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The map label for this gene is ycfU

Identifier: 21672562

GI number: 21672562

Start: 325580

End: 326779

Strand: Direct

Name: ycfU

Synonym: BUsg284

Alternate gene names: 21672562

Gene position: 325580-326779 (Clockwise)

Preceding gene: 21672560

Following gene: 21672563

Centisome position: 50.76

GC content: 18.5

Gene sequence:

>1200_bases
ATGTATAAGCCTATATATATATTTATTGGTTTACGTTATCTCTGGAATCCTTATTTACCAAATTTTAAAAAAATTATTAT
TATTCTATCAATTTTAGGTATAGGTATCGGCATATCTTCAACTATTATCACCATATCTATAATGAATGGATTTCAAAATA
AATTTAAAAATGACATTTTATCTTTTATTCCTCATATAATTATTACTAATAAAAATCGCAATATTAACAAATTAAATTTT
CCTAAAGAAACTTTAAAATTAAAAAACGTTGAAGAAATTACTGATTTTATCAGTAAAAAGGTCATTATTGAAAATAAAAA
TGAAATTAATATAGGAGAGATCATTGGTATTAACATAAAGAATGAAAAAAATTTAGAAAATTATAACATAAAAAAATTTT
TACATACTCTTCATTCAAGAAAATATAACGCAATTATAGGAAGCGAACTAGCTAAAAAAATGCATGTTAATATTAATGAT
CAAATTAAATTGATTGTTTTACCCATTAGTAAAAAAAAATTTTTACAAAATGATCTCAATATAAAATTATTTAAAATAAC
TGGTATATTCTCAACTAATAGTGAAATTGATGAGTATCAAATACTGATTAATAAAAAAAATGCTTTAAATTTTTTAAATT
ATAATAAAAATTATATCACTGGTTGGAAAATAAAGTTAAAAGACCCATTTATTCTAAATATTCAAAAAATAAAAAAATTA
AATAAAAATTTTATTATATTAGATTGGAAAACAAAAAAAGGTGAATTATTTAAGGCAATGAAAATTGAAAAATATATTAT
GTTATTTTTTTTTATTTTAATTTTATTAGTGTCAAGTTTTAATATAGTTATATCATTAACAATGAATGTATTAGATAAAA
AAAATAATATTTCAATTTTTCAATCTCAAGGATTATCTCGTTATAAAATAATGTTGATATTTATTATTTTAGGTTCAACT
ATTTCTATAGTGGGAAATTCATTTGGAACAATAATTAGCATTATATTAATCTTTCAAAAAGATTTTTTAAATTTTTTAAT
TAAAATATTTTTTATTGATATTGAAATTCCTATAGAAATTTCTCTCATTCAAATTTTAACAATCAATATTACATTTATAT
TTCTTACTATTTTATCAACGTTATATCCAATTTGGTATGCTATTAAATCTACTCCATCTAGAATTTTATCTGATGAATAA

Upstream 100 bases:

>100_bases
ACATATATTTTTTAAAACTATTTATTAAATATGATAACATGTAGTTTAAAATACCCCATTATGCAATTAATATAAATAAA
TTTAAGTTAAATTTACTAAA

Downstream 100 bases:

>100_bases
CAATATAATTTTACAGTGTATTAATTTAACAAAATCCTTTTACAGAAAAAAAGAAGAAATAAGAACATTAAATAAAATAT
CATTAAAAATTAGAAAAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MYKPIYIFIGLRYLWNPYLPNFKKIIIILSILGIGIGISSTIITISIMNGFQNKFKNDILSFIPHIIITNKNRNINKLNF
PKETLKLKNVEEITDFISKKVIIENKNEINIGEIIGINIKNEKNLENYNIKKFLHTLHSRKYNAIIGSELAKKMHVNIND
QIKLIVLPISKKKFLQNDLNIKLFKITGIFSTNSEIDEYQILINKKNALNFLNYNKNYITGWKIKLKDPFILNIQKIKKL
NKNFIILDWKTKKGELFKAMKIEKYIMLFFFILILLVSSFNIVISLTMNVLDKKNNISIFQSQGLSRYKIMLIFIILGST
ISIVGNSFGTIISIILIFQKDFLNFLIKIFFIDIEIPIEISLIQILTINITFIFLTILSTLYPIWYAIKSTPSRILSDE

Sequences:

>Translated_399_residues
MYKPIYIFIGLRYLWNPYLPNFKKIIIILSILGIGIGISSTIITISIMNGFQNKFKNDILSFIPHIIITNKNRNINKLNF
PKETLKLKNVEEITDFISKKVIIENKNEINIGEIIGINIKNEKNLENYNIKKFLHTLHSRKYNAIIGSELAKKMHVNIND
QIKLIVLPISKKKFLQNDLNIKLFKITGIFSTNSEIDEYQILINKKNALNFLNYNKNYITGWKIKLKDPFILNIQKIKKL
NKNFIILDWKTKKGELFKAMKIEKYIMLFFFILILLVSSFNIVISLTMNVLDKKNNISIFQSQGLSRYKIMLIFIILGST
ISIVGNSFGTIISIILIFQKDFLNFLIKIFFIDIEIPIEISLIQILTINITFIFLTILSTLYPIWYAIKSTPSRILSDE
>Mature_399_residues
MYKPIYIFIGLRYLWNPYLPNFKKIIIILSILGIGIGISSTIITISIMNGFQNKFKNDILSFIPHIIITNKNRNINKLNF
PKETLKLKNVEEITDFISKKVIIENKNEINIGEIIGINIKNEKNLENYNIKKFLHTLHSRKYNAIIGSELAKKMHVNIND
QIKLIVLPISKKKFLQNDLNIKLFKITGIFSTNSEIDEYQILINKKNALNFLNYNKNYITGWKIKLKDPFILNIQKIKKL
NKNFIILDWKTKKGELFKAMKIEKYIMLFFFILILLVSSFNIVISLTMNVLDKKNNISIFQSQGLSRYKIMLIFIILGST
ISIVGNSFGTIISIILIFQKDFLNFLIKIFFIDIEIPIEISLIQILTINITFIFLTILSTLYPIWYAIKSTPSRILSDE

Specific function: Part of an ATP-dependent transport system responsible for the release of lipoproteins targeted to the outer membrane from the inner membrane. Such a release is dependent of the sorting-signal (absence of an Asp at position 2 of the mature lipoprotein) and

COG id: COG4591

COG function: function code M; ABC-type transport system, involved in lipoprotein release, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family. LolC/E subfamily

Homologues:

Organism=Escherichia coli, GI1787360, Length=401, Percent_Identity=31.4214463840399, Blast_Score=256, Evalue=1e-69,
Organism=Escherichia coli, GI1787362, Length=419, Percent_Identity=23.3890214797136, Blast_Score=117, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LOLC_BUCAP (Q8K9N8)

Other databases:

- EMBL:   AE013218
- RefSeq:   NP_660629.1
- EnsemblBacteria:   EBBUCT00000000492
- GeneID:   1005488
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg284
- GeneTree:   EBGT00050000008112
- HOGENOM:   HBG675801
- OMA:   RAAKIQP
- ProtClustDB:   CLSK315866
- BioCyc:   BAPH198804:BUSG284-MONOMER
- GO:   GO:0006810
- InterPro:   IPR003838

Pfam domain/function: PF02687 FtsX

EC number: NA

Molecular weight: Translated: 46487; Mature: 46487

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xbb368e4)-; HASH(0xbff5a4c)-; HASH(0xc605730)-; HASH(0xae61824)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKPIYIFIGLRYLWNPYLPNFKKIIIILSILGIGIGISSTIITISIMNGFQNKFKNDIL
CCCCEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHH
SFIPHIIITNKNRNINKLNFPKETLKLKNVEEITDFISKKVIIENKNEINIGEIIGINIK
HHCCEEEEECCCCCCCCCCCCHHHHHCCCHHHHHHHHHCEEEEECCCCCCCCEEEEEEEC
NEKNLENYNIKKFLHTLHSRKYNAIIGSELAKKMHVNINDQIKLIVLPISKKKFLQNDLN
CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHCCCCC
IKLFKITGIFSTNSEIDEYQILINKKNALNFLNYNKNYITGWKIKLKDPFILNIQKIKKL
EEEEEEEEEEECCCCCCEEEEEEECCCCEEEEECCCCEEEEEEEEECCCEEEEHHHHHHC
NKNFIILDWKTKKGELFKAMKIEKYIMLFFFILILLVSSFNIVISLTMNVLDKKNNISIF
CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCEEEE
QSQGLSRYKIMLIFIILGSTISIVGNSFGTIISIILIFQKDFLNFLIKIFFIDIEIPIEI
ECCCCCHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCEEE
SLIQILTINITFIFLTILSTLYPIWYAIKSTPSRILSDE
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCH
>Mature Secondary Structure
MYKPIYIFIGLRYLWNPYLPNFKKIIIILSILGIGIGISSTIITISIMNGFQNKFKNDIL
CCCCEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHH
SFIPHIIITNKNRNINKLNFPKETLKLKNVEEITDFISKKVIIENKNEINIGEIIGINIK
HHCCEEEEECCCCCCCCCCCCHHHHHCCCHHHHHHHHHCEEEEECCCCCCCCEEEEEEEC
NEKNLENYNIKKFLHTLHSRKYNAIIGSELAKKMHVNINDQIKLIVLPISKKKFLQNDLN
CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHCCCCC
IKLFKITGIFSTNSEIDEYQILINKKNALNFLNYNKNYITGWKIKLKDPFILNIQKIKKL
EEEEEEEEEEECCCCCCEEEEEEECCCCEEEEECCCCEEEEEEEEECCCEEEEHHHHHHC
NKNFIILDWKTKKGELFKAMKIEKYIMLFFFILILLVSSFNIVISLTMNVLDKKNNISIF
CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCEEEE
QSQGLSRYKIMLIFIILGSTISIVGNSFGTIISIILIFQKDFLNFLIKIFFIDIEIPIEI
ECCCCCHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCEEE
SLIQILTINITFIFLTILSTLYPIWYAIKSTPSRILSDE
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12089438