Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
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Accession | NC_004061 |
Length | 641,454 |
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The map label for this gene is fabZ
Identifier: 21672513
GI number: 21672513
Start: 264145
End: 264603
Strand: Direct
Name: fabZ
Synonym: BUsg232
Alternate gene names: 21672513
Gene position: 264145-264603 (Clockwise)
Preceding gene: 21672512
Following gene: 21672514
Centisome position: 41.18
GC content: 23.97
Gene sequence:
>459_bases TTGAATTCTGATGAATATATTTTTAATATTAAAGATATTTTAAATATTTTACCGCATCGCTATCCTTTTTTACTTATTGA TCGGATTTTAGATTTTAAAGCATTTCAATATTTAAAAGCACTTAAAAACTGTACTGTAAATGAACCTTTTTTTCAAGGTC ATTTTATAAAAGAACCTGTTTTTCCTGGTGTTTTAATGATTGAAGCTATGAGTCAAGCGGCTGCTGTTTTGATTTTTAAA AGCATAGGTAAATTGAATATTAATCAGTTGTACTACTTCGTAGGTATTGAGAATACGCGATTTAAAAAAATTGTAGTGCC TGGTGATCAAATATTTATTGAAGTAATATACCTAAAGTCTAAAAAAAACTTTATAAAATTTAAAATTTTTGCCATAGTGA ATAAAAAGAATGTTTGTAAATCTACAATAATTTTTTATAAAAAAAATATCTTTAATTGA
Upstream 100 bases:
>100_bases ATTTAACTTTGGAAAAAATTGGTAATTAGAATAAAGTTTAATGTTTAGTATTAATTTTATAAAAAATAAAAATATTGTTT TTTTTAAATAGGAAAAAATT
Downstream 100 bases:
>100_bases AAAGATGTTGATATAATTTTTAGGAAATTCAATGAATTTAGAAGAATTTGTACATCTTCACGTACACAGCGATTATTCAA TTGTTGATGGATTGTCTAAA
Product: (3R)-hydroxymyristoyl-ACP dehydratase
Products: NA
Alternate protein names: (3R)-hydroxymyristoyl ACP dehydrase
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MNSDEYIFNIKDILNILPHRYPFLLIDRILDFKAFQYLKALKNCTVNEPFFQGHFIKEPVFPGVLMIEAMSQAAAVLIFK SIGKLNINQLYYFVGIENTRFKKIVVPGDQIFIEVIYLKSKKNFIKFKIFAIVNKKNVCKSTIIFYKKNIFN
Sequences:
>Translated_152_residues MNSDEYIFNIKDILNILPHRYPFLLIDRILDFKAFQYLKALKNCTVNEPFFQGHFIKEPVFPGVLMIEAMSQAAAVLIFK SIGKLNINQLYYFVGIENTRFKKIVVPGDQIFIEVIYLKSKKNFIKFKIFAIVNKKNVCKSTIIFYKKNIFN >Mature_152_residues MNSDEYIFNIKDILNILPHRYPFLLIDRILDFKAFQYLKALKNCTVNEPFFQGHFIKEPVFPGVLMIEAMSQAAAVLIFK SIGKLNINQLYYFVGIENTRFKKIVVPGDQIFIEVIYLKSKKNFIKFKIFAIVNKKNVCKSTIIFYKKNIFN
Specific function: Involved in saturated fatty acids biosynthesis
COG id: COG0764
COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioester dehydratase family. FabZ subfamily
Homologues:
Organism=Escherichia coli, GI1786377, Length=149, Percent_Identity=50.3355704697987, Blast_Score=182, Evalue=1e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FABZ_BUCAP (Q8K9S4)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660580.1 - ProteinModelPortal: Q8K9S4 - SMR: Q8K9S4 - EnsemblBacteria: EBBUCT00000000170 - GeneID: 1005432 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg232 - GeneTree: EBGT00050000007728 - HOGENOM: HBG433282 - OMA: NVSANES - ProtClustDB: PRK00006 - BioCyc: BAPH198804:BUSG232-MONOMER - GO: GO:0005737 - HAMAP: MF_00406 - InterPro: IPR013114 - InterPro: IPR010084
Pfam domain/function: PF07977 FabA
EC number: 4.2.1.-
Molecular weight: Translated: 17858; Mature: 17858
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: ACT_SITE 54-54
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSDEYIFNIKDILNILPHRYPFLLIDRILDFKAFQYLKALKNCTVNEPFFQGHFIKEPV CCCCCEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC FPGVLMIEAMSQAAAVLIFKSIGKLNINQLYYFVGIENTRFKKIVVPGDQIFIEVIYLKS CCHHHHHHHHHHHHHHHHHHHCCCCEECEEEEEEEECCCCEEEEEECCCEEEEEEEEEEC KKNFIKFKIFAIVNKKNVCKSTIIFYKKNIFN CCCEEEEEEEEEECCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MNSDEYIFNIKDILNILPHRYPFLLIDRILDFKAFQYLKALKNCTVNEPFFQGHFIKEPV CCCCCEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC FPGVLMIEAMSQAAAVLIFKSIGKLNINQLYYFVGIENTRFKKIVVPGDQIFIEVIYLKS CCHHHHHHHHHHHHHHHHHHHCCCCEECEEEEEEEECCCCEEEEEECCCEEEEEEEEEEC KKNFIKFKIFAIVNKKNVCKSTIIFYKKNIFN CCCEEEEEEEEEECCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12089438