Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is fecR [C]
Identifier: 21244847
GI number: 21244847
Start: 4850802
End: 4851872
Strand: Direct
Name: fecR [C]
Synonym: XAC4130
Alternate gene names: 21244847
Gene position: 4850802-4851872 (Clockwise)
Preceding gene: 21244846
Following gene: 21244848
Centisome position: 93.73
GC content: 69.56
Gene sequence:
>1071_bases GTGAGCGTCGCGTCGCTGGCGGCGCGCCGCCTGACCGAGGAAGCGGCACACTGGCATGCGCTGCAACGCATGCAGCCGCT GGATGCCGACCAGCAGGCGCGTTTCATGGATTGGCTGACCGCCTCGCCGGCGCATGTGCGCGAATACCTGGCAGTGACGC AGGTGGCCGGTGCGCTCGGCGAGGCGCTGGATGCGATGGCGCTGGATGTCGAGGCGCTGCTGCAGGCCGAGCGCCAACGC GACACCGGGACGGCGCGCAACGTGGTGGCGCTGCCGTTGCCGCCGCGGCGTCCCGTCGCTGCAAGGGGAACCGCGCGATC GCGGTCGGCGGCACGCCGGTCGCACTGGCATGTCGGTCTGGCCGCCATGCTCGGTCTGCTGACCGTGCTCGGCGGCTGGG CCTGGCCGCGCACCACGACCTATGCGACCGCACATGGCGAACAACGCCGCGTGCAACTGGCCGACCGCAGCGTGGTGTTC CTCGATGCAGACACGCGCATCCAGGCCACCATGTCGCCGTGGTCGCGCCACCTGCAGTTGCTGCAGGGCCAGGCGAGCTT CGATGTCGCCCGGGATCGGCGTCCGTTGCAGGTCCGGGTGCTGGACCTGCGCGTGGAAGACATCGGCACCGCGTTCGACA TTGCCCTGCATGGCCAGCAAGCACGCATCGACGTGTCTGCCGGTCGCGTGCATGTCTGGCGCGCCGACCGCCCGGCGCAG CCGATGCTGGCCAACCTGGGTGCAGGACAAAGCGCGCGCATCGATGGCGCCGGCCAGGTCGAGTTGAGCAATGAAGATGT CGCCACCATGCATGCGTGGCAGCAGCAGCGCATCGTCTTCCGCGACGAGCCGTTGCGCAACGTGGCCGAAGACTTCAATC GCCTCAATCGCATCCAGCTGCATATCGACGATGCGCGCGCCGGCGCGATGCGCCTGACCGGCAATCTGCGTAGCGACGAT CTCGCCGGCCTGCGCGCGTTTCTCGCGCGGCAGCCCGGCCTGCGGCTCGAACAGCACGCCGATGCGCTGCACATCGTCAG CCATGCACCACCGGCGACCGCCAACCGGTAA
Upstream 100 bases:
>100_bases CCGAACGTCTGGGTGTGTCCTCGCACATGGTCAAGAAATACGTGGTGCGCGGCCTGTCGGCCTGTCGATCGGCGCTGGCC GACGAGGGAGCGCAGTGGTG
Downstream 100 bases:
>100_bases GGCCCGCGGCCAACGCGACAGACGCGCTTGCGCTCACGTGCGTGCAGAAGTCAGCACTGCAGGCACCACCGCATTGCTCG GCATGTGCCTGCCGTGGGTC
Product: transmembrane sensor
Products: NA
Alternate protein names: Sigma Factor Regulatory Protein FecR/PupR Family; Transmembrane Sensor; FecR Protein; Regulatory Protein; Anti-Feci Sigma Factor Fecr; FecR Family Protein; FecR-Like Transmembrane Sensor; Ferric Citrate Sensor FecR; FecR Iron Siderophore Sensor Protein; Transcriptional Regulator; Transmembrane Sensor Protein; Fe2+-Dicitrate Sensor Membrane Component; Anti-Sigma Factor Protein FecR Family; Anti-Sigma Factor FecR Family; Cytochrome C Oxidase Cbb3-Type Subunit I; CytoChrome C Oxidase Cbb3-Type Subunit I; FecR Iron Transport Regulator Family Protein; Anti-Sigma Factor FecR-Like Protein; Iron Siderophore Sensor Protein; Protein FecR; FecR Family Transmembrane Sensor Protein; IRON Transport Regulator Transmembrane Protein; Sigma Factor Regulatory Protein FecR; Iron Acquisition-Like Protein; Transmembrane FecR Sensor Protein; Transmembrane Sensor Protein FecR Family; IRON Transport-Sensory Transduction Transmembrane Protein; Iron-Dicitrate Sensor Membrane Component; Iron Transport-Sensory Transduction Protein; FecR Iron Sensor Protein; Iron Dicitrate Transmembrane Sensor FecR; Two-Component System Sensor Protein
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MSVASLAARRLTEEAAHWHALQRMQPLDADQQARFMDWLTASPAHVREYLAVTQVAGALGEALDAMALDVEALLQAERQR DTGTARNVVALPLPPRRPVAARGTARSRSAARRSHWHVGLAAMLGLLTVLGGWAWPRTTTYATAHGEQRRVQLADRSVVF LDADTRIQATMSPWSRHLQLLQGQASFDVARDRRPLQVRVLDLRVEDIGTAFDIALHGQQARIDVSAGRVHVWRADRPAQ PMLANLGAGQSARIDGAGQVELSNEDVATMHAWQQQRIVFRDEPLRNVAEDFNRLNRIQLHIDDARAGAMRLTGNLRSDD LAGLRAFLARQPGLRLEQHADALHIVSHAPPATANR
Sequences:
>Translated_356_residues MSVASLAARRLTEEAAHWHALQRMQPLDADQQARFMDWLTASPAHVREYLAVTQVAGALGEALDAMALDVEALLQAERQR DTGTARNVVALPLPPRRPVAARGTARSRSAARRSHWHVGLAAMLGLLTVLGGWAWPRTTTYATAHGEQRRVQLADRSVVF LDADTRIQATMSPWSRHLQLLQGQASFDVARDRRPLQVRVLDLRVEDIGTAFDIALHGQQARIDVSAGRVHVWRADRPAQ PMLANLGAGQSARIDGAGQVELSNEDVATMHAWQQQRIVFRDEPLRNVAEDFNRLNRIQLHIDDARAGAMRLTGNLRSDD LAGLRAFLARQPGLRLEQHADALHIVSHAPPATANR >Mature_355_residues SVASLAARRLTEEAAHWHALQRMQPLDADQQARFMDWLTASPAHVREYLAVTQVAGALGEALDAMALDVEALLQAERQRD TGTARNVVALPLPPRRPVAARGTARSRSAARRSHWHVGLAAMLGLLTVLGGWAWPRTTTYATAHGEQRRVQLADRSVVFL DADTRIQATMSPWSRHLQLLQGQASFDVARDRRPLQVRVLDLRVEDIGTAFDIALHGQQARIDVSAGRVHVWRADRPAQP MLANLGAGQSARIDGAGQVELSNEDVATMHAWQQQRIVFRDEPLRNVAEDFNRLNRIQLHIDDARAGAMRLTGNLRSDDL AGLRAFLARQPGLRLEQHADALHIVSHAPPATANR
Specific function: Regulation Of Iron Dicitrate Transport. In The Absence Of Citrate Fecr Inactivates Feci. Fecr Is Probably A Sensor That Recognizes Iron Dicitrate In The Periplasm. [C]
COG id: COG3712
COG function: function code PT; Fe2+-dicitrate sensor, membrane component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39363; Mature: 39232
Theoretical pI: Translated: 11.22; Mature: 11.22
Prosite motif: PS00449 ATPASE_A
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVASLAARRLTEEAAHWHALQRMQPLDADQQARFMDWLTASPAHVREYLAVTQVAGALG CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH EALDAMALDVEALLQAERQRDTGTARNVVALPLPPRRPVAARGTARSRSAARRSHWHVGL HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH AAMLGLLTVLGGWAWPRTTTYATAHGEQRRVQLADRSVVFLDADTRIQATMSPWSRHLQL HHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEECCEEEEEECCCEEEEEHHHHHHHHHH LQGQASFDVARDRRPLQVRVLDLRVEDIGTAFDIALHGQQARIDVSAGRVHVWRADRPAQ HCCCCCHHHHCCCCCEEEEEEEEEEHHCCCEEEEEECCCEEEEEECCCEEEEEECCCCCC PMLANLGAGQSARIDGAGQVELSNEDVATMHAWQQQRIVFRDEPLRNVAEDFNRLNRIQL CHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCEEECCCHHHHHHHHHHHCCEEEE HIDDARAGAMRLTGNLRSDDLAGLRAFLARQPGLRLEQHADALHIVSHAPPATANR EEECCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHCCCEEEEECCCCCCCCC >Mature Secondary Structure SVASLAARRLTEEAAHWHALQRMQPLDADQQARFMDWLTASPAHVREYLAVTQVAGALG CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH EALDAMALDVEALLQAERQRDTGTARNVVALPLPPRRPVAARGTARSRSAARRSHWHVGL HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH AAMLGLLTVLGGWAWPRTTTYATAHGEQRRVQLADRSVVFLDADTRIQATMSPWSRHLQL HHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEECCEEEEEECCCEEEEEHHHHHHHHHH LQGQASFDVARDRRPLQVRVLDLRVEDIGTAFDIALHGQQARIDVSAGRVHVWRADRPAQ HCCCCCHHHHCCCCCEEEEEEEEEEHHCCCEEEEEECCCEEEEEECCCEEEEEECCCCCC PMLANLGAGQSARIDGAGQVELSNEDVATMHAWQQQRIVFRDEPLRNVAEDFNRLNRIQL CHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCEEECCCHHHHHHHHHHHCCEEEE HIDDARAGAMRLTGNLRSDDLAGLRAFLARQPGLRLEQHADALHIVSHAPPATANR EEECCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA