Definition Shewanella piezotolerans WP3 chromosome, complete genome.
Accession NC_011566
Length 5,396,476

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Identifier: 212634901

GI number:

Start: 2155512

End: 2158307

Strand: Direct

Name: Not Available

Synonym: swp_2084

Alternate gene names: NA

Gene position: NA

Preceding gene: 212634900

Following gene: 212634903

Centisome position: NA

GC content: NA

Gene sequence:

>2796_bases
TTGCTGCCTTACCTTATTACAACTTTGTCACTTTCTATTTTAACTGCCTGTGGTGGCAGCAGTAGTGGCAACAGTGCTCC
AATTTTTTCAGAGTCATCAATGGCTGTTAGTTTAGCGGAAGATAGCACGCAAACTATTTCGACTAGCGCTACAGATGCCG
ATGGAGATCTACTCACTTACTCTGTAGGCAATGCTCCTGCTCGCGGCGCATTGCAGCTTAATCCTCAAACTGGAGTGGCA
AGTTATACACCTAATAGCAACTATTTTGGCAGTGATAGCTTTGAAGTGCTTGTGAGTGATGGCAGTAAAGACAGCAGTTT
AACTGTGTCGCTAACCATCACTGCGGTGAATGATGCACCTGTGTTTAATGGCGATACACTGTTAGTCAGTGGTAATGAAA
TTAAAGCCGGCTCGGTGAGTGCTACTGATGTTGATGAAGATACATTGAGCTATGTCTTAGTGAAGGCACCTGAAAATGGT
CAGTTAAAGCTGGACGCAACCACTGGAGAGGTCAGTTATCAACTCGAACAGCTGATTGAGGTTGATGATGCGGTAATTAT
TAGCGTATCTGATGGCGCTGAAGAGGTGCAAAAGCGTTTTCAAATTACCACTAACTTGGCGACGAATGCCGATAGAGCTT
ATTACTACTATACCTCTGAGTTATCACACTTAAAGCAAGCTGCCGTGATCAGTGAGAACCTCAATGATGATATTAATCAG
TCTGTTATTAATCGCAGTTTAGCGATTGGCTACGCCACTGCTGAGCTAACGACACAAGTGGATGGCCTGCTTAACGCCAG
TAAAATAATTTCAGCTCCCGTTTTTGCCGATGCAAAACTACGAGTCGCCAATGAATATCAGCTGCTTGGAAAAGTTGATG
AGGCGGAAATGTTAAGGCTTGAAGCTAAGTCGATTTATAACCAATATCTCGCATCTAAAGGTGTTAATAGCTTTAACGGT
GACGATGTGATCTTTTATATCGATCTCTCTAAGTCATATAGAGCGGCAGGTGACGAGATCTCGGCAACGGGCATTTTTGA
TATCGTTGATCTGCTGTTCTCATCCGTATTAAGTGAAGAGTATAACCGAGCGGCTTTAGTCGCATTTTTTGGTTATAGCA
GGCAAATTGAAGAGCTTATTAAAATTTGGGAACAAACTAATAGTGATAACGACATAGCGTTTGCTTTGCTTAACCTCGAC
AAGCTCTACGATTACGCTAACCGTATCGGTTATCAAAATGTCTCTAACGACCGTAATGGCAACCTAGGTAAGCCGTTTCA
CAGTGTTCGCCAAGTGGCATTAGTCCAAATAATTGAGTTTTACACTCGCCTTAATGCTAGGGATAAAGCCAAAGCCGCGG
CAGCCGATCTGTTAGCTCTGCATGGAGTTGTTAATTACGATCCGCTATATCCACGAGAGACTAGCCAATACAGCACAGTA
ACTAAGGTTGAGTACCCTGCGGGGGTCGCTTTTAACATCCAACCGATTGTGGTGCTTTATCCTGAAATTGACCCAGCAAT
TTTTATAGAGGGGATCCCAGAAGCCAGCTGGATGCGAGCATATGCAGCATCGGAGGCAGCTGATGCCAAACTGATGGCGC
TTGCGCAAATAGAGCCTGATGGAAACAAAGCGCTAGCATTGGTGCTCGACAGTAGAGATGAAGCCCAACTAAGAAATCAC
TTTACTAACTTAGTTAACTACAATTCAAGTACTCCAGGTTTGGCTATCTATCGTTTGCGTATGGCAGATTATGCTGGTGC
AGTATTAGCGCTAGAAGAGGCGGAAGCCTTGGTTTCCTCTGCAGAATATGTACAGCAAAATCTTTCTAGGCAGGGTTTTG
TTACAGGTAATGTCGGATGCCAAAACCTAATTGAAGTCTATGATGAGCTAGCGCTTGATGACAGTGACAATGCCGCGCAA
TATCAACAAGCTACCGTCCGTGTCGCTAAAATGTGTGTCGCGCTCGCGAAGCAATATTATGCCGATGGCGTTGACGGCAC
TGATGTGAGTATAGAGGATGCAGTTCAAGCAAATTCGCAGCTTATTGAGTTTCTCTATCCGCGTGGGTTAGAGGCTGAAA
TAGAGCAAGTTTTAGCTGTAGCCGAAACCAACCTAGCTAAGTATGACACTGATTCATCGGTAAGAATTGATCTACTGAAG
CAGATCGCGGGCTCCGCTTTTAAAGGTGGCGATTATGCTCGGGCCAACATTTACTATGATCGTACTATTGAGTTGATCAT
TGCGCTTGAAAAGCGCGCTGCTGACAGCTTTTTAAGTGCAATCACTGAGCGCTTCTTAGATCAAAGAGGTAGTGAGAATA
ACTATCCGCTATTTATCGAAAAAATTGACCAAAAAGCAGGATTGCATGCCGACTATGCAGCACTATATAGCCACACAAGA
GCGCAGTTGAAAAAGTTGATCGATGCGAACTTAGCCTTATTAAACACCGCTTCTAATCAAACCCAAATAAATTATGTGCC
CTTCTTTGCGACTCAGTTAGCCGGTGCTGCTTTTTATCAAGAAGCACAAGCATTAATGCAAAACCAGCATTTGGGACCCG
TTGAAAAAGCGGCGATCCAAACCAAGGTTGCTACGGCATTAGCGAATCAAAATCACTTCCCTGTGCAATCGGTGGCAACA
GTTGATACCGATCATGACGGTTTACCTAACTTCTTTAGTGCATCAGCTACTGAAGAGCAGATCCAAGCATCTGGCCTTGT
CTTAGATAGCGACAGTGACAACGATGGCTATAGTGATTTAGATGACAGTAAGCCTCTAGATCCTGCAGTACATTAA

Upstream 100 bases:

>100_bases
TACAGTTTTGTAAACTTTGTTGTTAATGGGAATTGTTCTCATTAACATCTGCGCGTTTTTAACGAATAGAGATAAACAGA
TGTATCACAACAAGAGCTCA

Downstream 100 bases:

>100_bases
GTGATTGAGTAGAAGTAGTAATGACTAAACACTCTCACAAAATTAACACAATCAGCACTATGCTGATTGTGTTTGCGAGC
ACATTATCAACAGCTGTTAG

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>931_residues
MLPYLITTLSLSILTACGGSSSGNSAPIFSESSMAVSLAEDSTQTISTSATDADGDLLTYSVGNAPARGALQLNPQTGVA
SYTPNSNYFGSDSFEVLVSDGSKDSSLTVSLTITAVNDAPVFNGDTLLVSGNEIKAGSVSATDVDEDTLSYVLVKAPENG
QLKLDATTGEVSYQLEQLIEVDDAVIISVSDGAEEVQKRFQITTNLATNADRAYYYYTSELSHLKQAAVISENLNDDINQ
SVINRSLAIGYATAELTTQVDGLLNASKIISAPVFADAKLRVANEYQLLGKVDEAEMLRLEAKSIYNQYLASKGVNSFNG
DDVIFYIDLSKSYRAAGDEISATGIFDIVDLLFSSVLSEEYNRAALVAFFGYSRQIEELIKIWEQTNSDNDIAFALLNLD
KLYDYANRIGYQNVSNDRNGNLGKPFHSVRQVALVQIIEFYTRLNARDKAKAAAADLLALHGVVNYDPLYPRETSQYSTV
TKVEYPAGVAFNIQPIVVLYPEIDPAIFIEGIPEASWMRAYAASEAADAKLMALAQIEPDGNKALALVLDSRDEAQLRNH
FTNLVNYNSSTPGLAIYRLRMADYAGAVLALEEAEALVSSAEYVQQNLSRQGFVTGNVGCQNLIEVYDELALDDSDNAAQ
YQQATVRVAKMCVALAKQYYADGVDGTDVSIEDAVQANSQLIEFLYPRGLEAEIEQVLAVAETNLAKYDTDSSVRIDLLK
QIAGSAFKGGDYARANIYYDRTIELIIALEKRAADSFLSAITERFLDQRGSENNYPLFIEKIDQKAGLHADYAALYSHTR
AQLKKLIDANLALLNTASNQTQINYVPFFATQLAGAAFYQEAQALMQNQHLGPVEKAAIQTKVATALANQNHFPVQSVAT
VDTDHDGLPNFFSASATEEQIQASGLVLDSDSDNDGYSDLDDSKPLDPAVH

Sequences:
NA

Specific function: NA

COG id: COG2931

COG function: function code Q; RTX toxins and related Ca2+-binding proteins

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA