Definition Shewanella piezotolerans WP3 chromosome, complete genome.
Accession NC_011566
Length 5,396,476

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Identifier: 212637283

GI number:

Start: 4802080

End: 4804206

Strand: Direct

Name: Not Available

Synonym: swp_4581

Alternate gene names: NA

Gene position: NA

Preceding gene: 212637282

Following gene: 212637284

Centisome position: NA

GC content: NA

Gene sequence:

>2127_bases
ATGAATTCAATCAGTCAAACTCAACCAGCTGAAGCGGAAAAAATACATCCACTTGAAGTAAGCGAACTAAAAAATATTTT
GGTAGCACTCTTTCAGCAGCTAGGGCTATTTTCACAAGCAAACAATATTCTTAATGATGACTCTGTTAAAACAGTAGATA
CGGTGACGCTCGCCAATTTACTGGGTAAACACCATATCGGTTACTCTGTCTCTAAAGTCGACAAAGAAGCAACCTCGCAA
GCGATTCATCCCTTTATTATTGTCCCAGATACCGAGTCTGCTGTAATGGCGCGACGCAGAAATGAGCAGTATGAAATATT
TGACCTGCATACCGAGCAGTGGCAAGCCATAAGCGCTGCTAAATTACCTCAAATGGGTCACGTTTTCATCATCGAAAACC
TGCCAGCCAGTAAACAGAATATTCGTGCTTTTGCTGCACATATGAGTAAGCGCACTAAATGGTATCGTCCTGTATTTTGG
CTTAGCTTGCTATCGAGTATTACCGGGCTTGCGGTACCGCTATTTACCATGGCTGTTTATGATCGGGTGATCGGTGGGCA
AGCTCCTGACGTACTGCCAACTATCGCCCTTGGCGCTGCGTTAGCTCTAGGGGTGTTGATTACAACTAGACTCACACGTG
CCAATGTTCTAGCCAGCACCAGTAACCGCTTTGCCCGCGACCTTTCTAATCTCACTTTTAAGCGGCTATTGAGTGTGCCA
CTGATGGTGCTATCTCGCGTCGGGATCTCTAACCATATGGCACGTATGCGCAATGCAGAGAAAGTAAGAACCTTGCTCTC
AGGTCCTGGCGGTGCAGGCCTAGTCGACCTACCTTTTACTGCTATTGCGCTTATCACAATTGCACTTTTGAGTGGCTGGT
TAGTCATTGTTCCTCTGGTAATGTTGCTGCTATTTTATTTAGTGATGAAAGCGGTAAACAAATATGCTCAATCAGCCTCT
CCTACCATTAGTGGTGATTATCAAAACTCAATTAACGAGCTCGCAAAGAATCTACTGCAGCTCAAAACCAGCGGTGAAAC
AGACGGTTGGAATACTAAGTTTGCCAGACAGTGTAAAGAAAATTGCAGGCAGAATTTTCTATTCGCCAAACGGAACGGAC
TAAATGCTGCAGTCGCTCATGCGATGAGTCTACTCACGGCGTTAGTCACTGTATTTACGGGTATATTTTTAGTCCTTAAC
CAAAGTATTAGCCCCGGAGCACTGATTGCTTGTGTGATGCTTATCTGGCGTATAACAGGGCCAGCGCAGCTGGCATTTTC
ATCCAGTCAGAAAATCACCATGATGGACATGGCAATCAAACAGTTTGATCGTTTTATGCAAGCGAGTACTGAAAACAGTG
AGTTAAGACTCGATACACCTGCGACACATATCCCGCCTGCCATCAGCTTTCAACATGTTACTTTACGTTATGGCGCTGAG
GTAGAGCCAGCCCTAGCGGGAGTCAGTGTCGACATTGAACCCGGTGAAAATGTCGCAATTATCGGCCCTAATGCCTGCGG
AAAAACCTCTATGCTGCTTGCCGCTATGGGAGTCGCTGAAGCGCAAGCAGGATACGTCAGTGTTAATGGTAAAAACCAAA
AACAGTATGATCCTGAAGCCTATCGAAAGTGGGCTGCATTCTGCCCTGCTGAACCGGATATCTTCCCAGGTTCTTTGGCC
GATAATCTGCGTATTGCCAAAGAAGATGCTACGGACGAAGAGCTAATAGCAGCCATCAAAGCGGCAGGAGGTGAGTCACT
GTTTAATGCCTTAGGTAATGACCTTAACATCGATCTACTTAACCGTGGTCACACCCTATTATCCGCTGTTGAAGGCAGTT
ACATCAGCTTAGCCCGCGCACTGTTGAAACAATCAAGCTTACTTATCCTTGATGAACCCATTGCCAACCGCAATCCCGCA
GCGAAAGCTCAACTACTAAAAACATTCAATGAGCTTAAAGGTAAAAGCACAGTGCTATTTACCAGCCATGATCAAGAGTT
GATCCAACAAGCTGACAAAGTCGTCATTTTAGATAAAGGAGCGGTCGTTTATGCAGGACCAATTCCCGACCAATCAGCTC
AACAACCGCAACCTGTAACACCTCAGGAGAGCCTCCCGAATGGATAA

Upstream 100 bases:

>100_bases
CCTCCCATTTTGCTGAGCTAGCGACTAATAGCGACCTAAGAGTGAATATTGGCGCCTCTGGTGAATGCAACATTATCACT
GCGACTCAGGAGGCTGAAGC

Downstream 100 bases:

>100_bases
GCGTCAACTAGCGAACCGAGTATGGCCTGAGCACGAATTTTCCGATGCAATTGAAGCTCCTGCTGAAAGAAAACTGATTA
AACGCATCATATTTTTAATC

Product: ABC transporter ATP-binding/permease

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>708_residues
MNSISQTQPAEAEKIHPLEVSELKNILVALFQQLGLFSQANNILNDDSVKTVDTVTLANLLGKHHIGYSVSKVDKEATSQ
AIHPFIIVPDTESAVMARRRNEQYEIFDLHTEQWQAISAAKLPQMGHVFIIENLPASKQNIRAFAAHMSKRTKWYRPVFW
LSLLSSITGLAVPLFTMAVYDRVIGGQAPDVLPTIALGAALALGVLITTRLTRANVLASTSNRFARDLSNLTFKRLLSVP
LMVLSRVGISNHMARMRNAEKVRTLLSGPGGAGLVDLPFTAIALITIALLSGWLVIVPLVMLLLFYLVMKAVNKYAQSAS
PTISGDYQNSINELAKNLLQLKTSGETDGWNTKFARQCKENCRQNFLFAKRNGLNAAVAHAMSLLTALVTVFTGIFLVLN
QSISPGALIACVMLIWRITGPAQLAFSSSQKITMMDMAIKQFDRFMQASTENSELRLDTPATHIPPAISFQHVTLRYGAE
VEPALAGVSVDIEPGENVAIIGPNACGKTSMLLAAMGVAEAQAGYVSVNGKNQKQYDPEAYRKWAAFCPAEPDIFPGSLA
DNLRIAKEDATDEELIAAIKAAGGESLFNALGNDLNIDLLNRGHTLLSAVEGSYISLARALLKQSSLLILDEPIANRNPA
AKAQLLKTFNELKGKSTVLFTSHDQELIQQADKVVILDKGAVVYAGPIPDQSAQQPQPVTPQESLPNG

Sequences:
NA

Specific function: NA

COG id: COG2274

COG function: function code V; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA