Definition Shewanella piezotolerans WP3 chromosome, complete genome.
Accession NC_011566
Length 5,396,476

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Identifier: 212636981

GI number:

Start: 4471427

End: 4472638

Strand: Direct

Name: Not Available

Synonym: swp_4267

Alternate gene names: NA

Gene position: NA

Preceding gene: 212636980

Following gene: 212636982

Centisome position: NA

GC content: NA

Gene sequence:

>1212_bases
ATGGATCTCTCAACGTTACGGTCTCAGTTCCCTGCGCTTGCCCAGTCTAACGACGGCTACCCGCTGTGCTATTTAGACAC
CGCCGCCACCAGCCAGAAACCGCAACAAGTGATTGATGCCATGAATCACTACTATCAATTCGATAATGCCAACGTGCATC
GCGCTGCGCACCAATTATCAGCCCGAGCAACCACTCAATATGAAGCGGTACGCGACAAGCTTTGCCAGTTGATTTGTGCT
GAGCGCCGCGAAGAGATAATTTTTACCCACGGTACCACTGAGTCGATAAATATCGTCGCTAATGGCCTTACCTCGCAGCT
CAGGCAAGGCGAGCTGATTTTAATTGATAGTGCAGCCCATCACGCTAATATCGTGCCGTGGCAAGAGCTGGCACAGCGCA
CTGGCGCAATTGTTAAACCCATTCCTTTAACTGGCGATTGCCGTTTAGATATTACCGCTTTCGATGCGCTATTAACCGAG
CGCCCTGCAATTGTCGCGCTAAGTCATGTGTCCAATGTGTTGGGGACCGTGAACCCAGTGGCCGAGCTCGTGGCTAGAGC
CAAGCAAGTGGGGGCAATCACCTTAGTCGATGGTGCACAAGCCATCGCCCACATGGATGTTGATGTACAAGCGATAGGGT
GTGACTTTTACGTATTCTCAGGCCATAAGATGTATGGACCGACGGGGATCGGTGTGCTCTATGGTCGCTTTGATCCACTA
GATAAACTCACCCCGTTAATGACGGGCGGAGAGATGATAAAAACCGTCAGTTTTAGCGGCACTGTATTTAACCAGCTGCC
AAACAGGCTAGAAGCTGGCACGCCACCGATTGCAGAGGTTATCGGTTTAGGCGCTGCAATCGATTTCCTTAATGCTTTGC
CTAAAACGCCAGTGCGTGAAGCAGAGCAAGCTTTATTGGTTTACTTACAAGATTCACTGCAAGACTTAGGTGATATAGCG
CTATACGGCGCTCATAGCGATAATCTTGGTGCCGTCGCCTTTAATCTAGCTGGAGAGCATCATCAAGACGTGGGGATCTT
ACTTGATCAACAAGGGATCGCGGTTCGCTGCGGCCACCACTGCGCCATGCCTCTGATGCAAATATTACAGCTAAATGGTT
GTTGCCGCGCCTCCATTGGCGTTTATACCGATAAAGCCGATATCGACAACTTTATAACCGCAATGAAATCAGTGAAAGAA
CTGCTGTTATAG

Upstream 100 bases:

>100_bases
AGCACAGCTATATCGCTTGCCTTGCCCTTAGTAAATAGGCTTGCATTAAAGGCGCAGATCTTACAAGATCTGCGCGCATT
CTAATCCACAGGTCAAATTA

Downstream 100 bases:

>100_bases
CGACTAGATGCTAGGCAGCTCTAATTTAAAAGCTGACGCTTCTAAAAGTCAGATAACACTCTTTACAACTATATTTATAA
TATCACCATTACATCAATCT

Product: aminotransferase, class V

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>403_residues
MDLSTLRSQFPALAQSNDGYPLCYLDTAATSQKPQQVIDAMNHYYQFDNANVHRAAHQLSARATTQYEAVRDKLCQLICA
ERREEIIFTHGTTESINIVANGLTSQLRQGELILIDSAAHHANIVPWQELAQRTGAIVKPIPLTGDCRLDITAFDALLTE
RPAIVALSHVSNVLGTVNPVAELVARAKQVGAITLVDGAQAIAHMDVDVQAIGCDFYVFSGHKMYGPTGIGVLYGRFDPL
DKLTPLMTGGEMIKTVSFSGTVFNQLPNRLEAGTPPIAEVIGLGAAIDFLNALPKTPVREAEQALLVYLQDSLQDLGDIA
LYGAHSDNLGAVAFNLAGEHHQDVGILLDQQGIAVRCGHHCAMPLMQILQLNGCCRASIGVYTDKADIDNFITAMKSVKE
LLL

Sequences:
NA

Specific function: NA

COG id: COG0520

COG function: function code E; Selenocysteine lyase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA