCATCGGCCCATCGACGGTCGCCGGACGCGGCGCATTCGCGC TCACTCCGATCAAGGAAGGTGACATCATCGAGCGCTGCCCGGCACTCGAAGTGACCGACAAGGACATCGGCGGCGAACTG CTCAACTACGTTTTTTACGGCAGCGCCGAAGACCGCCGGCTCATTGCGATGGGCTACGGCATGATGTTCAACCACTCCTC AAACCCCAACGTCGCCTACTACCGCGAAGATACCCCGACCGGCCCCGAACTGATCATCTACGCCCTGCGAAACATCGCCG AAGGCGAAGAGATGTACTACAACTACGGCGACGACTGGTGGAAAACAAGAGGCGAAAAATCAGATTTTTGA
Upstream 100 bases:
>100_bases GATCTGCCGGAGAAAACATTCCTGATTGCTCCGGCAGCCGCCCGATGAATTCAATCATGAGATTCGTATTTTCAGCTTTT CCATCGACAGCTGGAATCGC
Downstream 100 bases:
>100_bases CAGTTGACTATGGGAAATTGAATTCTTGAGCGCAACAAATCAAGGGTGGCCGCCAAAACGCCTTTCGGGGTTCGGACTTT GCTCTTCCCAAACTATCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MTPLLFFIATIIFAAGAGAGAFLVNAFRNKQENVCRGSVRIGPSTVAGRGAFALTPIKEGDIIERCPALEVTDKDIGGEL LNYVFYGSAEDRRLIAMGYGMMFNHSSNPNVAYYREDTPTGPELIIYALRNIAEGEEMYYNYGDDWWKTRGEKSDF
Sequences:
>Translated_156_residues MTPLLFFIATIIFAAGAGAGAFLVNAFRNKQENVCRGSVRIGPSTVAGRGAFALTPIKEGDIIERCPALEVTDKDIGGEL LNYVFYGSAEDRRLIAMGYGMMFNHSSNPNVAYYREDTPTGPELIIYALRNIAEGEEMYYNYGDDWWKTRGEKSDF >Mature_155_residues TPLLFFIATIIFAAGAGAGAFLVNAFRNKQENVCRGSVRIGPSTVAGRGAFALTPIKEGDIIERCPALEVTDKDIGGELL NYVFYGSAEDRRLIAMGYGMMFNHSSNPNVAYYREDTPTGPELIIYALRNIAEGEEMYYNYGDDWWKTRGEKSDF
Specific function: Unknown
COG id: COG2940
COG function: function code R; Proteins containing SET domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17313; Mature: 17182
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS50280 SET
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLLFFIATIIFAAGAGAGAFLVNAFRNKQENVCRGSVRIGPSTVAGRGAFALTPIKEG CCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHCCCEEECCCCCCCCCCEEECCCCCC DIIERCPALEVTDKDIGGELLNYVFYGSAEDRRLIAMGYGMMFNHSSNPNVAYYREDTPT CHHHHCCCCCCCCCCCCHHHHHHHEECCCCCCEEEEEECCEEEECCCCCCEEEEECCCCC GPELIIYALRNIAEGEEMYYNYGDDWWKTRGEKSDF CHHHHHHHHHHHCCCCCEEECCCCHHHHCCCCCCCC >Mature Secondary Structure TPLLFFIATIIFAAGAGAGAFLVNAFRNKQENVCRGSVRIGPSTVAGRGAFALTPIKEG CHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHCCCEEECCCCCCCCCCEEECCCCCC DIIERCPALEVTDKDIGGELLNYVFYGSAEDRRLIAMGYGMMFNHSSNPNVAYYREDTPT CHHHHCCCCCCCCCCCCHHHHHHHEECCCCCCEEEEEECCEEEECCCCCCEEEEECCCCC GPELIIYALRNIAEGEEMYYNYGDDWWKTRGEKSDF CHHHHHHHHHHHCCCCCEEECCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA