Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is prnA
Identifier: 21244992
GI number: 21244992
Start: 5049767
End: 5051287
Strand: Direct
Name: prnA
Synonym: XAC4275
Alternate gene names: NA
Gene position: 5049767-5051287 (Clockwise)
Preceding gene: 21244991
Following gene: 21244995
Centisome position: 97.57
GC content: 65.35
Gene sequence:
>1521_bases ATGATTCCCGCTCCACTTCGCAACATCGTCATTGTCGGCGGCGGCACCGCCGGCTGGATGGCGGCCGCCGCGTTCGCGCG CGTGCTTGGGCCCACCTTCAAGGTGCAGCTGATCGAGTCCGAACAGCTGGGCACCGTCGGTGTGGGCGAAGCCACCGTGC CGCACATCAAGGCCTTCAACAACCTGCTCGGCATCGATGAGGCCGAGTTCGTCCGCCAGACCCAGGGCAGCTTCAAGCTC GGCATCGAGTTCGTCGACTGGCAACGCCCCGGCAGTACGTACATGCATGGCTTCGGCACCCAGATCGGGCACCCGCTGGG GCTATTGCCGTTCCACCAATACTGGATCAAGCAACACGCGCGCGGTAAAGCGCAGCCGCTGGGGGCGTACACGCTCAACA CCGTGGCGGCTGCGCGCGGCAAGTTCATGACCTCCGCCGGCGATGTGCCGGCCAACTCGCTGCTGGCCAACATCGCCTAC GCATACCACTTCGATGCCACGCAGTACGCGCACTTTTTGCGGCGGTATTCGCAGCAGCGTGGCGTGACCCGCATCGAAGG GCTGGTCGAGCAGGTGCAGCTGCATCCGGAAAGCGGCCATGTGCAATCGCTGCAGCTGGCCTCCGGGCAGGTGGTGCATG GCGACTTGTTCATCGACTGCTCCGGCTTCGGTGGGCTGCTGATCGAGCAAGCGCTGCACACCGGCTATCACGATTTCACC CATTGGCTGCCGTGCGATCGCGCGCTGGCGGTGCCCTGCGAACAAGTGAGCCCACCGGCGCCGTACACGCGCTCCACCGC GCGCGCAGCCGGCTGGCAGTGGCGCATTCCGCTGCAGCACCGCACCGGCAACGGCTATGTGTATTGCAGCGCGCACATCA GCGACGACGAAGCTGCCGCAACGCTGCTGGCCAACCTGGATGGCAAGCCGCTGGCCGACCCGCGCCCGCTGCGCTTCACC ACCGGGCGGCGCAAGCAGTGCTGGAACCGCAATGTCGTCGCGCTGGGCCTGGCCAGCGGATTTCTGGAGCCGCTGGAATC GACCAGCATCCATCTGATCCAGTCCGGCATTTCCAAGTTGCTGGAGCTGTTTCCGCGCGAGGGCATCAGCCCGGTGCTGG TGCAGCGCTACAACGACCGGCTGGCATTCGAGTTCGACCGCATCCGCGACTTTCTGCTGCTGCACTACCACGCCACCGAA CGCGACGACAGCGCGTTCTGGCGGCATTGCCGCCACATGCCGATCACCCCCGAGTTGCAGGCCACGCTGGACCTGTTCCG CGACAGCGGGCGCTTCTATCGCAACGCCGAAGAGATGTTCGCCGAGATCAGCTGGGTGCAGGTACTGGTGGGCCAGGGCA TCCTGCCGCAGGGGTATCACCCGCTGGTGGACCAGGTGCCCGACCGCGACGCCGAAGGCTTTCTGGCCAGCGTGGCGCAA ACCATTTCGCACTGCGTGGATGTGATGCCGAGCCACCAGCAATTCATCGACCGCTATTGCAAGGCAGCGACGTTGCCGTA A
Upstream 100 bases:
>100_bases GCCTTGCCACATGCGCCGGGACGGGCATGTGGTCTGTCGAACGGGGCCAACTGGCCCCGTTCGTGTGTCCGTCCGCCGTC TTGCTCAGGAATGCATCGAC
Downstream 100 bases:
>100_bases GTGCCTTTTTGCCCTGCGCTTGAGCTGATGCTGAGGGTGGCAGTGACGGATGGCCGATCACGGATGCGGAGATCGAAGCA TGCGCTACCGGCACGCTCCG
Product: tryptophan halogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 506; Mature: 506
Protein sequence:
>506_residues MIPAPLRNIVIVGGGTAGWMAAAAFARVLGPTFKVQLIESEQLGTVGVGEATVPHIKAFNNLLGIDEAEFVRQTQGSFKL GIEFVDWQRPGSTYMHGFGTQIGHPLGLLPFHQYWIKQHARGKAQPLGAYTLNTVAAARGKFMTSAGDVPANSLLANIAY AYHFDATQYAHFLRRYSQQRGVTRIEGLVEQVQLHPESGHVQSLQLASGQVVHGDLFIDCSGFGGLLIEQALHTGYHDFT HWLPCDRALAVPCEQVSPPAPYTRSTARAAGWQWRIPLQHRTGNGYVYCSAHISDDEAAATLLANLDGKPLADPRPLRFT TGRRKQCWNRNVVALGLASGFLEPLESTSIHLIQSGISKLLELFPREGISPVLVQRYNDRLAFEFDRIRDFLLLHYHATE RDDSAFWRHCRHMPITPELQATLDLFRDSGRFYRNAEEMFAEISWVQVLVGQGILPQGYHPLVDQVPDRDAEGFLASVAQ TISHCVDVMPSHQQFIDRYCKAATLP
Sequences:
>Translated_506_residues MIPAPLRNIVIVGGGTAGWMAAAAFARVLGPTFKVQLIESEQLGTVGVGEATVPHIKAFNNLLGIDEAEFVRQTQGSFKL GIEFVDWQRPGSTYMHGFGTQIGHPLGLLPFHQYWIKQHARGKAQPLGAYTLNTVAAARGKFMTSAGDVPANSLLANIAY AYHFDATQYAHFLRRYSQQRGVTRIEGLVEQVQLHPESGHVQSLQLASGQVVHGDLFIDCSGFGGLLIEQALHTGYHDFT HWLPCDRALAVPCEQVSPPAPYTRSTARAAGWQWRIPLQHRTGNGYVYCSAHISDDEAAATLLANLDGKPLADPRPLRFT TGRRKQCWNRNVVALGLASGFLEPLESTSIHLIQSGISKLLELFPREGISPVLVQRYNDRLAFEFDRIRDFLLLHYHATE RDDSAFWRHCRHMPITPELQATLDLFRDSGRFYRNAEEMFAEISWVQVLVGQGILPQGYHPLVDQVPDRDAEGFLASVAQ TISHCVDVMPSHQQFIDRYCKAATLP >Mature_506_residues MIPAPLRNIVIVGGGTAGWMAAAAFARVLGPTFKVQLIESEQLGTVGVGEATVPHIKAFNNLLGIDEAEFVRQTQGSFKL GIEFVDWQRPGSTYMHGFGTQIGHPLGLLPFHQYWIKQHARGKAQPLGAYTLNTVAAARGKFMTSAGDVPANSLLANIAY AYHFDATQYAHFLRRYSQQRGVTRIEGLVEQVQLHPESGHVQSLQLASGQVVHGDLFIDCSGFGGLLIEQALHTGYHDFT HWLPCDRALAVPCEQVSPPAPYTRSTARAAGWQWRIPLQHRTGNGYVYCSAHISDDEAAATLLANLDGKPLADPRPLRFT TGRRKQCWNRNVVALGLASGFLEPLESTSIHLIQSGISKLLELFPREGISPVLVQRYNDRLAFEFDRIRDFLLLHYHATE RDDSAFWRHCRHMPITPELQATLDLFRDSGRFYRNAEEMFAEISWVQVLVGQGILPQGYHPLVDQVPDRDAEGFLASVAQ TISHCVDVMPSHQQFIDRYCKAATLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006905 [H]
Pfam domain/function: PF04820 Trp_halogenase [H]
EC number: NA
Molecular weight: Translated: 56269; Mature: 56269
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPAPLRNIVIVGGGTAGWMAAAAFARVLGPTFKVQLIESEQLGTVGVGEATVPHIKAFN CCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHH NLLGIDEAEFVRQTQGSFKLGIEFVDWQRPGSTYMHGFGTQIGHPLGLLPFHQYWIKQHA HHCCCCHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHCCHHHCCCCCCCHHHHHHHHHHC RGKAQPLGAYTLNTVAAARGKFMTSAGDVPANSLLANIAYAYHFDATQYAHFLRRYSQQR CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHEECCHHHHHHHHHHHHHHC GVTRIEGLVEQVQLHPESGHVQSLQLASGQVVHGDLFIDCSGFGGLLIEQALHTGYHDFT CHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEEEECCCCHHHHHHHHHCCHHHHH HWLPCDRALAVPCEQVSPPAPYTRSTARAAGWQWRIPLQHRTGNGYVYCSAHISDDEAAA HCCCCCCHHCCCHHHCCCCCCCCCCHHHHCCEEEEEEEEEECCCEEEEEEEECCCHHHHH TLLANLDGKPLADPRPLRFTTGRRKQCWNRNVVALGLASGFLEPLESTSIHLIQSGISKL HHHHCCCCCCCCCCCCEEECCCCHHHHCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHH LELFPREGISPVLVQRYNDRLAFEFDRIRDFLLLHYHATERDDSAFWRHCRHMPITPELQ HHHHCCCCCCHHHHHHCCCCCEEEHHHHHHHHEEEEECCCCCCHHHHHHHCCCCCCCHHH ATLDLFRDSGRFYRNAEEMFAEISWVQVLVGQGILPQGYHPLVDQVPDRDAEGFLASVAQ HHHHHHHHCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHH TISHCVDVMPSHQQFIDRYCKAATLP HHHHHHHCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MIPAPLRNIVIVGGGTAGWMAAAAFARVLGPTFKVQLIESEQLGTVGVGEATVPHIKAFN CCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHH NLLGIDEAEFVRQTQGSFKLGIEFVDWQRPGSTYMHGFGTQIGHPLGLLPFHQYWIKQHA HHCCCCHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHCCHHHCCCCCCCHHHHHHHHHHC RGKAQPLGAYTLNTVAAARGKFMTSAGDVPANSLLANIAYAYHFDATQYAHFLRRYSQQR CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHEECCHHHHHHHHHHHHHHC GVTRIEGLVEQVQLHPESGHVQSLQLASGQVVHGDLFIDCSGFGGLLIEQALHTGYHDFT CHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEEEECCCCHHHHHHHHHCCHHHHH HWLPCDRALAVPCEQVSPPAPYTRSTARAAGWQWRIPLQHRTGNGYVYCSAHISDDEAAA HCCCCCCHHCCCHHHCCCCCCCCCCHHHHCCEEEEEEEEEECCCEEEEEEEECCCHHHHH TLLANLDGKPLADPRPLRFTTGRRKQCWNRNVVALGLASGFLEPLESTSIHLIQSGISKL HHHHCCCCCCCCCCCCEEECCCCHHHHCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHH LELFPREGISPVLVQRYNDRLAFEFDRIRDFLLLHYHATERDDSAFWRHCRHMPITPELQ HHHHCCCCCCHHHHHHCCCCCEEEHHHHHHHHEEEEECCCCCCHHHHHHHCCCCCCCHHH ATLDLFRDSGRFYRNAEEMFAEISWVQVLVGQGILPQGYHPLVDQVPDRDAEGFLASVAQ HHHHHHHHCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHH TISHCVDVMPSHQQFIDRYCKAATLP HHHHHHHCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]