Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
---|---|
Accession | NC_003919 |
Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21244340
Identifier: 21244340
GI number: 21244340
Start: 4289570
End: 4289905
Strand: Direct
Name: 21244340
Synonym: XAC3615
Alternate gene names: NA
Gene position: 4289570-4289905 (Clockwise)
Preceding gene: 21244339
Following gene: 21244342
Centisome position: 82.88
GC content: 59.52
Gene sequence:
>336_bases ATGTCGGCGCAGTTCGAAAACAGTTTCACCAGCCAGTTCGCTTCTGCCGCAGCACGTGCCAACCAGTTGGCATTGGAAAC GCTGGAACGCAACGTCAACGCAACCAGCAGCTTTTTCGGCGAGTTTGCGCAGGCGCGCGATCTGGGCGCGTATCAGACGC TTTGGCCGAAAGGCCTGCAGGTAGCGCGCGACAACCTGGAACGCTTGGCCTCGGTCAACCAGGAAGTGGTCGGGCTGGGA TTGAAGATGTCCAGCGAGCTTGGGCAGTTTGCCAAGCAACAGTTCGAAAACGGCAGCGATCAGGCCGGCGCATCAGGCAA GACCCGGCGTGAGTAA
Upstream 100 bases:
>100_bases CAGCTGTTTCGAAAATCTTCAGCAAACGTGTTGCATCGCAACAATATGGGTGTATGCTGCAACGCAACAAACGGTCACGG CTTTCCCCAAGGGGTTCGCA
Downstream 100 bases:
>100_bases GCGCCAATAAAATTCAGCGTCTTTGCATGGGTCCCTCCCCCCGTGCAATCCGGCCCGACAGATCCCTCCCTCTGTCGGGC TTTTTTATTGCCTGCGCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MSAQFENSFTSQFASAAARANQLALETLERNVNATSSFFGEFAQARDLGAYQTLWPKGLQVARDNLERLASVNQEVVGLG LKMSSELGQFAKQQFENGSDQAGASGKTRRE
Sequences:
>Translated_111_residues MSAQFENSFTSQFASAAARANQLALETLERNVNATSSFFGEFAQARDLGAYQTLWPKGLQVARDNLERLASVNQEVVGLG LKMSSELGQFAKQQFENGSDQAGASGKTRRE >Mature_110_residues SAQFENSFTSQFASAAARANQLALETLERNVNATSSFFGEFAQARDLGAYQTLWPKGLQVARDNLERLASVNQEVVGLGL KMSSELGQFAKQQFENGSDQAGASGKTRRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12080; Mature: 11949
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAQFENSFTSQFASAAARANQLALETLERNVNATSSFFGEFAQARDLGAYQTLWPKGLQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHCHHHHH VARDNLERLASVNQEVVGLGLKMSSELGQFAKQQFENGSDQAGASGKTRRE HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SAQFENSFTSQFASAAARANQLALETLERNVNATSSFFGEFAQARDLGAYQTLWPKGLQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHCHHHHH VARDNLERLASVNQEVVGLGLKMSSELGQFAKQQFENGSDQAGASGKTRRE HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA