Definition Shewanella piezotolerans WP3 chromosome, complete genome.
Accession NC_011566
Length 5,396,476

Click here to switch to the map view.

The map label for this gene is rplC

Identifier: 212634829

GI number:

Start: 2091654

End: 2092292

Strand: Direct

Name: rplC

Synonym: swp_2011

Alternate gene names: NA

Gene position: NA

Preceding gene: 212634828

Following gene: 212634830

Centisome position: NA

GC content: NA

Gene sequence:

>639_bases
ATGGCTATCGGTCTTATCGGTCGTAAAGTAGGTATGACACGTATCTTCAATGAAGATGGCGCGTCGGTACCTGTAACAGT
AATTGAAATTGCTGCTAACCGTGTAACCCAAGTGAAAACTTTGGATACAGACGGTTACCGTGCACTTCAAGTTACTACTG
GTACCAAAAAAGCTAATCGCATCACTAAACCAGAAGCAGGTCACTTTGCTAAGGCAGGCGTTGAAGCCGGTCGTGGTTTG
TGGGAATTGCGTTTGGCAGATGGTGATGGTGAAGGCATCGAAGTAGGTGCTGAGCTAAATGTAGATATCTTCGCTGACAT
AGCGAAAGTTGATGTAACTGGTCAATCAAAAGGTAAAGGCTTCCAAGGCGGTATTAAGCGTTGGAACTTCCATGCCCAAG
ATATGACACATGGTAACTCTTTGGCACATAGATCTAACGGTTCTATCGGTCAAAACCAGACACCTGGTCGCGTTTTCAAA
GGTAAGAAAATGTCAGGCCACATGGGTGCAGAGCGTGTTACTACGCAGAATCTAGACATTGTACGTGTAGATGCTGAGCG
TAACTTGCTACTGGTTAAGGGTGCAGTTCCAGGCGCTACTAATGGCGACCTGATCATCAAACCAGCTGTTAAAGCTTAA

Upstream 100 bases:

>100_bases
GACTGAAAAGACTGTTGACGCACTTATGCGTCTAGATCTTGCGGCGGGTGTTGACGTTCAGATTAGCTTGGGTTAATTGA
GCTTAGAAGAGGTTTGAGAG

Downstream 100 bases:

>100_bases
GGTCTGAGGAGATAGTAATGGAATTGGTATTGAAAGACGCACAGAGTGCTCTTGAAGTTTCCGAAACTACCTTCGGCCGT
GACTTTAATGAAGCACTGGT

Product: 50S ribosomal protein L3

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>212_residues
MAIGLIGRKVGMTRIFNEDGASVPVTVIEIAANRVTQVKTLDTDGYRALQVTTGTKKANRITKPEAGHFAKAGVEAGRGL
WELRLADGDGEGIEVGAELNVDIFADIAKVDVTGQSKGKGFQGGIKRWNFHAQDMTHGNSLAHRSNGSIGQNQTPGRVFK
GKKMSGHMGAERVTTQNLDIVRVDAERNLLLVKGAVPGATNGDLIIKPAVKA

Sequences:
NA

Specific function: NA

COG id: COG0087

COG function: function code J; Ribosomal protein L3

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA