Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is sapC
Identifier: 21244766
GI number: 21244766
Start: 4744032
End: 4744721
Strand: Direct
Name: sapC
Synonym: XAC4049
Alternate gene names: NA
Gene position: 4744032-4744721 (Clockwise)
Preceding gene: 21244765
Following gene: 21244767
Centisome position: 91.66
GC content: 63.19
Gene sequence:
>690_bases GTGTTGTTGAACAATCTCGATCACCGCGATCTGCGCGTGATCACCGCGCACGGCGCCGCCTATGGCGATGACGTGATGTC GGCTGCGACTTTTCCGCAGGAGTTCCGCCAGTTGCAGGCGCAATACCCCATCGTGTTCCATCGCAGCGGCGAGCGCAGTT TCCAGCCGCTGGCATTGCTGGGATTACGCCTGGGCGAAAACCTGTTCCTGGATGGGGCGCGTTGGGATGCGCCCTATATC CCGCTGGCGATCCAGCGCCAACCGTTCCTGATCGGCGAACAGCCCGATGGGCCGATGGTGCATGTGGACCTGGACAGCCC ACGCGTCAGCACCACCGAGGGCCAGTTGCTGTTTCGCGAACACGGCGGCACCACCGAATTTCTCGACCACATCAGCCAGG TGCTGCGCACGCTGCACGATGGCCTGGTGGCCAGCACGGCATTCGTCGAACGTGCGCTGCGTTACGACCTGCTCGAACCA TTCGTGTTCGAAGCCACCTTGAACAACGGCCTGGAATGCCGCCTGGCCGGGCTCTATGTCGTGCACGAAGAACGCCTGCG CGCACTCGACGACGCGGCGCTGCTCGAACTGCACCGGCATGGCGATCTGGAACCGCTGTACATGGCGGTGGCCTCGATTG CGCAATTGCGCCATCTGCTCGAACGCATGAACCGCCGTCATGCCGGCTGA
Upstream 100 bases:
>100_bases AAGGACGTGAACGCATCCGGGGCTTGCCGTGCAGTGGCGATTCGTTGAAGCATGGGCCACGCGCCCCCGCGTGCCGTGCC TATCCCCCATGACCAATGCT
Downstream 100 bases:
>100_bases GCCACGCGCCATCCAAGAGCGTCACGGCCTGGACCCGCAACAGCTGGACCCGGCCATCCTTCGCTCCACCACGCCGCTGG TGCTGCGGGGGCTGGTGCGC
Product: SapC protein
Products: NA
Alternate protein names: SapC Related Protein; SapC Superfamily Protein; SapC-Related Protein; Sapc Family Protein; SapC-Like Protein
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MLLNNLDHRDLRVITAHGAAYGDDVMSAATFPQEFRQLQAQYPIVFHRSGERSFQPLALLGLRLGENLFLDGARWDAPYI PLAIQRQPFLIGEQPDGPMVHVDLDSPRVSTTEGQLLFREHGGTTEFLDHISQVLRTLHDGLVASTAFVERALRYDLLEP FVFEATLNNGLECRLAGLYVVHEERLRALDDAALLELHRHGDLEPLYMAVASIAQLRHLLERMNRRHAG
Sequences:
>Translated_229_residues MLLNNLDHRDLRVITAHGAAYGDDVMSAATFPQEFRQLQAQYPIVFHRSGERSFQPLALLGLRLGENLFLDGARWDAPYI PLAIQRQPFLIGEQPDGPMVHVDLDSPRVSTTEGQLLFREHGGTTEFLDHISQVLRTLHDGLVASTAFVERALRYDLLEP FVFEATLNNGLECRLAGLYVVHEERLRALDDAALLELHRHGDLEPLYMAVASIAQLRHLLERMNRRHAG >Mature_229_residues MLLNNLDHRDLRVITAHGAAYGDDVMSAATFPQEFRQLQAQYPIVFHRSGERSFQPLALLGLRLGENLFLDGARWDAPYI PLAIQRQPFLIGEQPDGPMVHVDLDSPRVSTTEGQLLFREHGGTTEFLDHISQVLRTLHDGLVASTAFVERALRYDLLEP FVFEATLNNGLECRLAGLYVVHEERLRALDDAALLELHRHGDLEPLYMAVASIAQLRHLLERMNRRHAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25906; Mature: 25906
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLNNLDHRDLRVITAHGAAYGDDVMSAATFPQEFRQLQAQYPIVFHRSGERSFQPLALL CCCCCCCCCCEEEEEECCCCCCHHHHHHHCCHHHHHHHHHCCCEEEECCCCCCCCHHHHH GLRLGENLFLDGARWDAPYIPLAIQRQPFLIGEQPDGPMVHVDLDSPRVSTTEGQLLFRE HHHHCCCEEECCCCCCCCCCCEEECCCCEEECCCCCCCEEEEECCCCCCCCCCCCEEEEE HGGTTEFLDHISQVLRTLHDGLVASTAFVERALRYDLLEPFVFEATLNNGLECRLAGLYV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEE VHEERLRALDDAALLELHRHGDLEPLYMAVASIAQLRHLLERMNRRHAG EEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLLNNLDHRDLRVITAHGAAYGDDVMSAATFPQEFRQLQAQYPIVFHRSGERSFQPLALL CCCCCCCCCCEEEEEECCCCCCHHHHHHHCCHHHHHHHHHCCCEEEECCCCCCCCHHHHH GLRLGENLFLDGARWDAPYIPLAIQRQPFLIGEQPDGPMVHVDLDSPRVSTTEGQLLFRE HHHHCCCEEECCCCCCCCCCCEEECCCCEEECCCCCCCEEEEECCCCCCCCCCCCEEEEE HGGTTEFLDHISQVLRTLHDGLVASTAFVERALRYDLLEPFVFEATLNNGLECRLAGLYV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEE VHEERLRALDDAALLELHRHGDLEPLYMAVASIAQLRHLLERMNRRHAG EEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA