Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
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Accession | NC_011593 |
Length | 2,832,748 |
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The map label for this gene is 213691013
Identifier: 213691013
GI number: 213691013
Start: 110662
End: 111612
Strand: Reverse
Name: 213691013
Synonym: Blon_0091
Alternate gene names: NA
Gene position: 111612-110662 (Counterclockwise)
Preceding gene: 213691014
Following gene: 213691006
Centisome position: 3.94
GC content: 49.11
Gene sequence:
>951_bases ATGGGTATTGACGCCATCGAGGAGTTTCGAAAGAGCCACGGCATTAACACCAAAGGCAACCTAGCCGGCATACTGCAGCT CAACCGCGCCTTCTCGAAAGATACATTGCCAATCAATCCCGATGATTATCTCACGGGTAAAGAAGGACAGGTCAAAGGAC TGAGTGGTGCGAACTGCCAAAGCATTTTAGAGGAGTACCACATCAAGAGGGTGCTCGCGTCCGAAGGTGGTCGAACTAGC CGCGGCCTTATGGGCATAATGAAAGATTATGCAGCGCTCATTAATGAAGAGCGGCCGTCCAGCAAAGATTTCAGCGAGAT AGAGCGTTTTTGGATTGATCGTATACGCAAGTTCTTCAATAGCAAGCCATTCAGGCTAGAGGCCGATGAGTCACTCTCAA TCACCGCAGCAGTAGGCAATCTGTTAGAGCAGGCCAAGAAGCGGCAAAAAGAGAATCCCGGTACCATGTACGAGGGCACG GTGCTGCAGCAGCTCGTGGCAGCAAAGCTGTCTATTATCATGCCGGAAGTGGAAATCAACGGAGCTTCAGTAGCAGATGA CCCCACCGGGCGAGGCGGCGACTTCAATATCGGAGATACCGCCATACACTGCACTACCGCTCCAGCCACGTTGCTTATGG AGAAATGCCAGCGCAATATCAAGAATGGCCTTCATCCAATCATTATCACGGTGAAAGACCGAGTGAAAACTGCTTGGGAT TTGGCAGCGGATATGGGCTTCGCTGAACGATTGGAGGTCTGGGATATTCAGTCATTCCTGTCAACCAATGTCCATGAGCA TGGTCATTTTAGCCAAGATGAACGCAAAACAATGCTCACTGATTTGGTCACCTCTTACAACAAGATATTGACACATACGA GACAGACCCCAGCTTGCGTATTGAGTACAGTAATTAGAAAGATGCTTATACTAGCCGCCAATCTTAATTGA
Upstream 100 bases:
>100_bases GGCGAGCACTACTTCATGCCAGCACTTCGCGGTACATTGGACAAGGCAAAGCAGCAACACGAGCTACGGTCAGCTTGATA GTCGTCGAAGGAGAGCGAGC
Downstream 100 bases:
>100_bases TTATCCGAAAACCGTTCTTAACGTCCGTTACATTAGATTTTGCAAGCAACTTTAAGCACATCGAGGTATCACTGTGAGAG AACGAACATGTGCGCCAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MGIDAIEEFRKSHGINTKGNLAGILQLNRAFSKDTLPINPDDYLTGKEGQVKGLSGANCQSILEEYHIKRVLASEGGRTS RGLMGIMKDYAALINEERPSSKDFSEIERFWIDRIRKFFNSKPFRLEADESLSITAAVGNLLEQAKKRQKENPGTMYEGT VLQQLVAAKLSIIMPEVEINGASVADDPTGRGGDFNIGDTAIHCTTAPATLLMEKCQRNIKNGLHPIIITVKDRVKTAWD LAADMGFAERLEVWDIQSFLSTNVHEHGHFSQDERKTMLTDLVTSYNKILTHTRQTPACVLSTVIRKMLILAANLN
Sequences:
>Translated_316_residues MGIDAIEEFRKSHGINTKGNLAGILQLNRAFSKDTLPINPDDYLTGKEGQVKGLSGANCQSILEEYHIKRVLASEGGRTS RGLMGIMKDYAALINEERPSSKDFSEIERFWIDRIRKFFNSKPFRLEADESLSITAAVGNLLEQAKKRQKENPGTMYEGT VLQQLVAAKLSIIMPEVEINGASVADDPTGRGGDFNIGDTAIHCTTAPATLLMEKCQRNIKNGLHPIIITVKDRVKTAWD LAADMGFAERLEVWDIQSFLSTNVHEHGHFSQDERKTMLTDLVTSYNKILTHTRQTPACVLSTVIRKMLILAANLN >Mature_315_residues GIDAIEEFRKSHGINTKGNLAGILQLNRAFSKDTLPINPDDYLTGKEGQVKGLSGANCQSILEEYHIKRVLASEGGRTSR GLMGIMKDYAALINEERPSSKDFSEIERFWIDRIRKFFNSKPFRLEADESLSITAAVGNLLEQAKKRQKENPGTMYEGTV LQQLVAAKLSIIMPEVEINGASVADDPTGRGGDFNIGDTAIHCTTAPATLLMEKCQRNIKNGLHPIIITVKDRVKTAWDL AADMGFAERLEVWDIQSFLSTNVHEHGHFSQDERKTMLTDLVTSYNKILTHTRQTPACVLSTVIRKMLILAANLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35131; Mature: 34999
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIDAIEEFRKSHGINTKGNLAGILQLNRAFSKDTLPINPDDYLTGKEGQVKGLSGANCQ CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHH SILEEYHIKRVLASEGGRTSRGLMGIMKDYAALINEERPSSKDFSEIERFWIDRIRKFFN HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC SKPFRLEADESLSITAAVGNLLEQAKKRQKENPGTMYEGTVLQQLVAAKLSIIMPEVEIN CCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCEEEC GASVADDPTGRGGDFNIGDTAIHCTTAPATLLMEKCQRNIKNGLHPIIITVKDRVKTAWD CCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHH LAADMGFAERLEVWDIQSFLSTNVHEHGHFSQDERKTMLTDLVTSYNKILTHTRQTPACV HHHHCCHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LSTVIRKMLILAANLN HHHHHHHHHHHHHCCC >Mature Secondary Structure GIDAIEEFRKSHGINTKGNLAGILQLNRAFSKDTLPINPDDYLTGKEGQVKGLSGANCQ CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHH SILEEYHIKRVLASEGGRTSRGLMGIMKDYAALINEERPSSKDFSEIERFWIDRIRKFFN HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC SKPFRLEADESLSITAAVGNLLEQAKKRQKENPGTMYEGTVLQQLVAAKLSIIMPEVEIN CCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCEEEC GASVADDPTGRGGDFNIGDTAIHCTTAPATLLMEKCQRNIKNGLHPIIITVKDRVKTAWD CCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHH LAADMGFAERLEVWDIQSFLSTNVHEHGHFSQDERKTMLTDLVTSYNKILTHTRQTPACV HHHHCCHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LSTVIRKMLILAANLN HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA