Definition Shewanella piezotolerans WP3 chromosome, complete genome.
Accession NC_011566
Length 5,396,476

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Identifier: 212634822

GI number:

Start: 2082186

End: 2086400

Strand: Direct

Name: Not Available

Synonym: swp_2004

Alternate gene names: NA

Gene position: NA

Preceding gene: 212634821

Following gene: 212634823

Centisome position: NA

GC content: NA

Gene sequence:

>4215_bases
GTGAAAGACTTATTAAAGTTTCTGAAACAGCAAAGCAAGACTGAAGAATTTGAAGGTATCAAGATCGGCCTAGCGTCGCC
TGACTTGATCCGCTCTTGGTCTTTTGGTGAAGTTAAGAAGCCAGAAACCATTAACTACCGTACATTCAAACCTGAACGTG
AAGGTCTGTTCTGTGCGCGTATTTTTGGTCCAGTAAAAGATTACGAATGTTTATGCGGTAAGTATAAGCGTCTTAAGCAC
CGTGGTGTGATCTGTGAAAAGTGTGGCGTTGAAGTTACACAGACTAAAGTACGTCGTGAGCGTATGGGTCACATTGATCT
TGCAAGCCCAGTAGCACACATCTGGTTCTTGAAGTCACTGCCGTCTCGTATCGGTTTGATGCTAGACATGACTCTACGTG
ATATCGAACGTGTTCTTTACTTCGAATCTTTCGTGGTGATCGAGCCTGGCATGACCAGTCTTGAACGCGGCCAAATGTTG
ACAGAAGAAAACTATCTGGATGCATTGGAAGAGTACGGTGATGAATTCGAAGCTAAGATGGGTGCAGAAGCAGTTCTTGA
ATTGCTACGTGCTATCGAGCTTGAGAAAGAAATTGAAATGATGCGCGAAGAATTGCCATCTATCAATTCTGAGACTCGTC
GTAAGAAGATCACTAAGCGTCTTAAGCTTATTGAGGCATTCTTCCAATCAGGCAACAAGCCTGAGTGGATGATCCTTAAA
GTGCTACCGGTTCTGCCACCTGATCTACGTCCTCTAGTACCACTAGATGGCGGACGTTTTGCTACGTCTGATTTGAACGA
CCTTTACCGTCGTGTGATCAACCGTAACAACCGTCTAAAGCGTCTGTTAGACCTAGCTGCTCCAGATATCATCGTACGTA
ACGAAAAGCGTATGCTGCAAGAATCTGTTGATGCGCTATTGGATAACGGTCGTCGTGGTCGTGCTATTACCGGTTCTAAC
AAGCGTCCGCTTAAATCTTTGGCCGATATGATCAAAGGTAAGCAAGGTCGTTTCCGTCAGAACTTGCTAGGTAAGCGTGT
TGATTACTCTGGTCGTTCGGTTATTACCGTAGGTCCTACGCTTCGCTTACATCAGTGTGGTCTTCCTAAGAAGATGGCAC
TTGAGCTATTTAAACCATTCATCTACGGCAAACTAGAAGGTCGTGGTTTAGCGACAACTATTAAAGCCGCTAAGAAGATG
GTTGAGCGTGAAGTTCCTGAAGTATGGGACGTTCTTGACGATGTTATTCGTGAACACCCAGTGATGCTTAACCGTGCACC
AACACTGCACAGACTAGGTATCCAGGCATTTGAGCCAGTACTAATCGAAGGTAAAGCGATTCAGCTTCATCCATTGGTTT
GTGCGGCATACAACGCCGACTTCGATGGTGACCAAATGGCTGTTCACGTGCCGCTAACGCTGGAAGCTCAGCTAGAAGCA
CGTTCACTAATGATGTCTACCAACAACATCCTTTCACCTGCAAACGGTGAACCGGTGATTACACCTTCTCAGGACGTTGT
ATTGGGTCTTTACTACACTAGCCGCGAATGTGTAAACGGCAAGGGTGAAGGCATGGCATTTGAATCAGTCGCGGAAGCTG
AAAAAGCTTACCGTACTGGTGCTGCCGAATTGCATGCTCGCGTTAAGGTTCGTATTACCGAAACCAAGACTGACGAAGCA
GGCGAAAAAGTTAAGACTCGTCGTATCGTAGATACTACAGTTGGTCGTGCATTATTGTCATTGATCCTGCCAAAAGGCTT
ATCGTTTGATCTGGTTAACCAGAACATGGGTAAGAAGCAGATCTCTAAGCTATTGAACACTTGTTACCGTCAACTAGGTC
TTAAAGATACCGTTATCTTTGCTGACCAATTGATGTACACCGGTTTCCATTTTGCAACTGTGTCAGGTGCCTCTGTTGGT
ATCAACGACATGGTTATTCCAGATGAGAAATACACGCTAGTTGCTGATGCTGAAGCGGAAGTTCTTGAAATTCAAGAGCA
GTTCCAGTCAGGTCTAGTAACAGCTGGTGAGCGTTACAACAAGGTCATCGATATCTGGGCAAGCGCCAACGAAAAAGTGT
CTAAAGCGATGATGGACAACTTGTCTTCAGAAACTGTCATTAACCGTGATGGAGAAGAAGAGAAGCAAGAGTCATTCAAC
AGTATCTACATGATGGCCGATTCGGGCGCTCGTGGTAGTGCGGCACAGATTCGTCAGCTAGCGGGTATGCGTGGTCTGAT
GGCTAAGCCAGATGGCTCAATCATCGAAACGCCAATTACCGCTAACTTCCGTGAAGGTCTAAACGTATCTCAGTACTTTA
TTTCTACTCACGGTGCGCGTAAAGGTCTTGCGGATACGGCATTGAAGACAGCTAACTCTGGTTACCTGACTCGTCGTCTA
GTTGACGTTGCACAAGATTTAGTTGTGATTGAAGAAGACTGTGGCACGTTTGAAGGTCTAACAATGAAACCGCTTATTGA
AGGTGGTGATGTTGTTGAGCCGTTACGTGAACGTGTTCTTGGTCGTGTGGTTGCACAAGACGTATTCAAGCCTGGTACTG
AAGAAGTGCTTATCCCACGTAACACTCTGCTTGATGAAGCATGGTGTGACACGGTAGAAGATAACTCTATCGATGAGATG
ATTGTTCGCTCAGTAATTAGCTGTGACACAGACTTTGGTGTGTGTGCTGCTTGTTATGGTCGTGATTTGGCTCGTGGTCA
TATCATCAACCAAGGTGAAGCGATTGGTGTTGTAGCTGCTCAGTCAATTGGTGAGCCAGGTACACAGCTTACGATGCGTA
CCTTCCACATTGGTGGTGCGGCATCTCGAGCGTCAGCTGAGAACAACGTTCAAGTTAAGAACGCGGGCACTCTTAAGCTA
CACAATGCTAAGCATGTAACCAACAGCGAAGGTAAACTGGTTATCGTATCTCGTTCATCTGAGCTAGCCATCATCGATGA
GTTAGGTCGTGAAAAAGAGCGTTATAAGGTTCCTTACGGTACGGTTCTAGAAAAACTAGAAGACGCACCTGTAGCTGCTG
GTGAGATTATCGCTAACTGGGATCCTCATACTCACCCGATTATCACTGAAGTGGCGGGTAGTACTAAGTTCGTAGATATG
ATTGAAGGTGTCACTATGACACGTCAAACGGACGAACTAACGGGTCTTTCATCTATCGTAGTATTAGATGTTGCACAACG
TCCAACAGCGGGTAAAGAGATGCGTCCTATGATCCGTCTTGTTGCTGCTGATGGCGGTGACTTGATGATTCCTGGTACTG
AAGTACCAGCGCAATACTTCTTGCCTGGCAACGCGATTGTTAACCTTGACGATAACGCTCCAATTAACGTTGGTGATGCA
TTAGCACGTATTCCTCAAGAATCTTCTAAGACTCGCGATATTACCGGTGGTCTGCCACGCGTTGCTGACTTATTCGAAGC
GCGTAAGCCAAAAGAGCCTGCTATTCTTGCTGAAGTATCGGGTACTATCTCGTTCGGTAAGGAAACCAAAGGTAAGCGTC
GTCTAGTGATTACACCTGCTGAAGGTGGTGATCATTACGAAGAGATGATTCCTAAGTGGCGTAACCTTAACGTGTTCGAA
GGTGAAAAAGTTGAACGCGGTGAAGTTATTGCTGATGGTCCAGAAGCAGCGCACGACATTCTACGACTACGTGGTATCCA
CAATGTGGCTAACTACATCGTGAATGAAGTACAGGATGTTTACCGTCTACAGGGCGTGAAGATCAACGATAAGCACATTG
AGGTGATTATTCGCCAGATGCTGCGTAAGTGTGAGATCGCTAACGCTGGTGACAGTGAATTCCTAGCGGGTGAGCAAGCT
GAAGTATCACGTGTGAAGATCGCTAACCGCGAACTTGAAGCACAAGGTAAGCAGCCAGCGACATTCGAGCGTGAACTTCT
TGGTATTACCAAGGCGTCTCTTGCGACTGAATCGTTCATCTCTGCAGCATCGTTCCAGGAGACCACTCGTGTTCTTACTG
AAGCAGCTGTTGGCGGTAAGAGCGATAAGCTACGCGGTCTGAAAGAGAACGTAATTGTGGGTCGTTTGATCCCTGCTGGT
ACAGGTTACTCTTACCACCAGAAGCGTGCTGAAGCGGCTGTTAAACCAGCTGCTGAAGAAGCACCAGCAATTAGCGCGAG
CGAAGCTGAGCAGAACCTTGCTGATCTACTAAATCTTGCTGGAAGTTCTGATTAA

Upstream 100 bases:

>100_bases
TTGGATCAAAAGTAACACTTGGTTACTGCCTCTAATTGGCAAAGAAATTGGTGCTCTGCATTGTGCAGGGCACCCGGTTT
AACTCCTTCAGGAGAGAAAC

Downstream 100 bases:

>100_bases
TTCAGTCTGAAAAGTAAATAGATTGTAAAAAAGGCGCCTTTGGCGCCTTTTTTTTACTTTAAATCGGTTAAAAGTTGTCT
ATTTCTTGACACACACGCCA

Product: DNA-directed RNA polymerase subunit beta'

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1404_residues
MKDLLKFLKQQSKTEEFEGIKIGLASPDLIRSWSFGEVKKPETINYRTFKPEREGLFCARIFGPVKDYECLCGKYKRLKH
RGVICEKCGVEVTQTKVRRERMGHIDLASPVAHIWFLKSLPSRIGLMLDMTLRDIERVLYFESFVVIEPGMTSLERGQML
TEENYLDALEEYGDEFEAKMGAEAVLELLRAIELEKEIEMMREELPSINSETRRKKITKRLKLIEAFFQSGNKPEWMILK
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQESVDALLDNGRRGRAITGSN
KRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPTLRLHQCGLPKKMALELFKPFIYGKLEGRGLATTIKAAKKM
VEREVPEVWDVLDDVIREHPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RSLMMSTNNILSPANGEPVITPSQDVVLGLYYTSRECVNGKGEGMAFESVAEAEKAYRTGAAELHARVKVRITETKTDEA
GEKVKTRRIVDTTVGRALLSLILPKGLSFDLVNQNMGKKQISKLLNTCYRQLGLKDTVIFADQLMYTGFHFATVSGASVG
INDMVIPDEKYTLVADAEAEVLEIQEQFQSGLVTAGERYNKVIDIWASANEKVSKAMMDNLSSETVINRDGEEEKQESFN
SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVSQYFISTHGARKGLADTALKTANSGYLTRRL
VDVAQDLVVIEEDCGTFEGLTMKPLIEGGDVVEPLRERVLGRVVAQDVFKPGTEEVLIPRNTLLDEAWCDTVEDNSIDEM
IVRSVISCDTDFGVCAACYGRDLARGHIINQGEAIGVVAAQSIGEPGTQLTMRTFHIGGAASRASAENNVQVKNAGTLKL
HNAKHVTNSEGKLVIVSRSSELAIIDELGREKERYKVPYGTVLEKLEDAPVAAGEIIANWDPHTHPIITEVAGSTKFVDM
IEGVTMTRQTDELTGLSSIVVLDVAQRPTAGKEMRPMIRLVAADGGDLMIPGTEVPAQYFLPGNAIVNLDDNAPINVGDA
LARIPQESSKTRDITGGLPRVADLFEARKPKEPAILAEVSGTISFGKETKGKRRLVITPAEGGDHYEEMIPKWRNLNVFE
GEKVERGEVIADGPEAAHDILRLRGIHNVANYIVNEVQDVYRLQGVKINDKHIEVIIRQMLRKCEIANAGDSEFLAGEQA
EVSRVKIANRELEAQGKQPATFERELLGITKASLATESFISAASFQETTRVLTEAAVGGKSDKLRGLKENVIVGRLIPAG
TGYSYHQKRAEAAVKPAAEEAPAISASEAEQNLADLLNLAGSSD

Sequences:
NA

Specific function: NA

COG id: COG0086

COG function: function code K; DNA-directed RNA polymerase, beta' subunit/160 kD subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA