Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
---|---|
Accession | NC_011593 |
Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is ptxC [H]
Identifier: 213690947
GI number: 213690947
Start: 22046
End: 22849
Strand: Reverse
Name: ptxC [H]
Synonym: Blon_0021
Alternate gene names: 213690947
Gene position: 22849-22046 (Counterclockwise)
Preceding gene: 213690948
Following gene: 213690946
Centisome position: 0.81
GC content: 64.68
Gene sequence:
>804_bases ATGACCCGCACACCGTCGGCCGGCCGCCCCCTGAAGGACACGGTGCACCGGAACCTGTGGAAACGGCTCGCCACCGTTAT AGTGTTCGTCGTCTGCTTCCTCGCCGCGAAGGACGCGACCGAGACCGACTTCGGCGAGGCGATCGCCAACATGGGGCAGG CCGCGGATTTCTTCTCGAACCTCCTGTCGCCCGACTGGGCGTATTTTGCCAAGGTGTGGATGCCCCTCGTCCAGACGATC CGCATGTCCGTGGTGGGCACGTCGCTGGGACTCCTGTTCGGCGTGCCGTTCGCGTTCCTGTGCACCAGCAACGTGACGGG CAACCGCGTGGTCGCCATGGTCGCCCGCGTGGTCATGGACATCATCCGCACGATCCCCACGCTGCTGCTCGCCGCCCTGG TCGTCGTGTTCATGGGCATCGGACAGGTCAGCGGCATCATCACCATCGCCGTGTTCACCTTCGGCATCGTCGGCCAGCTG ATCTACCAGTCGATCGAGATCTCCGACCCCGGCCCCGTCGAGGCTGCCCGCTCCGTGGGCGCCAACCGCATGCAGATCGC CACATGGTCGATCCTCCCGCAGATCGGGCAGGACATCGCCAGCTACGCCATGTACGCCTTCGAGATCAACATCCGCGCCT CCGTGATCCTCGGATACGTGGGAGCCGGCGGCGTGGGCGTCCTGCTGAACTCCTCACTCAGCCTGATGCGCTACGACCGC GTGTCGCTCGTCATACTCACCGTTCTCGTGCTCGTCGTCATCGTCGACTGGGTCAGCGAGATCATCAGAAAGAGGCTCCG CTGA
Upstream 100 bases:
>100_bases GGGGAACGGTGGTGTTCGACGGCACCCCCGCCCAACTCACCGACGACATGTTCCGCCACATCTACGAGGGCGACGACGCC GGGAAGACGGGGGAGCGATC
Downstream 100 bases:
>100_bases TGCGTATCCGTCTCACCGCACACCACCTCATGGCCACCCTCATAGGCATCGCGGTCATCGTCTGCTTCGCGACCACCAAC TGGTCCGACAAGGCCCCCAT
Product: phosphonate ABC transporter, inner membrane subunit
Products: 3-phospho-serine [Cytoplasm]; phosphite [Cytoplasm]; ADP; phosphate [Cytoplasm]; alkylphosphonate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MTRTPSAGRPLKDTVHRNLWKRLATVIVFVVCFLAAKDATETDFGEAIANMGQAADFFSNLLSPDWAYFAKVWMPLVQTI RMSVVGTSLGLLFGVPFAFLCTSNVTGNRVVAMVARVVMDIIRTIPTLLLAALVVVFMGIGQVSGIITIAVFTFGIVGQL IYQSIEISDPGPVEAARSVGANRMQIATWSILPQIGQDIASYAMYAFEINIRASVILGYVGAGGVGVLLNSSLSLMRYDR VSLVILTVLVLVVIVDWVSEIIRKRLR
Sequences:
>Translated_267_residues MTRTPSAGRPLKDTVHRNLWKRLATVIVFVVCFLAAKDATETDFGEAIANMGQAADFFSNLLSPDWAYFAKVWMPLVQTI RMSVVGTSLGLLFGVPFAFLCTSNVTGNRVVAMVARVVMDIIRTIPTLLLAALVVVFMGIGQVSGIITIAVFTFGIVGQL IYQSIEISDPGPVEAARSVGANRMQIATWSILPQIGQDIASYAMYAFEINIRASVILGYVGAGGVGVLLNSSLSLMRYDR VSLVILTVLVLVVIVDWVSEIIRKRLR >Mature_266_residues TRTPSAGRPLKDTVHRNLWKRLATVIVFVVCFLAAKDATETDFGEAIANMGQAADFFSNLLSPDWAYFAKVWMPLVQTIR MSVVGTSLGLLFGVPFAFLCTSNVTGNRVVAMVARVVMDIIRTIPTLLLAALVVVFMGIGQVSGIITIAVFTFGIVGQLI YQSIEISDPGPVEAARSVGANRMQIATWSILPQIGQDIASYAMYAFEINIRASVILGYVGAGGVGVLLNSSLSLMRYDRV SLVILTVLVLVVIVDWVSEIIRKRLR
Specific function: Probably forms part of a binding-protein-dependent phosphite transporter. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG3639
COG function: function code P; ABC-type phosphate/phosphonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005769 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29002; Mature: 28871
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTPSAGRPLKDTVHRNLWKRLATVIVFVVCFLAAKDATETDFGEAIANMGQAADFFSN CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH LLSPDWAYFAKVWMPLVQTIRMSVVGTSLGLLFGVPFAFLCTSNVTGNRVVAMVARVVMD HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH IIRTIPTLLLAALVVVFMGIGQVSGIITIAVFTFGIVGQLIYQSIEISDPGPVEAARSVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC ANRMQIATWSILPQIGQDIASYAMYAFEINIRASVILGYVGAGGVGVLLNSSLSLMRYDR CCHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHCCCCHHHHHHCCHHHHHHHH VSLVILTVLVLVVIVDWVSEIIRKRLR HHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TRTPSAGRPLKDTVHRNLWKRLATVIVFVVCFLAAKDATETDFGEAIANMGQAADFFSN CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH LLSPDWAYFAKVWMPLVQTIRMSVVGTSLGLLFGVPFAFLCTSNVTGNRVVAMVARVVMD HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH IIRTIPTLLLAALVVVFMGIGQVSGIITIAVFTFGIVGQLIYQSIEISDPGPVEAARSVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC ANRMQIATWSILPQIGQDIASYAMYAFEINIRASVILGYVGAGGVGVLLNSSLSLMRYDR CCHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHCCCCHHHHHHCCHHHHHHHH VSLVILTVLVLVVIVDWVSEIIRKRLR HHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; 3-phospho-serine [Periplasm]; phosphite [Periplasm]; H2O; phosphate [Periplasm]; alkylphosphonate [Periplasm] [C]
Specific reaction: H2O + ATP + 3-phospho-serine [Periplasm] = ADP + phosphate + 3-phospho-serine [Cytoplasm] ATP + phosphite [Periplasm] + H2O = phosphite [Cytoplasm] + ADP + phosphate phosphate [Periplasm] + ATP + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] A
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9791102 [H]