Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21244321
Identifier: 21244321
GI number: 21244321
Start: 4263865
End: 4265610
Strand: Direct
Name: 21244321
Synonym: XAC3596
Alternate gene names: NA
Gene position: 4263865-4265610 (Clockwise)
Preceding gene: 21244320
Following gene: 21244332
Centisome position: 82.38
GC content: 60.6
Gene sequence:
>1746_bases ATGAATCAGGCAGCTCAACAGAGCGCGCCATCACGGCTGCGCGACAGGACGCTGGCTGCGTTCACATTGATGGTGTCGCA GCCCGCGCTTGCGGCGATCGCCGCATTGGCCGCTCTTTATGCGCTCTTGGCCGTAGTGGGTGGAATTCTCACGTTCAGCC CCGTCCCGTTCTGGGACATGTGGGATGGCGGACTGGGATTTTATGTCCGCCAGATGACCGATGTCTCGCAGTGGTGGGCG CAGCACAACGAACATCGCATCGTGCTGTCCAGGATCCTTTTCTTCCTCGACTATCGCTATTTCGATAGCAATGGCGCCGT GCTGGTTGTTATCAACTACCTGCTTGCGTGCTCGACCTTTGGGCTACTCGCTTGGTGCGCCCTGCAACGCGACGCAAGCC GGAGACGGGATGGGCGCATGATCGCAGCCTTCATCTTGTGCTGCGCACTGCTGTGGACCCAAAGCAACAACCTGACATGG GCATTCCAGAGTCAGTTCTTCCTCGCGAATCTACTCCCCCTGCTCGCCCTGGTGTTGCTGCATGCCTCATGCCGCACGCG CATTCGCGGAAATGCCATCGTGTTCCTGGCAGCCCTGACCGTGGCCGCAATGGCAGCCGTCAGCATGGCAAATGGTGTGT TGGCGGGGGGCGTCGTCGCTGCCGCCTGCCTGCTGGGGCGCCAAAGCTGGCGTCGCAATCTGCTGGCCTGGGCGGTGGCG ATTGCCGTTCCGGCATTGTACTTCCACCACTACACGGCACCCGCCGGACATGGCTCGATCCTCGCATCGCTTCGGACTGA GCCGCTCGAAGTCATCAAGTTCTTCTTCGCGTACATCGGCAGCCCGTTCGCCCACTTGGACGCGAGTGGCCCGCTCCATC TCGGCTGGGCCATCCTCGCCGGTGTGGTGCTATTAACTGCAGGAGCGATCCTGGCCTGGCGCACGATATTCAAGCGCCAT GACACGGTTGATGTCGATCTTGTCGTCACCCTTTTCCTTGGGTACCTCGTCGCCTCCGCATTTGCGACGGCGGGTAGCCG AGCGCTGTTTGGCCTCGATGCCGCCGTGGCGAGTCGCTACACGACACCTGGCCTATTGGTGCTTGGTTGCGTCCTGATCT TGGCATCACGAAACTTCTTTCGCGATCGCGCGCTGACCATGCCTTATCAGATCGGCCTGGCGCTGATGGCGCTCGCCTTC CTGCCTTCGCAGTTGACAGCGACGCGTCCGCAACCTTATCTGGACTTCGAGTGGCGTTTCGCCGCCCTGGCGCTCGAATT GGGAGTCAAGGATGACAAGCAGATCGGGTGGATTTTCCCCGACGCAGCTTGGGCACAGAAAATCGCCGAGCCTGCCGCGA ACATGGGTCTCGGCATATTCGCGAAGCCCGGGATTTACGATGCGAAACTTACCTTGGGCGGCAGCTATCCCACGTCATCA CTGCAGACCTGTAGCTTGGCCGGGCTGGAAAACGAGGCTGTCGATGCGTCGACGAACGACTGGATCCGCTTGAAGGGCGG ACTGATGAATTCCATCCTGCCTCGGAAGATATCCACCGTATTGCTGGTGGACGCAAACAACACCATCGTGGGTCGAGGCC TGCTGGCCGAGCCCAAACAGGATAGCCCGGGCGCGCCCTTCGGCGCTCCCTTCAAGGCCTACCTGATGGGACGCGCACAA CCAGCCGTTTACAAGATCGTAATACCGGGATTTTGCACGACCACGGTCGCCCCCAAGAGCCAATAG
Upstream 100 bases:
>100_bases TGAACTTTTATCCTCAGGCCGTTGCTCATGCGATAGGCGTCATTGCCCCGGTTGCAATCAGCTATCTGGGCCACAAGCAT TTCACTTTTCGGGGGCATCG
Downstream 100 bases:
>100_bases GATTCGAGGATTGGAACTCGCGTGGGCACAGGATCACTACACTGGCCCGCGCCATTTCCACAGGTGCTCCAGGGTCTAGG CTCCGACATCGACACGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 581; Mature: 581
Protein sequence:
>581_residues MNQAAQQSAPSRLRDRTLAAFTLMVSQPALAAIAALAALYALLAVVGGILTFSPVPFWDMWDGGLGFYVRQMTDVSQWWA QHNEHRIVLSRILFFLDYRYFDSNGAVLVVINYLLACSTFGLLAWCALQRDASRRRDGRMIAAFILCCALLWTQSNNLTW AFQSQFFLANLLPLLALVLLHASCRTRIRGNAIVFLAALTVAAMAAVSMANGVLAGGVVAAACLLGRQSWRRNLLAWAVA IAVPALYFHHYTAPAGHGSILASLRTEPLEVIKFFFAYIGSPFAHLDASGPLHLGWAILAGVVLLTAGAILAWRTIFKRH DTVDVDLVVTLFLGYLVASAFATAGSRALFGLDAAVASRYTTPGLLVLGCVLILASRNFFRDRALTMPYQIGLALMALAF LPSQLTATRPQPYLDFEWRFAALALELGVKDDKQIGWIFPDAAWAQKIAEPAANMGLGIFAKPGIYDAKLTLGGSYPTSS LQTCSLAGLENEAVDASTNDWIRLKGGLMNSILPRKISTVLLVDANNTIVGRGLLAEPKQDSPGAPFGAPFKAYLMGRAQ PAVYKIVIPGFCTTTVAPKSQ
Sequences:
>Translated_581_residues MNQAAQQSAPSRLRDRTLAAFTLMVSQPALAAIAALAALYALLAVVGGILTFSPVPFWDMWDGGLGFYVRQMTDVSQWWA QHNEHRIVLSRILFFLDYRYFDSNGAVLVVINYLLACSTFGLLAWCALQRDASRRRDGRMIAAFILCCALLWTQSNNLTW AFQSQFFLANLLPLLALVLLHASCRTRIRGNAIVFLAALTVAAMAAVSMANGVLAGGVVAAACLLGRQSWRRNLLAWAVA IAVPALYFHHYTAPAGHGSILASLRTEPLEVIKFFFAYIGSPFAHLDASGPLHLGWAILAGVVLLTAGAILAWRTIFKRH DTVDVDLVVTLFLGYLVASAFATAGSRALFGLDAAVASRYTTPGLLVLGCVLILASRNFFRDRALTMPYQIGLALMALAF LPSQLTATRPQPYLDFEWRFAALALELGVKDDKQIGWIFPDAAWAQKIAEPAANMGLGIFAKPGIYDAKLTLGGSYPTSS LQTCSLAGLENEAVDASTNDWIRLKGGLMNSILPRKISTVLLVDANNTIVGRGLLAEPKQDSPGAPFGAPFKAYLMGRAQ PAVYKIVIPGFCTTTVAPKSQ >Mature_581_residues MNQAAQQSAPSRLRDRTLAAFTLMVSQPALAAIAALAALYALLAVVGGILTFSPVPFWDMWDGGLGFYVRQMTDVSQWWA QHNEHRIVLSRILFFLDYRYFDSNGAVLVVINYLLACSTFGLLAWCALQRDASRRRDGRMIAAFILCCALLWTQSNNLTW AFQSQFFLANLLPLLALVLLHASCRTRIRGNAIVFLAALTVAAMAAVSMANGVLAGGVVAAACLLGRQSWRRNLLAWAVA IAVPALYFHHYTAPAGHGSILASLRTEPLEVIKFFFAYIGSPFAHLDASGPLHLGWAILAGVVLLTAGAILAWRTIFKRH DTVDVDLVVTLFLGYLVASAFATAGSRALFGLDAAVASRYTTPGLLVLGCVLILASRNFFRDRALTMPYQIGLALMALAF LPSQLTATRPQPYLDFEWRFAALALELGVKDDKQIGWIFPDAAWAQKIAEPAANMGLGIFAKPGIYDAKLTLGGSYPTSS LQTCSLAGLENEAVDASTNDWIRLKGGLMNSILPRKISTVLLVDANNTIVGRGLLAEPKQDSPGAPFGAPFKAYLMGRAQ PAVYKIVIPGFCTTTVAPKSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62833; Mature: 62833
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQAAQQSAPSRLRDRTLAAFTLMVSQPALAAIAALAALYALLAVVGGILTFSPVPFWDM CCCHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC WDGGLGFYVRQMTDVSQWWAQHNEHRIVLSRILFFLDYRYFDSNGAVLVVINYLLACSTF CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCCCCEEHHHHHHHHHHHH GLLAWCALQRDASRRRDGRMIAAFILCCALLWTQSNNLTWAFQSQFFLANLLPLLALVLL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHH HASCRTRIRGNAIVFLAALTVAAMAAVSMANGVLAGGVVAAACLLGRQSWRRNLLAWAVA HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAVPALYFHHYTAPAGHGSILASLRTEPLEVIKFFFAYIGSPFAHLDASGPLHLGWAILA HHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHH GVVLLTAGAILAWRTIFKRHDTVDVDLVVTLFLGYLVASAFATAGSRALFGLDAAVASRY HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC TTPGLLVLGCVLILASRNFFRDRALTMPYQIGLALMALAFLPSQLTATRPQPYLDFEWRF CCCHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHH AALALELGVKDDKQIGWIFPDAAWAQKIAEPAANMGLGIFAKPGIYDAKLTLGGSYPTSS HHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEECCCCEEEEEEECCCCCCCC LQTCSLAGLENEAVDASTNDWIRLKGGLMNSILPRKISTVLLVDANNTIVGRGLLAEPKQ CCHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCEEEEEECCCEEEECCCCCCCCC DSPGAPFGAPFKAYLMGRAQPAVYKIVIPGFCTTTVAPKSQ CCCCCCCCCCHHHHHHCCCCCCEEEEEECCCEECCCCCCCC >Mature Secondary Structure MNQAAQQSAPSRLRDRTLAAFTLMVSQPALAAIAALAALYALLAVVGGILTFSPVPFWDM CCCHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC WDGGLGFYVRQMTDVSQWWAQHNEHRIVLSRILFFLDYRYFDSNGAVLVVINYLLACSTF CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCCCCEEHHHHHHHHHHHH GLLAWCALQRDASRRRDGRMIAAFILCCALLWTQSNNLTWAFQSQFFLANLLPLLALVLL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHH HASCRTRIRGNAIVFLAALTVAAMAAVSMANGVLAGGVVAAACLLGRQSWRRNLLAWAVA HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAVPALYFHHYTAPAGHGSILASLRTEPLEVIKFFFAYIGSPFAHLDASGPLHLGWAILA HHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHH GVVLLTAGAILAWRTIFKRHDTVDVDLVVTLFLGYLVASAFATAGSRALFGLDAAVASRY HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC TTPGLLVLGCVLILASRNFFRDRALTMPYQIGLALMALAFLPSQLTATRPQPYLDFEWRF CCCHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHH AALALELGVKDDKQIGWIFPDAAWAQKIAEPAANMGLGIFAKPGIYDAKLTLGGSYPTSS HHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEECCCCEEEEEEECCCCCCCC LQTCSLAGLENEAVDASTNDWIRLKGGLMNSILPRKISTVLLVDANNTIVGRGLLAEPKQ CCHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCEEEEEECCCEEEECCCCCCCCC DSPGAPFGAPFKAYLMGRAQPAVYKIVIPGFCTTTVAPKSQ CCCCCCCCCCHHHHHHCCCCCCEEEEEECCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA