Definition Shewanella piezotolerans WP3 chromosome, complete genome.
Accession NC_011566
Length 5,396,476

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The map label for this gene is Not Available

Identifier: 212637087

GI number:

Start: 4589297

End: 4591849

Strand: Reverse

Name: Not Available

Synonym: swp_4380

Alternate gene names: NA

Gene position: NA

Preceding gene: 212637090

Following gene: 212637086

Centisome position: NA

GC content: NA

Gene sequence:

>2553_bases
ATGTGCGTTATACGCCGCCATAACGAGCCTCACTACAAAACAATGCCAGTAACTTCATTACCCATTCACAGCTTATTAGA
TCCTATTCGCCATGCTTTTAATCAAGCGAATCAAGTGATACTTGAGGCGCCTACCGGAGCCGGAAAGTCGACGGCATTAC
CTTTGGCCATGCTGGACTGGGATGAGATCGACGGTAAAATCCTAATGCTTGAACCGCGCCGAGTCGCTGCTCGAAATGTT
GCCCAGTTTATTGCAAGCCAGCGCGGCTGCCCATTGGGGGCTGAGGTTGGCTATCGAGTTAGAGGCGAATCAAAAGTTAG
TCGCGATACCCGGCTTGAGATTGTGACAGAAGGTGTGCTGACGCGGATGATCCAAAACGATCCTGAATTGACAGGTATTG
CGCTGGTAATATTTGATGAGATCCATGAACGTCATCTAACCACTGATTTAGGTTTAGCTTTAGCGTTAGAGATCCAAGCG
AGTTTTCGCGAGGATTTAAAGTTACTGGCTATGTCAGCCACCTTGTCGGGATTACCGCTAAGCGAGTTGATGCCTGATGC
GCTGACTCTGAGCAGTGAAGGGCGCAGCTTCCCGGTTGAGCAGTGCTATCGCGCCGCACCTGTGCAATCGCTATGGATCG
ATCACATGGCAAAAGTGATCGCAGATGCCTTGAATACCCAGCAACAGGGCTCATTGTTGGCATTCCTACCTGGGCAAGGG
GAGATTAGGCGGCTGCAAAGTTTACTTGCACCGCGTTTAGACCCCAACTTATTTATTATCTGTCCGCTGTATGGCAGCTT
GCCAACTAAAGCACAGGATCAAGCTATTGCGCCGCCGGTAACAGGTATTCGTAAAGTGGTACTCGCCACCAACGTAGCCG
AGTCTAGTTTGACGATTGAGGGAATAACCCAGGTTATTGATTCAGGCTATAAACGCCAAGCAAGCTTTAATCCAAGAACT
GGAGCGACGCGGCTATCACTTAAGCGGATAAGCCAAGCATCCGCGGCTCAACGTAGTGGGCGAGCTGGGCGGCTCATGGC
TGGTTTTAGCACTCGATTGTGGAGCCAAGAGGAGCATGGACGATTGATAAAGGCTGATGAGCCTGAGGTCATGCATACCG
ATCTCATTACGATGGTATTAGATGGTGCGTACTGGGGCGTTAAATCTCTCGACGAGTTACCTATGCTAACTCAGCCGTCA
AAAGCGAATGAAAAGGTTAGCTGGCAGTTACTTCGCTCGCTTGAAATGGTTGATGATAAACGGGTGATTACCGCTCATGG
TCGTGCTGCTTATGAGCTGGGTTGCCAGCCACGTATTGCGCATATGCTGCTTAAAGCGCAGCGTTTATCAAGGCAAGAGA
GTGATAATAATCTAGTGATGCTTGCAGCAATTTTGGCTGGCACTTTAGAGGCTAGAGGTCGCAGTCGTAAAGGCAGTGAT
ATCAGCCATTATTTTCAAGAAGCTTTAACGTCTGAGGCTGGCAAACAGATCCGTCAGTGGCTTAATAGCTTAGGTGTTCG
CAATGGTTCGTCGCACACTCTTTCAATGGTCGCAAGGCAGGCTGCTAGTGATGATATTGCCATGCTGCTGGCTTTTGCTT
ATCCCGATCGCATTGCCAAGCAGCGCGGCGCAAGCGGCTATCAGTTAGCAGGTGGTACGGGCGTCGAGTTAGCGAACGAT
GATAGCTTGTCAGGGCAACCTTGGTTAGTGGTTGCTGACTTTCAAGAGAGTGAAGGCCGCAGCAATGGCAAAGTCTATCT
AGCTGCCACACTCAATGAACAATTATTTACTGATCAATTGTCGAGCTTAGTGGATACTATTGAGTACTGTGGATGGGATA
ACATTAAAGGACGATTTTTCGCCGAGCTACGACGTAACGTCGGTCAGATATCCCTCAGTAAAACCCCAGTTAAACAGTTA
GATAAAAAGCTTATTAAAAATGCGATTGTAGAGCAGGTCGTACTCAATGGCTTAGCATTACTGAAATTTGATGAACGTAC
AGAGCAGTTGCGCTATCGAGTGGCGATTGCCAGCGACCTAGATAAATCGCATGATTGGCCAAGCTTAGATGACGAAAGCT
TAATTGCATTATTGGATGATTGGCTAAAGCCCTATCTTGATGATGTGCGCAGTTTGGCACAATTACAGCAATTAGATTGT
TATACTTTGCTGCTTAATTTAATGCCTTGGGCTACCCAACAGCACTTAGACCGAATATTGCCAATTAAATGGCTCATGGC
CACCGGTACACATGCCAAGATTGAGTATGACGCTCAGAAGCGTGGACGGTTAAGTGTAAGGTTGCAAGAGGCCTTTGGTA
TGCAGCAGAGCCCTCAGTTAGTTAATGGTAAGTTAGTGCTTACTATGGAGCTGCTGTCGCCAGCTAGGCGACCTTTGGCA
TTAACGGCTGATTTAGCGAGTTTTTGGCAAGGTCCATATGACCACGTAAAGAAAGAGATGAAGGGCCGATACCCAAAGCA
TCTATGGCCTGATGACCCGGCAAATACACAGCCCACCAAATTTACTAAAAAGAAGACCTTTAGCTCACAATAG

Upstream 100 bases:

>100_bases
CAGTTAGTCATCAATCGGTACCACAATAAAGATAAACACCTTTGAGAGTTTAGCCTGTTAGCGCTTTTAGAGTACACTGC
TTGGCAAACATTACTTTAGT

Downstream 100 bases:

>100_bases
TGTTGAGCTAGGCAGCGGAACAGTAATGACTGATAAAGCGACACCAAAACCTAAAAAAACCACCAAGCGTCCAGCGGTAA
AAAGAGTATCAGCCGGCAAA

Product: ATP-dependent helicase HrpB

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>850_residues
MCVIRRHNEPHYKTMPVTSLPIHSLLDPIRHAFNQANQVILEAPTGAGKSTALPLAMLDWDEIDGKILMLEPRRVAARNV
AQFIASQRGCPLGAEVGYRVRGESKVSRDTRLEIVTEGVLTRMIQNDPELTGIALVIFDEIHERHLTTDLGLALALEIQA
SFREDLKLLAMSATLSGLPLSELMPDALTLSSEGRSFPVEQCYRAAPVQSLWIDHMAKVIADALNTQQQGSLLAFLPGQG
EIRRLQSLLAPRLDPNLFIICPLYGSLPTKAQDQAIAPPVTGIRKVVLATNVAESSLTIEGITQVIDSGYKRQASFNPRT
GATRLSLKRISQASAAQRSGRAGRLMAGFSTRLWSQEEHGRLIKADEPEVMHTDLITMVLDGAYWGVKSLDELPMLTQPS
KANEKVSWQLLRSLEMVDDKRVITAHGRAAYELGCQPRIAHMLLKAQRLSRQESDNNLVMLAAILAGTLEARGRSRKGSD
ISHYFQEALTSEAGKQIRQWLNSLGVRNGSSHTLSMVARQAASDDIAMLLAFAYPDRIAKQRGASGYQLAGGTGVELAND
DSLSGQPWLVVADFQESEGRSNGKVYLAATLNEQLFTDQLSSLVDTIEYCGWDNIKGRFFAELRRNVGQISLSKTPVKQL
DKKLIKNAIVEQVVLNGLALLKFDERTEQLRYRVAIASDLDKSHDWPSLDDESLIALLDDWLKPYLDDVRSLAQLQQLDC
YTLLLNLMPWATQQHLDRILPIKWLMATGTHAKIEYDAQKRGRLSVRLQEAFGMQQSPQLVNGKLVLTMELLSPARRPLA
LTADLASFWQGPYDHVKKEMKGRYPKHLWPDDPANTQPTKFTKKKTFSSQ

Sequences:
NA

Specific function: NA

COG id: COG1643

COG function: function code L; HrpA-like helicases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA