Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21244850
Identifier: 21244850
GI number: 21244850
Start: 4856619
End: 4857986
Strand: Direct
Name: 21244850
Synonym: XAC4133
Alternate gene names: NA
Gene position: 4856619-4857986 (Clockwise)
Preceding gene: 77748758
Following gene: 21244851
Centisome position: 93.84
GC content: 67.03
Gene sequence:
>1368_bases ATGCGACGCGCCGGGCCCGACGCGTCGCGTCCATCCGCTGTTCCCCAACCGCACGAGGTCATCATGCTTCAGCATCTTCG TTCTCTGCTCAGCGTCGGAATCGGTGCGACCCTGGCCTGCGCCGGTGTCGCCCACGCCCAATCCAGCGTCGGCGTCCTCG ACGTACTCACCTATAACGTCGCCGGCCTGCCGGAGGGCATCTCCAGTAGCAACCCCGCCACCAATACGCCGCTGCTGGCA CCGAAATTGGCGCCGTATGCGCTGGTTCACGTGCAGGAAGACTTCAACTACCACGCTGCGCTCTACGCCGGCGACAACCA TCCCTACCGCACGCCCACCAGCGGCGGTGCCGCCATCGGCGATGGCCTCAACACGCTGAGCAACTATCCCTTCAACGACT TCACCCGGGTCAAGTGGGACAAGTGCAACGGCACCGATTGCCTCACGCCGAAGGGCTTCAGCTACATGCAGGTGCGGCTG GACAACGGAGTGCTGCTGGACGTCTACAACGCCCACCCCAATGCCGGTACCGAAACCGCCGACCTGGCCGCCCGCCGCGC CAACATCAGCCAGTTGTCGCAATTCATCGGCACCTGGTCGGCCGGTAACGCCGTGCTGGTGATGATGGACTCCAACACCC GCTACACCCGCAGCGAAGACAACATCCGCGAGCTGATCGCCAGCAACGACCTGATCGATCCGTGGGTGGAACTGATCAAG GGCACCGCCCCGGCCGCCGGCGCCGCACCGCTGCTGTGCGGCACGCCGCCGACCAACTCCTGCGAGGTGGTGGACAAGAT CCTGTACCGCGCCGCGCCGCAGCTGACCCTGGCCGCCAACCGCTACCAGCTCGACCCAGGCAACTTCTACGACAGCGCCG GCAAGCCGCTATCGGATCACTATCCGCTGTACACGCAGTTCGGCTGGGCGGTGGGCGCCGATGTGCGCACCAGCGACAGC TTTGGCGGACCGCATGGCGTACCGTTCAACGACGTGGCCGGCGGCGCCCACCAGCGCCAACTGCGCAGCGTCACCCTGCG CGGCGCCGAACGCCTGGATGCGGTGGCCGCCAGCCTGGACAACGGCGCCACCCTGGCCCACGGCGGCAGCGGCGGAACCG CCACCAGCTTGGCCCTGCGCAGCGGCGAGACGCTCACCTCGGCCACCGTCACGCTTGGCCAGTACAACGGCCGCACCCGG TTGTTCTCGCTCAGCCTGACCACCAACCAGGGCCGCAGCATCGCCGCCGGCACCCCGACCAGCGAACGCTATACCCTCAC CGCCCCCACCGGCTGGCATATCGCCGGCTTCACCGGCCGCGCCGGCGATGAAATCGACAAGCTGGGTGTGATCTATCGAA AGGATTGA
Upstream 100 bases:
>100_bases TGCAGCACCGCCACGCCGGCGTACGACTGCCCGCTGCCGCAGTTCGCCCGCATCGTCCAGGCCGCACTCGATCCGCTCGC CTTGGACCACTGAGCCCTCC
Downstream 100 bases:
>100_bases GCGCGGCGGATTTATCCATTGCAACGGAGCGGCGTCGGTTCGGCGCCGCTTTTTGTGTGCGGCAATCACGGCGAGGTTGC GGCCGGCATTCTTGCAGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MRRAGPDASRPSAVPQPHEVIMLQHLRSLLSVGIGATLACAGVAHAQSSVGVLDVLTYNVAGLPEGISSSNPATNTPLLA PKLAPYALVHVQEDFNYHAALYAGDNHPYRTPTSGGAAIGDGLNTLSNYPFNDFTRVKWDKCNGTDCLTPKGFSYMQVRL DNGVLLDVYNAHPNAGTETADLAARRANISQLSQFIGTWSAGNAVLVMMDSNTRYTRSEDNIRELIASNDLIDPWVELIK GTAPAAGAAPLLCGTPPTNSCEVVDKILYRAAPQLTLAANRYQLDPGNFYDSAGKPLSDHYPLYTQFGWAVGADVRTSDS FGGPHGVPFNDVAGGAHQRQLRSVTLRGAERLDAVAASLDNGATLAHGGSGGTATSLALRSGETLTSATVTLGQYNGRTR LFSLSLTTNQGRSIAAGTPTSERYTLTAPTGWHIAGFTGRAGDEIDKLGVIYRKD
Sequences:
>Translated_455_residues MRRAGPDASRPSAVPQPHEVIMLQHLRSLLSVGIGATLACAGVAHAQSSVGVLDVLTYNVAGLPEGISSSNPATNTPLLA PKLAPYALVHVQEDFNYHAALYAGDNHPYRTPTSGGAAIGDGLNTLSNYPFNDFTRVKWDKCNGTDCLTPKGFSYMQVRL DNGVLLDVYNAHPNAGTETADLAARRANISQLSQFIGTWSAGNAVLVMMDSNTRYTRSEDNIRELIASNDLIDPWVELIK GTAPAAGAAPLLCGTPPTNSCEVVDKILYRAAPQLTLAANRYQLDPGNFYDSAGKPLSDHYPLYTQFGWAVGADVRTSDS FGGPHGVPFNDVAGGAHQRQLRSVTLRGAERLDAVAASLDNGATLAHGGSGGTATSLALRSGETLTSATVTLGQYNGRTR LFSLSLTTNQGRSIAAGTPTSERYTLTAPTGWHIAGFTGRAGDEIDKLGVIYRKD >Mature_455_residues MRRAGPDASRPSAVPQPHEVIMLQHLRSLLSVGIGATLACAGVAHAQSSVGVLDVLTYNVAGLPEGISSSNPATNTPLLA PKLAPYALVHVQEDFNYHAALYAGDNHPYRTPTSGGAAIGDGLNTLSNYPFNDFTRVKWDKCNGTDCLTPKGFSYMQVRL DNGVLLDVYNAHPNAGTETADLAARRANISQLSQFIGTWSAGNAVLVMMDSNTRYTRSEDNIRELIASNDLIDPWVELIK GTAPAAGAAPLLCGTPPTNSCEVVDKILYRAAPQLTLAANRYQLDPGNFYDSAGKPLSDHYPLYTQFGWAVGADVRTSDS FGGPHGVPFNDVAGGAHQRQLRSVTLRGAERLDAVAASLDNGATLAHGGSGGTATSLALRSGETLTSATVTLGQYNGRTR LFSLSLTTNQGRSIAAGTPTSERYTLTAPTGWHIAGFTGRAGDEIDKLGVIYRKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005135 [H]
Pfam domain/function: PF03372 Exo_endo_phos [H]
EC number: NA
Molecular weight: Translated: 48127; Mature: 48127
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRAGPDASRPSAVPQPHEVIMLQHLRSLLSVGIGATLACAGVAHAQSSVGVLDVLTYNV CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEHHHHCC AGLPEGISSSNPATNTPLLAPKLAPYALVHVQEDFNYHAALYAGDNHPYRTPTSGGAAIG CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCHHC DGLNTLSNYPFNDFTRVKWDKCNGTDCLTPKGFSYMQVRLDNGVLLDVYNAHPNAGTETA CCHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCHH DLAARRANISQLSQFIGTWSAGNAVLVMMDSNTRYTRSEDNIRELIASNDLIDPWVELIK HHHHHHCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHC GTAPAAGAAPLLCGTPPTNSCEVVDKILYRAAPQLTLAANRYQLDPGNFYDSAGKPLSDH CCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCEEEECCEEECCCCCCCCCCCCCCCCC YPLYTQFGWAVGADVRTSDSFGGPHGVPFNDVAGGAHQRQLRSVTLRGAERLDAVAASLD CCCCEECCEEECCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCHHHHHHHHHHCC NGATLAHGGSGGTATSLALRSGETLTSATVTLGQYNGRTRLFSLSLTTNQGRSIAAGTPT CCCEEEECCCCCCEEEEEEECCCEEEEEEEEEECCCCCEEEEEEEEECCCCCEEECCCCC SERYTLTAPTGWHIAGFTGRAGDEIDKLGVIYRKD CCCEEEECCCCCEEEECCCCCCCCHHHCCEEEECC >Mature Secondary Structure MRRAGPDASRPSAVPQPHEVIMLQHLRSLLSVGIGATLACAGVAHAQSSVGVLDVLTYNV CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEHHHHCC AGLPEGISSSNPATNTPLLAPKLAPYALVHVQEDFNYHAALYAGDNHPYRTPTSGGAAIG CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCHHC DGLNTLSNYPFNDFTRVKWDKCNGTDCLTPKGFSYMQVRLDNGVLLDVYNAHPNAGTETA CCHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCHH DLAARRANISQLSQFIGTWSAGNAVLVMMDSNTRYTRSEDNIRELIASNDLIDPWVELIK HHHHHHCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHC GTAPAAGAAPLLCGTPPTNSCEVVDKILYRAAPQLTLAANRYQLDPGNFYDSAGKPLSDH CCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCEEEECCEEECCCCCCCCCCCCCCCCC YPLYTQFGWAVGADVRTSDSFGGPHGVPFNDVAGGAHQRQLRSVTLRGAERLDAVAASLD CCCCEECCEEECCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCHHHHHHHHHHCC NGATLAHGGSGGTATSLALRSGETLTSATVTLGQYNGRTRLFSLSLTTNQGRSIAAGTPT CCCEEEECCCCCCEEEEEEECCCEEEEEEEEEECCCCCEEEEEEEEECCCCCEEECCCCC SERYTLTAPTGWHIAGFTGRAGDEIDKLGVIYRKD CCCEEEECCCCCEEEECCCCCCCCHHHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]