Definition | Shewanella piezotolerans WP3 chromosome, complete genome. |
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Accession | NC_011566 |
Length | 5,396,476 |
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Identifier: 212634822
GI number:
Start: 2082186
End: 2086400
Strand: Direct
Name: Not Available
Synonym: swp_2004
Alternate gene names: NA
Gene position: NA
Preceding gene: 212634821
Following gene: 212634823
Centisome position: NA
GC content: NA
Gene sequence:
>4215_bases GTGAAAGACTTATTAAAGTTTCTGAAACAGCAAAGCAAGACTGAAGAATTTGAAGGTATCAAGATCGGCCTAGCGTCGCC TGACTTGATCCGCTCTTGGTCTTTTGGTGAAGTTAAGAAGCCAGAAACCATTAACTACCGTACATTCAAACCTGAACGTG AAGGTCTGTTCTGTGCGCGTATTTTTGGTCCAGTAAAAGATTACGAATGTTTATGCGGTAAGTATAAGCGTCTTAAGCAC CGTGGTGTGATCTGTGAAAAGTGTGGCGTTGAAGTTACACAGACTAAAGTACGTCGTGAGCGTATGGGTCACATTGATCT TGCAAGCCCAGTAGCACACATCTGGTTCTTGAAGTCACTGCCGTCTCGTATCGGTTTGATGCTAGACATGACTCTACGTG ATATCGAACGTGTTCTTTACTTCGAATCTTTCGTGGTGATCGAGCCTGGCATGACCAGTCTTGAACGCGGCCAAATGTTG ACAGAAGAAAACTATCTGGATGCATTGGAAGAGTACGGTGATGAATTCGAAGCTAAGATGGGTGCAGAAGCAGTTCTTGA ATTGCTACGTGCTATCGAGCTTGAGAAAGAAATTGAAATGATGCGCGAAGAATTGCCATCTATCAATTCTGAGACTCGTC GTAAGAAGATCACTAAGCGTCTTAAGCTTATTGAGGCATTCTTCCAATCAGGCAACAAGCCTGAGTGGATGATCCTTAAA GTGCTACCGGTTCTGCCACCTGATCTACGTCCTCTAGTACCACTAGATGGCGGACGTTTTGCTACGTCTGATTTGAACGA CCTTTACCGTCGTGTGATCAACCGTAACAACCGTCTAAAGCGTCTGTTAGACCTAGCTGCTCCAGATATCATCGTACGTA ACGAAAAGCGTATGCTGCAAGAATCTGTTGATGCGCTATTGGATAACGGTCGTCGTGGTCGTGCTATTACCGGTTCTAAC AAGCGTCCGCTTAAATCTTTGGCCGATATGATCAAAGGTAAGCAAGGTCGTTTCCGTCAGAACTTGCTAGGTAAGCGTGT TGATTACTCTGGTCGTTCGGTTATTACCGTAGGTCCTACGCTTCGCTTACATCAGTGTGGTCTTCCTAAGAAGATGGCAC TTGAGCTATTTAAACCATTCATCTACGGCAAACTAGAAGGTCGTGGTTTAGCGACAACTATTAAAGCCGCTAAGAAGATG GTTGAGCGTGAAGTTCCTGAAGTATGGGACGTTCTTGACGATGTTATTCGTGAACACCCAGTGATGCTTAACCGTGCACC AACACTGCACAGACTAGGTATCCAGGCATTTGAGCCAGTACTAATCGAAGGTAAAGCGATTCAGCTTCATCCATTGGTTT GTGCGGCATACAACGCCGACTTCGATGGTGACCAAATGGCTGTTCACGTGCCGCTAACGCTGGAAGCTCAGCTAGAAGCA CGTTCACTAATGATGTCTACCAACAACATCCTTTCACCTGCAAACGGTGAACCGGTGATTACACCTTCTCAGGACGTTGT ATTGGGTCTTTACTACACTAGCCGCGAATGTGTAAACGGCAAGGGTGAAGGCATGGCATTTGAATCAGTCGCGGAAGCTG AAAAAGCTTACCGTACTGGTGCTGCCGAATTGCATGCTCGCGTTAAGGTTCGTATTACCGAAACCAAGACTGACGAAGCA GGCGAAAAAGTTAAGACTCGTCGTATCGTAGATACTACAGTTGGTCGTGCATTATTGTCATTGATCCTGCCAAAAGGCTT ATCGTTTGATCTGGTTAACCAGAACATGGGTAAGAAGCAGATCTCTAAGCTATTGAACACTTGTTACCGTCAACTAGGTC TTAAAGATACCGTTATCTTTGCTGACCAATTGATGTACACCGGTTTCCATTTTGCAACTGTGTCAGGTGCCTCTGTTGGT ATCAACGACATGGTTATTCCAGATGAGAAATACACGCTAGTTGCTGATGCTGAAGCGGAAGTTCTTGAAATTCAAGAGCA GTTCCAGTCAGGTCTAGTAACAGCTGGTGAGCGTTACAACAAGGTCATCGATATCTGGGCAAGCGCCAACGAAAAAGTGT CTAAAGCGATGATGGACAACTTGTCTTCAGAAACTGTCATTAACCGTGATGGAGAAGAAGAGAAGCAAGAGTCATTCAAC AGTATCTACATGATGGCCGATTCGGGCGCTCGTGGTAGTGCGGCACAGATTCGTCAGCTAGCGGGTATGCGTGGTCTGAT GGCTAAGCCAGATGGCTCAATCATCGAAACGCCAATTACCGCTAACTTCCGTGAAGGTCTAAACGTATCTCAGTACTTTA TTTCTACTCACGGTGCGCGTAAAGGTCTTGCGGATACGGCATTGAAGACAGCTAACTCTGGTTACCTGACTCGTCGTCTA GTTGACGTTGCACAAGATTTAGTTGTGATTGAAGAAGACTGTGGCACGTTTGAAGGTCTAACAATGAAACCGCTTATTGA AGGTGGTGATGTTGTTGAGCCGTTACGTGAACGTGTTCTTGGTCGTGTGGTTGCACAAGACGTATTCAAGCCTGGTACTG AAGAAGTGCTTATCCCACGTAACACTCTGCTTGATGAAGCATGGTGTGACACGGTAGAAGATAACTCTATCGATGAGATG ATTGTTCGCTCAGTAATTAGCTGTGACACAGACTTTGGTGTGTGTGCTGCTTGTTATGGTCGTGATTTGGCTCGTGGTCA TATCATCAACCAAGGTGAAGCGATTGGTGTTGTAGCTGCTCAGTCAATTGGTGAGCCAGGTACACAGCTTACGATGCGTA CCTTCCACATTGGTGGTGCGGCATCTCGAGCGTCAGCTGAGAACAACGTTCAAGTTAAGAACGCGGGCACTCTTAAGCTA CACAATGCTAAGCATGTAACCAACAGCGAAGGTAAACTGGTTATCGTATCTCGTTCATCTGAGCTAGCCATCATCGATGA GTTAGGTCGTGAAAAAGAGCGTTATAAGGTTCCTTACGGTACGGTTCTAGAAAAACTAGAAGACGCACCTGTAGCTGCTG GTGAGATTATCGCTAACTGGGATCCTCATACTCACCCGATTATCACTGAAGTGGCGGGTAGTACTAAGTTCGTAGATATG ATTGAAGGTGTCACTATGACACGTCAAACGGACGAACTAACGGGTCTTTCATCTATCGTAGTATTAGATGTTGCACAACG TCCAACAGCGGGTAAAGAGATGCGTCCTATGATCCGTCTTGTTGCTGCTGATGGCGGTGACTTGATGATTCCTGGTACTG AAGTACCAGCGCAATACTTCTTGCCTGGCAACGCGATTGTTAACCTTGACGATAACGCTCCAATTAACGTTGGTGATGCA TTAGCACGTATTCCTCAAGAATCTTCTAAGACTCGCGATATTACCGGTGGTCTGCCACGCGTTGCTGACTTATTCGAAGC GCGTAAGCCAAAAGAGCCTGCTATTCTTGCTGAAGTATCGGGTACTATCTCGTTCGGTAAGGAAACCAAAGGTAAGCGTC GTCTAGTGATTACACCTGCTGAAGGTGGTGATCATTACGAAGAGATGATTCCTAAGTGGCGTAACCTTAACGTGTTCGAA GGTGAAAAAGTTGAACGCGGTGAAGTTATTGCTGATGGTCCAGAAGCAGCGCACGACATTCTACGACTACGTGGTATCCA CAATGTGGCTAACTACATCGTGAATGAAGTACAGGATGTTTACCGTCTACAGGGCGTGAAGATCAACGATAAGCACATTG AGGTGATTATTCGCCAGATGCTGCGTAAGTGTGAGATCGCTAACGCTGGTGACAGTGAATTCCTAGCGGGTGAGCAAGCT GAAGTATCACGTGTGAAGATCGCTAACCGCGAACTTGAAGCACAAGGTAAGCAGCCAGCGACATTCGAGCGTGAACTTCT TGGTATTACCAAGGCGTCTCTTGCGACTGAATCGTTCATCTCTGCAGCATCGTTCCAGGAGACCACTCGTGTTCTTACTG AAGCAGCTGTTGGCGGTAAGAGCGATAAGCTACGCGGTCTGAAAGAGAACGTAATTGTGGGTCGTTTGATCCCTGCTGGT ACAGGTTACTCTTACCACCAGAAGCGTGCTGAAGCGGCTGTTAAACCAGCTGCTGAAGAAGCACCAGCAATTAGCGCGAG CGAAGCTGAGCAGAACCTTGCTGATCTACTAAATCTTGCTGGAAGTTCTGATTAA
Upstream 100 bases:
>100_bases TTGGATCAAAAGTAACACTTGGTTACTGCCTCTAATTGGCAAAGAAATTGGTGCTCTGCATTGTGCAGGGCACCCGGTTT AACTCCTTCAGGAGAGAAAC
Downstream 100 bases:
>100_bases TTCAGTCTGAAAAGTAAATAGATTGTAAAAAAGGCGCCTTTGGCGCCTTTTTTTTACTTTAAATCGGTTAAAAGTTGTCT ATTTCTTGACACACACGCCA
Product: DNA-directed RNA polymerase subunit beta'
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1404_residues MKDLLKFLKQQSKTEEFEGIKIGLASPDLIRSWSFGEVKKPETINYRTFKPEREGLFCARIFGPVKDYECLCGKYKRLKH RGVICEKCGVEVTQTKVRRERMGHIDLASPVAHIWFLKSLPSRIGLMLDMTLRDIERVLYFESFVVIEPGMTSLERGQML TEENYLDALEEYGDEFEAKMGAEAVLELLRAIELEKEIEMMREELPSINSETRRKKITKRLKLIEAFFQSGNKPEWMILK VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQESVDALLDNGRRGRAITGSN KRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPTLRLHQCGLPKKMALELFKPFIYGKLEGRGLATTIKAAKKM VEREVPEVWDVLDDVIREHPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA RSLMMSTNNILSPANGEPVITPSQDVVLGLYYTSRECVNGKGEGMAFESVAEAEKAYRTGAAELHARVKVRITETKTDEA GEKVKTRRIVDTTVGRALLSLILPKGLSFDLVNQNMGKKQISKLLNTCYRQLGLKDTVIFADQLMYTGFHFATVSGASVG INDMVIPDEKYTLVADAEAEVLEIQEQFQSGLVTAGERYNKVIDIWASANEKVSKAMMDNLSSETVINRDGEEEKQESFN SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVSQYFISTHGARKGLADTALKTANSGYLTRRL VDVAQDLVVIEEDCGTFEGLTMKPLIEGGDVVEPLRERVLGRVVAQDVFKPGTEEVLIPRNTLLDEAWCDTVEDNSIDEM IVRSVISCDTDFGVCAACYGRDLARGHIINQGEAIGVVAAQSIGEPGTQLTMRTFHIGGAASRASAENNVQVKNAGTLKL HNAKHVTNSEGKLVIVSRSSELAIIDELGREKERYKVPYGTVLEKLEDAPVAAGEIIANWDPHTHPIITEVAGSTKFVDM IEGVTMTRQTDELTGLSSIVVLDVAQRPTAGKEMRPMIRLVAADGGDLMIPGTEVPAQYFLPGNAIVNLDDNAPINVGDA LARIPQESSKTRDITGGLPRVADLFEARKPKEPAILAEVSGTISFGKETKGKRRLVITPAEGGDHYEEMIPKWRNLNVFE GEKVERGEVIADGPEAAHDILRLRGIHNVANYIVNEVQDVYRLQGVKINDKHIEVIIRQMLRKCEIANAGDSEFLAGEQA EVSRVKIANRELEAQGKQPATFERELLGITKASLATESFISAASFQETTRVLTEAAVGGKSDKLRGLKENVIVGRLIPAG TGYSYHQKRAEAAVKPAAEEAPAISASEAEQNLADLLNLAGSSD
Sequences:
NA
Specific function: NA
COG id: COG0086
COG function: function code K; DNA-directed RNA polymerase, beta' subunit/160 kD subunit
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA