| Definition | Shewanella piezotolerans WP3 chromosome, complete genome. |
|---|---|
| Accession | NC_011566 |
| Length | 5,396,476 |
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Identifier: 212637251
GI number:
Start: 4767774
End: 4770614
Strand: Direct
Name: Not Available
Synonym: swp_4547
Alternate gene names: NA
Gene position: NA
Preceding gene: 212637249
Following gene: 212637252
Centisome position: NA
GC content: NA
Gene sequence:
>2841_bases ATGGAAAATATTGAAGTACGTGGCGCTCGTACCCACAATCTTAAAAACATCAACCTAACCATACCTCGCGACAAACTTAT TGTTATTACCGGGCTATCAGGTTCGGGGAAATCATCTTTAGCATTCGATACCTTGTATGCAGAAGGTCAGCGACGTTATG TTGAGTCACTCTCAGCCTATGCTCGTCAGTTTTTAAGTTTGATGGAAAAGCCCGATGTTGATCACATCGAAGGCTTGAGC CCGGCAATATCTATCGAGCAGAAATCAACCTCGCATAACCCACGCTCTACCGTGGGTACTATCACCGAAATATATGATTA TTTAAGACTGCTATTTGCCCGAGTGGGTGAACCACGCTGCCCTACTCATGGCGAGCCATTAGCCGCGCAAACTGTCAGCC AGATGGTCGACAAAGTTTTAGAAATGCCTGAAGGCAGTCGCCAAATGCTGCTTGCTCCCGTGGTTAATGCACGTAAAGGC GAACACGTAAAGCTACTCGAGAGCTTATCGGCGCAAGGTTATATTCGTGCTCGTATTGACGGCGAAGTGTGCGATTTAAC CGATCCACCAGAGCTAGATCTACACGTTAAGCACACCATTGAAGTGGTCGTTGACCGTTTTAAAGTCCGCGATGATATTA AACAGCGCTTAGCGGAATCGTTTGAAACCGCCCTTGAACTATCAGGCGGGATAGCCAAAGTCACTAGCATGGATCCTGTT GAGGGACATGTGAAAGCGGAAGAGCATGTGTTCTCAGCGAATTTCGCCTGCCCTGTTTGTGGCTACTCGATGGCGGAACT TGAACCGCGTATTTTTTCATTCAATAACCCGGCTGGGGCTTGTCAAACCTGTGATGGTTTAGGTGTACAGCAGTATTTCG ATCCCGAGAGAGTGATCACCAATACAGAGCTATCACTCGCTGGCGGCGCGATTAGAGGCTGGGATAGACGTAATTTCTAT TACTTCCAAATGCTCACTTCATTAGCTGAACATTATAAGTTCGATATTGAAAAACCGTTCGAGCAGCTAACCGACGATGT TAGAGAAATTGTGCTTTACGGTTCAGGCAACCAGAGCATCGCCTTCAAATATATCAATGATCGCGGCGATGTCGTGGTTC GAAATCACCCTTTTGAAGGGATTTTGAACAATATGGATAGGCGCTATCGCGAAACAGAATCTAATGCTGTACGTGAAGAG CTCACTAAGTTCATCAATACTCAGTCCTGTAAAAGTTGTGGTGGCTCCCGTCTACGTGAAGAAGCACGTAACGTGTTTAT TGAAGAGTTGAACTTACCAGTATTAACCCAGTGGTCTATTGGCGAAGCCATGGATTACTTTGAAAAGCTTGAACTGACTG GCCAACGTGCACAGATCGCCGAAAAGATCCTCAAAGAGGTACGCGACCGTTTGGGCTTCTTGGTTAATGTTGGTCTTAAT TACCTCAGTTTATCACGCTCTGCCGACACTTTGTCCGGTGGTGAGGCGCAACGTATTCGTCTTGCCAGCCAAATTGGTGC AGGGCTCGTTGGGGTAATGTATGTACTCGATGAACCATCGATAGGCCTACATCAACGTGATAACGAACGTCTTCTACAAA CACTGATCCACCTACGCGATCTCGGCAACACCGTTATTGTGGTTGAGCATGATGAAGATGCTATTCGTATGGCCGATCAT GTCATCGATATCGGTCCAGGAGCCGGCGTGCATGGCGGACAAGTTTTAGGTGAAGGCACACTGAAAGACCTACTTGAGTG TAAAGAGTCTATCACTGGCCAGTATTTATCGGGTGAGAAACAGATCCACATTTCAACCGATCGAACCCAGTATGACCCTA ACAAACTCATCGAGCTTTTTGGTGCAACAGGTAACAATCTCAAAAATGTTGACCTGCAGATCCCTGTAGGGCTGTTTACC TGTATTACCGGTGTATCCGGCTCAGGTAAGTCAACATTAATCAATGACACCTTTTATAAGATTGCTCATATCGAGTTGAA TGGCGCTACCGTCGATGAACCCTCACCGTACAAAAGTATTGTCGGGATGGATCATTGCGATAAAGTGGTCGATATTGATC AAAGCCCCATTGGCCGTACGCCGCGCTCGAATCCAGCGACTTACACAGGGATTTTCACGCCAATTCGCGAACTGTTTGCG GCCACTCAAGAATCTCGTACTCGTGGTTATCAGCCCGGTCGCTTCTCATTTAACGTTAAAGGTGGACGCTGCGAAGCCTG TCAGGGGGACGGCTTGATCAAAGTAGAGATGCATTTCTTGCCCGACGTATACGTGCCATGTGATAGTTGTAAAGGTCAGC GGTACAATCGCGAAACCTTAGATGTTCGCTTTAAAGGCAAGAATATTCACGAAGTGCTGCAGATGACCGTTGAAGAAGCC AGACCTTTCTTTGATGCCATTCCAGCTGTTGCCCGCAAACTGCAAACGCTAATGGATGTTGGTTTGTCCTATATTCGTTT AGGCCAAAGTGCGACCACACTTTCTGGTGGTGAGGCCCAGCGAGTAAAGCTGGCTAAAGAGCTATCTAAACGTGATACCG GCAAAACATTATATATTCTGGATGAACCCACAACCGGCTTGCACTTTGCAGATATTCAACTGTTATTGGATGTATTACAT CGCCTTAAATCCCATGGCAATACCATAGTGGTGATTGAGCATAACTTGGATGTGATAAAAACTGCGGATTGGATTATTGA TCTGGGTCCAGAAGGTGGTTCAGGCGGCGGTACCATTTTAGTAGCTGGTACTCCTGAAGTTGTTGCTGAGAATACCGAAT CACACACTGCACGCTTTTTAAAGCCACTTATAGCAAAGTAA
Upstream 100 bases:
>100_bases CTATATTTCTCCTACAATTGATAGCTTACTTTGTCTATTGCCTAAGGTAAATTTGTGAGATACTTAACCACTTTTTTCGG CTTTGAGATCTGAACGCTAG
Downstream 100 bases:
>100_bases GAGATCATCCAGTTCAATGACAAGTAGTAATATTTTATTAGCCTCAGGCCTAGTGGCAACACTAGGGCTACTTATAATGG TGGTAGTTGACCCATTATTT
Product: excinuclease ABC subunit A
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>946_residues MENIEVRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS PAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARVGEPRCPTHGEPLAAQTVSQMVDKVLEMPEGSRQMLLAPVVNARKG EHVKLLESLSAQGYIRARIDGEVCDLTDPPELDLHVKHTIEVVVDRFKVRDDIKQRLAESFETALELSGGIAKVTSMDPV EGHVKAEEHVFSANFACPVCGYSMAELEPRIFSFNNPAGACQTCDGLGVQQYFDPERVITNTELSLAGGAIRGWDRRNFY YFQMLTSLAEHYKFDIEKPFEQLTDDVREIVLYGSGNQSIAFKYINDRGDVVVRNHPFEGILNNMDRRYRETESNAVREE LTKFINTQSCKSCGGSRLREEARNVFIEELNLPVLTQWSIGEAMDYFEKLELTGQRAQIAEKILKEVRDRLGFLVNVGLN YLSLSRSADTLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLQTLIHLRDLGNTVIVVEHDEDAIRMADH VIDIGPGAGVHGGQVLGEGTLKDLLECKESITGQYLSGEKQIHISTDRTQYDPNKLIELFGATGNNLKNVDLQIPVGLFT CITGVSGSGKSTLINDTFYKIAHIELNGATVDEPSPYKSIVGMDHCDKVVDIDQSPIGRTPRSNPATYTGIFTPIRELFA ATQESRTRGYQPGRFSFNVKGGRCEACQGDGLIKVEMHFLPDVYVPCDSCKGQRYNRETLDVRFKGKNIHEVLQMTVEEA RPFFDAIPAVARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKLAKELSKRDTGKTLYILDEPTTGLHFADIQLLLDVLH RLKSHGNTIVVIEHNLDVIKTADWIIDLGPEGGSGGGTILVAGTPEVVAENTESHTARFLKPLIAK
Sequences:
NA
Specific function: NA
COG id: COG0178
COG function: function code L; Excinuclease ATPase subunit
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA