Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21244700
Identifier: 21244700
GI number: 21244700
Start: 4675328
End: 4675813
Strand: Direct
Name: 21244700
Synonym: XAC3982
Alternate gene names: NA
Gene position: 4675328-4675813 (Clockwise)
Preceding gene: 21244699
Following gene: 21244701
Centisome position: 90.33
GC content: 65.43
Gene sequence:
>486_bases GTGAGCGATCAGGCCTCTCCCGCTGCCGGAACCGACGCGCCAGACGCGCGCGCGCAAACGCCAGGACTGGACGAAAGCGT ACGTGCGGTCGGCGCCGCCGGCCGTGCCACGCTGGGCTCGGCCAAGGACACCAGTCGCGCCTTGCGCCGGCTGGTGTCGG CTGATCTGCAACTGGCACGCAGCGCATTCGGGCGAGGCCTGGCCTGGGCCTGCGTGGCCGTGGTGTTCGGTGCCTCGTCA TGGTTATTGCTGGCTGGCGCCATCATCGCCCTGCTGCAGCGTGCCGGGCTGTCGTGGTTCCAGGCGATGTTTTTCACTGC GTTGGCGAGTCTGTTGGTGACCGGCATTGCGGCATGGCGTGTGTTCTTCTACTTCGACCATACCGGCATGAATGCAACGC GCCGTCAGCTCATCAAGCTTGGGATTTTCGATGACCCCGGCAAAGACGATGAGGCGGCGACCTCTGCCAGTGGAGCACGT CCATGA
Upstream 100 bases:
>100_bases CACCGATCTGATCCGCGAGCGTCCGCTGGCCGCCTTCGGCGTTGCCTTCGCCGCTGGCTGGGTCATTGCCAAGCTGGCAC GCAGCAACGACAACTAAGTC
Downstream 100 bases:
>100_bases AATTTGGAACCTTGCGTCAACGCGTCGAACGCGCCGAATATCTGGTCGAAGGACGTGCCCAAGAAACGCGCCTGCATTGG AGCGAACTCCGCCAGACCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MSDQASPAAGTDAPDARAQTPGLDESVRAVGAAGRATLGSAKDTSRALRRLVSADLQLARSAFGRGLAWACVAVVFGASS WLLLAGAIIALLQRAGLSWFQAMFFTALASLLVTGIAAWRVFFYFDHTGMNATRRQLIKLGIFDDPGKDDEAATSASGAR P
Sequences:
>Translated_161_residues MSDQASPAAGTDAPDARAQTPGLDESVRAVGAAGRATLGSAKDTSRALRRLVSADLQLARSAFGRGLAWACVAVVFGASS WLLLAGAIIALLQRAGLSWFQAMFFTALASLLVTGIAAWRVFFYFDHTGMNATRRQLIKLGIFDDPGKDDEAATSASGAR P >Mature_160_residues SDQASPAAGTDAPDARAQTPGLDESVRAVGAAGRATLGSAKDTSRALRRLVSADLQLARSAFGRGLAWACVAVVFGASSW LLLAGAIIALLQRAGLSWFQAMFFTALASLLVTGIAAWRVFFYFDHTGMNATRRQLIKLGIFDDPGKDDEAATSASGARP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16831; Mature: 16700
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDQASPAAGTDAPDARAQTPGLDESVRAVGAAGRATLGSAKDTSRALRRLVSADLQLAR CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHH SAFGRGLAWACVAVVFGASSWLLLAGAIIALLQRAGLSWFQAMFFTALASLLVTGIAAWR HHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH VFFYFDHTGMNATRRQLIKLGIFDDPGKDDEAATSASGARP HHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCCCCCC >Mature Secondary Structure SDQASPAAGTDAPDARAQTPGLDESVRAVGAAGRATLGSAKDTSRALRRLVSADLQLAR CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHH SAFGRGLAWACVAVVFGASSWLLLAGAIIALLQRAGLSWFQAMFFTALASLLVTGIAAWR HHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH VFFYFDHTGMNATRRQLIKLGIFDDPGKDDEAATSASGARP HHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA