Definition Shewanella piezotolerans WP3 chromosome, complete genome.
Accession NC_011566
Length 5,396,476

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 212637255

GI number:

Start: 4772472

End: 4774307

Strand: Direct

Name: Not Available

Synonym: swp_4551

Alternate gene names: NA

Gene position: NA

Preceding gene: 212637254

Following gene: 212637262

Centisome position: NA

GC content: NA

Gene sequence:

>1836_bases
ATGTCATCCAGTGAAAAAACTTTCCGCGAACTCGGTCTTGCCGAGCCTTTGTTGCGTGCTCTTGATGAGCTCGGTTACGA
AAAACCAACTCCAATCCAAGCTGCGAGTATCGATCCTCTCATGGCTGGAAAAGATATTTTAGGTCAAGCTCAAACAGGTA
CAGGTAAAACAGGTGCGTTTGCACTGCCTCTACTAAACAGCATTGACCCGAATACAAATTCCCCACAAATTTTAGTACTT
GCACCAACACGTGAACTTGCTGTTCAGGTAGCTGAAGCATTTGGCAGCTACGCAAAATTCATGAAAGGTCTACACGTTCT
ACCTATTTACGGTGGACAAAGCATGCATCAACAACTGAATGCTTTGCGTCGTGGCCCTCAAATAATTGTAGGTACTCCAG
GTCGAGTTATGGACCATATGCGTCGTGGCACTCTTAAATTAGAGTCACTAAAAGCAATGGTACTTGATGAAGCTGATGAG
ATGCTAAAAATGGGCTTCATCGATGATATCGAATGGATCCTTGAGCACACACCTAAGCAACGTCAATTGGCATTATTCTC
AGCGACTATGCCTGAGCAGATTAAGCGTGTTGCTAACAAATATTTATCAGAGCCTGTACACGTTAAAATCGCTGCTACAA
CAACCACTGTAGAGACGATTGAACAACGCTTTGTACAAGTATCACAGCACAACAAGCTAGAAGCATTAGTTCGCGTTCTA
GAAGTAGAGAAGACTGAAGGTATTATTATCTTCGTTCGTACTCGTAACAGTTGTGTTGAGCTAGCTGAAAAGCTAGAAGC
ACGTGGCTACGCTTCATCACCATTACATGGTGACATGAACCAACAAGCCCGTGAACGTGCTGTTGACCAACTTAAGCGTG
GCAAGCTAGACATCATCATCGCGACTGATGTTGCTGCACGTGGTCTGGATGTTGAGCGTATCGGACACGTAGTTAACTAC
GATATTCCATATGATACTGAAGCTTATGTTCACCGTATTGGCCGTACTGGCCGTGCTGGCCGTACTGGTATGGCGATTCT
TTTCGTTACACATAGAGAAATGCGTATGTTGCGCACCATCGAACGTGCAACGAAGAGCCGCATCTCACCAATGGATATTC
CTAGTCCAGAAACAGTGACTGAACGTCGTCTGTCTCGTTTAGGTGAGCAAATTGGTGAAGTAATCGCTAAAGACTCTTTA
GACTTCATGAAAGGCGCAGTTGCAAAACTATGTCAGGAGCTAGAAGTTGATACAGATGTACTTGCTGCAGCTTTACTTCA
ACAAGTTCAGAAAGATCGTCCACTACAATTACCGTCAATGAACGAACGTCAGCGCGACAACCGTGATGACCGTAACTCGC
GTGACCGTAATGATCGCAATTCCCGTGACCGTGGTGACCGTCCTCGTCGTGAATCTCGCCCTACGCCAGCAAACATTGGT
TCAGCAGATTCACTTAAGGATAATCCAGACGTTAAAATGTGCCGTTACATCATCGACGTAGGTCGTGATAATGGTGTTGG
CGTTGGTAATATCGTTGGTGCTGTAGCAAACGAAGCAAACATCGACAGTCGTTACATTGGCCAAATCCAGTTATTTGATC
AAGTCACAGCAATCGATTTGCCTGATGGTATGCCAAAAGACGTATTAGCGCACCTTAAGAAAGTACGCGTATGTGGCCGC
CCATTAAACATTCGCGAAGCAGCGGGTGAGAAGTTCGAGAACACTTCAGGTGGCGATAGCCGTCCTCCACGTCGTCCTCG
CAAACCTTCTGGCGACCGTCGCCCTTCAGGTGACAGAAAGCCGCACCGTAAAGGTCCAGCTAAAGACGCTGAGTAA

Upstream 100 bases:

>100_bases
ACTGATACGTTTTCGGTGCGGGAAGTCGACACGGGGTTGATTTTCTGTCTATAAACATAAGTGCTTTATTGCACTCTGCT
ATTCCACAAGGCTACAACCC

Downstream 100 bases:

>100_bases
TATTAAACGCTAGCTTGTTAAAGCTTAGCGTTTTATAAAATGAAAAAGGAACCTTTCTGGTTCCTTTTTTTGTATCTCAC
TGTCTTAGCGGAGGGATTCG

Product: DEAD box helicase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>611_residues
MSSSEKTFRELGLAEPLLRALDELGYEKPTPIQAASIDPLMAGKDILGQAQTGTGKTGAFALPLLNSIDPNTNSPQILVL
APTRELAVQVAEAFGSYAKFMKGLHVLPIYGGQSMHQQLNALRRGPQIIVGTPGRVMDHMRRGTLKLESLKAMVLDEADE
MLKMGFIDDIEWILEHTPKQRQLALFSATMPEQIKRVANKYLSEPVHVKIAATTTTVETIEQRFVQVSQHNKLEALVRVL
EVEKTEGIIIFVRTRNSCVELAEKLEARGYASSPLHGDMNQQARERAVDQLKRGKLDIIIATDVAARGLDVERIGHVVNY
DIPYDTEAYVHRIGRTGRAGRTGMAILFVTHREMRMLRTIERATKSRISPMDIPSPETVTERRLSRLGEQIGEVIAKDSL
DFMKGAVAKLCQELEVDTDVLAAALLQQVQKDRPLQLPSMNERQRDNRDDRNSRDRNDRNSRDRGDRPRRESRPTPANIG
SADSLKDNPDVKMCRYIIDVGRDNGVGVGNIVGAVANEANIDSRYIGQIQLFDQVTAIDLPDGMPKDVLAHLKKVRVCGR
PLNIREAAGEKFENTSGGDSRPPRRPRKPSGDRRPSGDRKPHRKGPAKDAE

Sequences:
NA

Specific function: NA

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA