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The map label for this gene is ybjZ [H]

Identifier: 21244366

GI number: 21244366

Start: 4319144

End: 4320370

Strand: Direct

Name: ybjZ [H]

Synonym: XAC3641

Alternate gene names: 21244366

Gene position: 4319144-4320370 (Clockwise)

Preceding gene: 21244365

Following gene: 21244367

Centisome position: 83.45

GC content: 61.86

Gene sequence:

>1227_bases
ATGGACATCCGACCCATCATCTCCACCTTGCGCCGCCATAAGACGGCCGCCGCACTGATCGTGCTCGAGATCGCACTGGC
TTGCGCCATTATCTGCAATTCGCTGTTCCTGATCGGCAATCGCCTGGACACGCTCCAGACTCCCAGTGGCATCGCCGAGC
AGGAGCTGCTCAGCATCCAGCTGGACGGCATCGGCCCGCAGGCCAATGCCGATGCACGTACCCGGGAGGATCTGGCAGCG
CTACGCGCGGTGCCCGGCGTGCGCAATGCGGTCATCACCAATCAGATCCCCTTCGTCAATTACTCGTCCAACACGGGGCT
GAGCCTGACCCCGGAGCAGGAACGCCCTACGCTCAATGCCGCGCAGTATCTGGTCAGCGAAGGCAGCCTGGATGCACTTG
GCATGCAATTGGATGCCGGCCGCGACTTCAGCCCGGACGAATACATCAGCCAGGAAAAGGCTGATAACGACGATGAGGTC
CGCAAGAAAGGTGCGGCGGTCATCCTGACGCAGGGGGCGGCGGACAAGATGTTCCCCGACCGCAGCGCGCTCGGCAAGAC
CATCTACTCTGGCGGTGTCCCGCTGCGTATCGTCGGAATCGTGCGCACCCTGGCGCGACCGAACAATGTCAATGGACTGT
CGGCAAAGGACTATTCGATGCTGCTGCCTATCCGTCCTCCTTACACGGATGGGCAATACGTCGTACGTGTCACCGGCCCT
TTGCGTCGGGCGGAAGTGCTGAAGGCGGCAGTGGCGGCTTTGATGAAAGTGGACAACAGCCGGCTGGTGCTGAAACAAGA
GACCTACACCGAAATCCGCGACAAGTATTTCCGCAATGATCGCGCCATGATCTGGCTGCTTGGGGCGGTGTGCGTCGCCC
TGCTGATTGTGACCGCCTTGGGTATCGTCGGCCTGGCGAGTTTCTGGGTGCAGCAACGCACCAAGCAGATCGGTATCCGC
CGTGCGCTGGGTGCAACGCGCAGCCAGATCCTGCGCTACTTCCAGATCGAGAATTTCCTGCTTGCCTCGGTCGGCATCGT
GCTCGGCATGCTGATGGCCTACTCGATCAACGTCTGGCTGATGGCACGCTATGAATTGCCGCGACTGCCGGCAATCTATC
TGCCGATTGGCGCGTTGCTGCTATGGATGCTCGGCCAGCTGGCGGTGTTCTGGCCGGCCCGGCGCGCAGCCGCAGTGCCA
CCGGCTGTGGCCACCCGCAGTGCATGA

Upstream 100 bases:

>100_bases
CGCGCCATCCAGGTCGCACCGGCACTGCAATTGAAGTCGTCCTGAACCTCCTGCCCGCCGCACCGCGGCGAGCCATGCTT
CCTATCTTCAAGGTCAGCCC

Downstream 100 bases:

>100_bases
TGGCCGGCGTTCCTTCGCTGTCACTTGGCGGTGGGGAAGCGACCAGGCTCGCCATCCACCGTGCGTTTCTACCCTCGTTA
CGAACCGGATTCCCTCATGC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MDIRPIISTLRRHKTAAALIVLEIALACAIICNSLFLIGNRLDTLQTPSGIAEQELLSIQLDGIGPQANADARTREDLAA
LRAVPGVRNAVITNQIPFVNYSSNTGLSLTPEQERPTLNAAQYLVSEGSLDALGMQLDAGRDFSPDEYISQEKADNDDEV
RKKGAAVILTQGAADKMFPDRSALGKTIYSGGVPLRIVGIVRTLARPNNVNGLSAKDYSMLLPIRPPYTDGQYVVRVTGP
LRRAEVLKAAVAALMKVDNSRLVLKQETYTEIRDKYFRNDRAMIWLLGAVCVALLIVTALGIVGLASFWVQQRTKQIGIR
RALGATRSQILRYFQIENFLLASVGIVLGMLMAYSINVWLMARYELPRLPAIYLPIGALLLWMLGQLAVFWPARRAAAVP
PAVATRSA

Sequences:

>Translated_408_residues
MDIRPIISTLRRHKTAAALIVLEIALACAIICNSLFLIGNRLDTLQTPSGIAEQELLSIQLDGIGPQANADARTREDLAA
LRAVPGVRNAVITNQIPFVNYSSNTGLSLTPEQERPTLNAAQYLVSEGSLDALGMQLDAGRDFSPDEYISQEKADNDDEV
RKKGAAVILTQGAADKMFPDRSALGKTIYSGGVPLRIVGIVRTLARPNNVNGLSAKDYSMLLPIRPPYTDGQYVVRVTGP
LRRAEVLKAAVAALMKVDNSRLVLKQETYTEIRDKYFRNDRAMIWLLGAVCVALLIVTALGIVGLASFWVQQRTKQIGIR
RALGATRSQILRYFQIENFLLASVGIVLGMLMAYSINVWLMARYELPRLPAIYLPIGALLLWMLGQLAVFWPARRAAAVP
PAVATRSA
>Mature_408_residues
MDIRPIISTLRRHKTAAALIVLEIALACAIICNSLFLIGNRLDTLQTPSGIAEQELLSIQLDGIGPQANADARTREDLAA
LRAVPGVRNAVITNQIPFVNYSSNTGLSLTPEQERPTLNAAQYLVSEGSLDALGMQLDAGRDFSPDEYISQEKADNDDEV
RKKGAAVILTQGAADKMFPDRSALGKTIYSGGVPLRIVGIVRTLARPNNVNGLSAKDYSMLLPIRPPYTDGQYVVRVTGP
LRRAEVLKAAVAALMKVDNSRLVLKQETYTEIRDKYFRNDRAMIWLLGAVCVALLIVTALGIVGLASFWVQQRTKQIGIR
RALGATRSQILRYFQIENFLLASVGIVLGMLMAYSINVWLMARYELPRLPAIYLPIGALLLWMLGQLAVFWPARRAAAVP
PAVATRSA

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 44637; Mature: 44637

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIRPIISTLRRHKTAAALIVLEIALACAIICNSLFLIGNRLDTLQTPSGIAEQELLSIQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHEEEEE
LDGIGPQANADARTREDLAALRAVPGVRNAVITNQIPFVNYSSNTGLSLTPEQERPTLNA
ECCCCCCCCCCCHHHHHHHHHHHCCCCHHHHEECCCCEEEECCCCCCCCCCCCCCCCHHH
AQYLVSEGSLDALGMQLDAGRDFSPDEYISQEKADNDDEVRKKGAAVILTQGAADKMFPD
HHHHHCCCCHHHHCEEECCCCCCCCHHHHHHHCCCCHHHHHHCCCEEEEECCCCCCCCCC
RSALGKTIYSGGVPLRIVGIVRTLARPNNVNGLSAKDYSMLLPIRPPYTDGQYVVRVTGP
HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCC
LRRAEVLKAAVAALMKVDNSRLVLKQETYTEIRDKYFRNDRAMIWLLGAVCVALLIVTAL
HHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
GIVGLASFWVQQRTKQIGIRRALGATRSQILRYFQIENFLLASVGIVLGMLMAYSINVWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE
MARYELPRLPAIYLPIGALLLWMLGQLAVFWPARRAAAVPPAVATRSA
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHCCCC
>Mature Secondary Structure
MDIRPIISTLRRHKTAAALIVLEIALACAIICNSLFLIGNRLDTLQTPSGIAEQELLSIQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHEEEEE
LDGIGPQANADARTREDLAALRAVPGVRNAVITNQIPFVNYSSNTGLSLTPEQERPTLNA
ECCCCCCCCCCCHHHHHHHHHHHCCCCHHHHEECCCCEEEECCCCCCCCCCCCCCCCHHH
AQYLVSEGSLDALGMQLDAGRDFSPDEYISQEKADNDDEVRKKGAAVILTQGAADKMFPD
HHHHHCCCCHHHHCEEECCCCCCCCHHHHHHHCCCCHHHHHHCCCEEEEECCCCCCCCCC
RSALGKTIYSGGVPLRIVGIVRTLARPNNVNGLSAKDYSMLLPIRPPYTDGQYVVRVTGP
HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCC
LRRAEVLKAAVAALMKVDNSRLVLKQETYTEIRDKYFRNDRAMIWLLGAVCVALLIVTAL
HHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
GIVGLASFWVQQRTKQIGIRRALGATRSQILRYFQIENFLLASVGIVLGMLMAYSINVWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE
MARYELPRLPAIYLPIGALLLWMLGQLAVFWPARRAAAVPPAVATRSA
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 10568751; 3145906 [H]