Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
---|---|
Accession | NC_003919 |
Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21244982
Identifier: 21244982
GI number: 21244982
Start: 5033847
End: 5034470
Strand: Reverse
Name: 21244982
Synonym: XAC4265
Alternate gene names: NA
Gene position: 5034470-5033847 (Counterclockwise)
Preceding gene: 21244983
Following gene: 21244978
Centisome position: 97.27
GC content: 42.95
Gene sequence:
>624_bases ATGAGCGTTTTAAGCGCACTCACTAATGATCTCGACTGGCGAGAGACTGAGATCGCGTCTATGCGAATCCTTCTCTCGTC GGGATCAGCGACGCCATCGCAGCAAACCGTTCTGCTGAGAGCAGCTTGGGCATTGCTTTACGCTCACTACGAGGGGTTTT GTAAGAACGCATTAGTTATATTTTTTGACGCGGTGTGCAAGTCAGGGGTGTTAGAGGAGAATCTTCCAAGATCTACAAGG TTATTTGCATTGGCTTCTACCCTTAGAAAGCTAAGAGGTCTGCCTGATCACGAAGTTCTGGAAGAGCTAGAAAATTTTGT CTCTTTATATCTCAGAAAAGCACCTGTTTTTCCGGATGTGGACACCAAATCGAATTTATGGCCAAACGTATTAATAGAGT TAATGGAATCTGCAGACCTATGTACCGATAAGGTTATAGAAAATAGATCGAAGCTTCATACTCTTGTGGCTAGGCGAAAT AAAATTGCCCACGGTGAGAATAGCATTATCCCGGAATTATCATATTATAAATCTTACGAGGACGCAGTTTATGAAGTTAT CTACGACCTCGCTTATCAAATTGAAGCTAGATTGCAGGGGGTGCCTTATGTTTCATTCATCTGA
Upstream 100 bases:
>100_bases ATACAGATCAACTATTCCTGGAATCAACTGGCCCTGGCGCTAACACGATTCCAAAACTGGAGCAGAGAATTAGAGTGGTT TCTAAACACTTTCTCGATCA
Downstream 100 bases:
>100_bases GTCTATTGAGATATGTAGCCTTATTCCAAAGTGCGTCTAAGTGAAAATTGGTTGTCGTTCCTGAGTTAATGAGATGACCA ATTTTATAAACGCAGAATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MSVLSALTNDLDWRETEIASMRILLSSGSATPSQQTVLLRAAWALLYAHYEGFCKNALVIFFDAVCKSGVLEENLPRSTR LFALASTLRKLRGLPDHEVLEELENFVSLYLRKAPVFPDVDTKSNLWPNVLIELMESADLCTDKVIENRSKLHTLVARRN KIAHGENSIIPELSYYKSYEDAVYEVIYDLAYQIEARLQGVPYVSFI
Sequences:
>Translated_207_residues MSVLSALTNDLDWRETEIASMRILLSSGSATPSQQTVLLRAAWALLYAHYEGFCKNALVIFFDAVCKSGVLEENLPRSTR LFALASTLRKLRGLPDHEVLEELENFVSLYLRKAPVFPDVDTKSNLWPNVLIELMESADLCTDKVIENRSKLHTLVARRN KIAHGENSIIPELSYYKSYEDAVYEVIYDLAYQIEARLQGVPYVSFI >Mature_206_residues SVLSALTNDLDWRETEIASMRILLSSGSATPSQQTVLLRAAWALLYAHYEGFCKNALVIFFDAVCKSGVLEENLPRSTRL FALASTLRKLRGLPDHEVLEELENFVSLYLRKAPVFPDVDTKSNLWPNVLIELMESADLCTDKVIENRSKLHTLVARRNK IAHGENSIIPELSYYKSYEDAVYEVIYDLAYQIEARLQGVPYVSFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23505; Mature: 23374
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLSALTNDLDWRETEIASMRILLSSGSATPSQQTVLLRAAWALLYAHYEGFCKNALVI CHHHHHHHCCCCCHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FFDAVCKSGVLEENLPRSTRLFALASTLRKLRGLPDHEVLEELENFVSLYLRKAPVFPDV HHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCC DTKSNLWPNVLIELMESADLCTDKVIENRSKLHTLVARRNKIAHGENSIIPELSYYKSYE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH DAVYEVIYDLAYQIEARLQGVPYVSFI HHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SVLSALTNDLDWRETEIASMRILLSSGSATPSQQTVLLRAAWALLYAHYEGFCKNALVI HHHHHHHCCCCCHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FFDAVCKSGVLEENLPRSTRLFALASTLRKLRGLPDHEVLEELENFVSLYLRKAPVFPDV HHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCC DTKSNLWPNVLIELMESADLCTDKVIENRSKLHTLVARRNKIAHGENSIIPELSYYKSYE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH DAVYEVIYDLAYQIEARLQGVPYVSFI HHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA