Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21245046
Identifier: 21245046
GI number: 21245046
Start: 5123334
End: 5123894
Strand: Direct
Name: 21245046
Synonym: XAC4334
Alternate gene names: NA
Gene position: 5123334-5123894 (Clockwise)
Preceding gene: 21245044
Following gene: 21245051
Centisome position: 98.99
GC content: 62.39
Gene sequence:
>561_bases GTGAACGGCGGTGCTGGCAGCCCTTGTCGGCAACACGACAGAACCGGTGCTCACGCTCATGCGTGCGCACGCTGCACGAA ACAGTCGCGCGTTCGCGCTCACGCGTGCGTCAGTGGCGTCAGCAATGGCGTGCGGCGCGATCACGCGGTCGAGCAGGCGG CCAGGCTCGCAACGTTACCCACGTCCAGCACAGCGCCATGCCGGCGTGGTGAATTCCTGTGTGCGGCGACGAAGAGACAC CGACAGGCGCGCCGCCGCATCAACTCAAGCCCACGCCGGTGTTGGCGAGCAGCGCACGCGCCATGCCGAGGTCGTCGTGC TCGCGTGCTTCGCTTGGCACAGGCCGACGCTGAACGATATATCGGGCACTGCCATGGCATCCCACAGCGCCTGCGCGATG CGGTGCTCATTGTGACTGTCTCAGAAGCGTTGGCTTTCCTGGGCACGATCGCTTCTCATACAGCCTCAAGCCACAAGCAC GTTTTACCTGTTGCTGCCTCAGAGGCCTTCTTTTCCCTGGCTATCTCTGCGTCTTTTGATACATTTTCCGCATCAGAATA G
Upstream 100 bases:
>100_bases GGCAACGGGTGGGGGATCGCGCAGGTCAACCGTCATGTCTGCGCTGGACAAACCGGCGGTGGATCGGATTCCGGTGGGCT GCATGTAAGGACCTCTGACA
Downstream 100 bases:
>100_bases AGAGCCCTGGATGGGATTGCCCAATGCGGTTGGCGTTGTTGCTCGCAAAGGTGATGCAGCATCCGCAGTGGGTTGCATCT GCTCCGCACCCAGCCGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MNGGAGSPCRQHDRTGAHAHACARCTKQSRVRAHACVSGVSNGVRRDHAVEQAARLATLPTSSTAPCRRGEFLCAATKRH RQARRRINSSPRRCWRAAHAPCRGRRARVLRLAQADAERYIGHCHGIPQRLRDAVLIVTVSEALAFLGTIASHTASSHKH VLPVAASEAFFSLAISASFDTFSASE
Sequences:
>Translated_186_residues MNGGAGSPCRQHDRTGAHAHACARCTKQSRVRAHACVSGVSNGVRRDHAVEQAARLATLPTSSTAPCRRGEFLCAATKRH RQARRRINSSPRRCWRAAHAPCRGRRARVLRLAQADAERYIGHCHGIPQRLRDAVLIVTVSEALAFLGTIASHTASSHKH VLPVAASEAFFSLAISASFDTFSASE >Mature_186_residues MNGGAGSPCRQHDRTGAHAHACARCTKQSRVRAHACVSGVSNGVRRDHAVEQAARLATLPTSSTAPCRRGEFLCAATKRH RQARRRINSSPRRCWRAAHAPCRGRRARVLRLAQADAERYIGHCHGIPQRLRDAVLIVTVSEALAFLGTIASHTASSHKH VLPVAASEAFFSLAISASFDTFSASE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20108; Mature: 20108
Theoretical pI: Translated: 11.80; Mature: 11.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGGAGSPCRQHDRTGAHAHACARCTKQSRVRAHACVSGVSNGVRRDHAVEQAARLATLP CCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TSSTAPCRRGEFLCAATKRHRQARRRINSSPRRCWRAAHAPCRGRRARVLRLAQADAERY CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH IGHCHGIPQRLRDAVLIVTVSEALAFLGTIASHTASSHKHVLPVAASEAFFSLAISASFD HHHHCCHHHHHHHHEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCC TFSASE CCCCCC >Mature Secondary Structure MNGGAGSPCRQHDRTGAHAHACARCTKQSRVRAHACVSGVSNGVRRDHAVEQAARLATLP CCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TSSTAPCRRGEFLCAATKRHRQARRRINSSPRRCWRAAHAPCRGRRARVLRLAQADAERY CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH IGHCHGIPQRLRDAVLIVTVSEALAFLGTIASHTASSHKHVLPVAASEAFFSLAISASFD HHHHCCHHHHHHHHEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCC TFSASE CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA