| Definition | Shewanella piezotolerans WP3 chromosome, complete genome. |
|---|---|
| Accession | NC_011566 |
| Length | 5,396,476 |
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Identifier: 212637106
GI number:
Start: 4607198
End: 4608583
Strand: Reverse
Name: Not Available
Synonym: swp_4399
Alternate gene names: NA
Gene position: NA
Preceding gene: 212637111
Following gene: 212637105
Centisome position: NA
GC content: NA
Gene sequence:
>1386_bases ATGCACGTACATATTTTAGGGATTTGTGGCACCTTCATGGGCGGCCTTGCGCTGCTTGCAAGAGCTGAAGGGCACAAAGT GACAGGTAGTGATGCCAATGTTTACCCGCCGATGAGCACTCAACTAGAAGAGCAAGGGATTGAGCTTATTCAAGGATTTG ACCCATCTCAATTAGGACAAGGTGAAGATGATGCTCCTGATCTTGTCGTGATCGGCAATGCTATGAGCCGCGGTAACCCT TGTGTGGAAACCGTGCTCAACCGTGGTCTTAAGTATACTTCTGGCCCACAGTTTTTAGCGGAGCATATTCTTGCTGAGCG CTGGGTATTGGCGGTTTCCGGTACTCATGGTAAAACCTCAACTGCTAGCATGCTGGCCTGGATTTTAGAAGATTGCGGCT ATGAACCCGGTTTTTTAATTGGCGGTGTGCCGCAGAACTTTGGCGTATCAGCCCGCCTTGGAGGCTCGCCATTTTTTGTG GTGGAAGCCGATGAATATGACAGTGCATTTTTCGATAAACGCTCCAAGTTTGTACATTACCAGCCTCGTACCTTGGTGAT TAATAATCTGGAGTTTGATCATGCAGATATCTTTGATGACTTAAAAGCCATCCAACGCCAATTTAATCACGTAATACGTA CAGTACCGGGAGAGGGTAAAGTCATTTGGCCTGCTGACGCTAAAAGTGTGCAGCAAGTTATTGAACTGGGTTGTTGGAGC GAACAGGAGATGTACCATCTAAACTCCGCAGCTACAGGTTGGTACGCCACTAACCTTAGTGAAGATGGTCATGAGTTTGA AGTGTTCTTAGAGGGTGACTCACAAGGTGTTGTTAATTGGCAATTGATTGGCCAGCACAATATTGAAAATGCAGTAATGG CAATCGCAGCAGCTAGACATGTCGGGGTTAAGCCAGATGCCGCGATTGAAGCATTGGTTAAGTTTGCGCCGCCAAAACGC CGTATGGAGCTGATTGGTTGTGTTGCTGGTGTTGAAGTTTATGATGACTTTGCTCATCACCCTACAGCGATAACCACCTC TTTGGCAGGCATGCGAGCTAAAGTGGGGGCGGGAAAAGTGACGGTTATTTTAGAGCCGCGTTCAAACACCATGAAAAGTG GTGTACATAAAGACACCTTAGCAAATTCATTGGCCTTGGCCAGTAACGCATATCTTTATCAAGCGGGGAATATTGATTGG GATATAAGCGCTGCCATGAGTACAGCTGCAGTGCCTGTTGAAGTCTTATTCGATATTGATGAGATTATTGCCAAAGCCGT GGCTCAAGCTTGCAGCGGAGATACTATCATTGTGATGAGCAATGGAGGTTTTGGTGGCTTGCACCAAAAGTTACTTGCTC AGCTAAGCGATAAAGCTAGCCACTAA
Upstream 100 bases:
>100_bases TGCCAATCTTGTGTTTGAGTGAGTTTAAACCATAGTTAACTGACAAATTGCCCCGCAATTGGTTAGAATAAAGCAGATTT TTAAATTCAGAGTGACCACT
Downstream 100 bases:
>100_bases CATAGCGATTAAAATAGGTAATAGATTAAGCATGAGTGTCACATATCAAAAAGCAGACAAGTCTATCAGTTTAGCTTGGA CTGGCGCCTCTGGTGCACCC
Product: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>461_residues MHVHILGICGTFMGGLALLARAEGHKVTGSDANVYPPMSTQLEEQGIELIQGFDPSQLGQGEDDAPDLVVIGNAMSRGNP CVETVLNRGLKYTSGPQFLAEHILAERWVLAVSGTHGKTSTASMLAWILEDCGYEPGFLIGGVPQNFGVSARLGGSPFFV VEADEYDSAFFDKRSKFVHYQPRTLVINNLEFDHADIFDDLKAIQRQFNHVIRTVPGEGKVIWPADAKSVQQVIELGCWS EQEMYHLNSAATGWYATNLSEDGHEFEVFLEGDSQGVVNWQLIGQHNIENAVMAIAAARHVGVKPDAAIEALVKFAPPKR RMELIGCVAGVEVYDDFAHHPTAITTSLAGMRAKVGAGKVTVILEPRSNTMKSGVHKDTLANSLALASNAYLYQAGNIDW DISAAMSTAAVPVEVLFDIDEIIAKAVAQACSGDTIIVMSNGGFGGLHQKLLAQLSDKASH
Sequences:
NA
Specific function: NA
COG id: COG0773
COG function: function code M; UDP-N-acetylmuramate-alanine ligase
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA