Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is fldZ [H]
Identifier: 21244872
GI number: 21244872
Start: 4885329
End: 4886000
Strand: Direct
Name: fldZ [H]
Synonym: XAC4155
Alternate gene names: 21244872
Gene position: 4885329-4886000 (Clockwise)
Preceding gene: 21244865
Following gene: 21244873
Centisome position: 94.39
GC content: 67.71
Gene sequence:
>672_bases ATGAGCCAGGTCGTTACCCGGATCGAGCGTATGCCGTTGGCCATCGTCGACGGGCTGGCGCAGGCCGGCGTGGCGACCGT GCACGAAGCGCAGGCCCGCAGCGGCCTGCTGCACCATCGGCTACGTCCCATCTACACCGGCTGCCGCATCGCCGGCACCG CGGTCACCGTGTCGATTCCGCCCGGCGACAACTGGATGATGCATGTAGCCATCGAGCAACTGCATGCAGGCGATGTGCTG GTGGTCGCGCCGACCAGCGACTGTTGCGACGGCTACTTCGGCGACCTGCTGGCCACCTCGGCGCAGGCGCGCGGATGTCG CGGCCTGATCATCGATGCCGGCGTGCGCGATGTGCGCGATCTCACCGCCATGCAGTTCCCTGCCTGGAGCCGCGCCATCT GCGCGCAGGGCACCATCAAGGAGACGCTCGGCTCGGTCAACGTGCCACTGGTGTGCGCCGGGCAACTGATCCAGCCCGGC GATGTGGTGGTGGCCGACGACGATGGCGTCTGCGTGGTGCCGCGTGCCACCGCTGTCGATGTGCTGACCGAAGCGCAGGC GCGCGAGGCACGCGAACTGCTCAAGCGCGAACGTCTGGCACGCGGCGAACTGGGCCTGGACATCTATGCGATGCGCGAAC GTTTGGCCGCCAAAGGCCTGCGTTATGTCTGA
Upstream 100 bases:
>100_bases CTCTAACTATAAGCAAAACCAATATGCATACCTCAAATGAATCTTGAGCCAGCTGGCTCTGCCCGGCCAGACTCGGCGCA TTCTTAACGAGGATGGATGG
Downstream 100 bases:
>100_bases GCGCGTGCGCGCGATGTGGATGCGCGGCGGCACCTCCAAGGGTGGATTCTTTCTGGCCGACGAGTTGCCCGCCGACACCG CCGCGCGCGACGCGTTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: 4-hydroxy-2-oxoglutarate aldolase [H]
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MSQVVTRIERMPLAIVDGLAQAGVATVHEAQARSGLLHHRLRPIYTGCRIAGTAVTVSIPPGDNWMMHVAIEQLHAGDVL VVAPTSDCCDGYFGDLLATSAQARGCRGLIIDAGVRDVRDLTAMQFPAWSRAICAQGTIKETLGSVNVPLVCAGQLIQPG DVVVADDDGVCVVPRATAVDVLTEAQAREARELLKRERLARGELGLDIYAMRERLAAKGLRYV
Sequences:
>Translated_223_residues MSQVVTRIERMPLAIVDGLAQAGVATVHEAQARSGLLHHRLRPIYTGCRIAGTAVTVSIPPGDNWMMHVAIEQLHAGDVL VVAPTSDCCDGYFGDLLATSAQARGCRGLIIDAGVRDVRDLTAMQFPAWSRAICAQGTIKETLGSVNVPLVCAGQLIQPG DVVVADDDGVCVVPRATAVDVLTEAQAREARELLKRERLARGELGLDIYAMRERLAAKGLRYV >Mature_222_residues SQVVTRIERMPLAIVDGLAQAGVATVHEAQARSGLLHHRLRPIYTGCRIAGTAVTVSIPPGDNWMMHVAIEQLHAGDVLV VAPTSDCCDGYFGDLLATSAQARGCRGLIIDAGVRDVRDLTAMQFPAWSRAICAQGTIKETLGSVNVPLVCAGQLIQPGD VVVADDDGVCVVPRATAVDVLTEAQAREARELLKRERLARGELGLDIYAMRERLAAKGLRYV
Specific function: Plays a role in protocatechuate degradation. Has a broad substrate specificity and catalyzes the aldol cleavage of 4- hydroxy-4-methyl-2-oxoglutarate, 4-hydroxy-2-oxoglutarate and 4- carboxy-4-hydroxy-2-oxoadipate, and the decarboxylation of oxaloacetate.
COG id: COG0684
COG function: function code H; Demethylmenaquinone methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014165 - InterPro: IPR005493 [H]
Pfam domain/function: PF03737 Methyltransf_6 [H]
EC number: =4.1.1.3; =4.1.3.16; =4.1.3.17 [H]
Molecular weight: Translated: 23864; Mature: 23733
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQVVTRIERMPLAIVDGLAQAGVATVHEAQARSGLLHHRLRPIYTGCRIAGTAVTVSIP CCHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECEEEEEEEC PGDNWMMHVAIEQLHAGDVLVVAPTSDCCDGYFGDLLATSAQARGCRGLIIDAGVRDVRD CCCCEEEEEEEHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHH LTAMQFPAWSRAICAQGTIKETLGSVNVPLVCAGQLIQPGDVVVADDDGVCVVPRATAVD HHHHCCCCHHHHHHCCCCHHHHHCCCCCCEEECCCEECCCCEEEECCCCEEEECCCHHHH VLTEAQAREARELLKRERLARGELGLDIYAMRERLAAKGLRYV HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure SQVVTRIERMPLAIVDGLAQAGVATVHEAQARSGLLHHRLRPIYTGCRIAGTAVTVSIP CHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECEEEEEEEC PGDNWMMHVAIEQLHAGDVLVVAPTSDCCDGYFGDLLATSAQARGCRGLIIDAGVRDVRD CCCCEEEEEEEHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHH LTAMQFPAWSRAICAQGTIKETLGSVNVPLVCAGQLIQPGDVVVADDDGVCVVPRATAVD HHHHCCCCHHHHHHCCCCHHHHHCCCCCCEEECCCEECCCCEEEECCCCEEEECCCHHHH VLTEAQAREARELLKRERLARGELGLDIYAMRERLAAKGLRYV HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11826967 [H]