Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is gtrB [C]
Identifier: 21244251
GI number: 21244251
Start: 4170500
End: 4171339
Strand: Reverse
Name: gtrB [C]
Synonym: XAC3526
Alternate gene names: 21244251
Gene position: 4171339-4170500 (Counterclockwise)
Preceding gene: 21244252
Following gene: 21244250
Centisome position: 80.6
GC content: 65.95
Gene sequence:
>840_bases ATGACTCCCGTCCAGATCGCCGCCGTCGTCGTCACCTATGAAAGCAGCAGCACCATCGATGCGTGCCTGTCGCGATTGCG CGCGGCCGAGGGCATCAGCGAGATCCGGGTGGTCGACAACGCTTCCAGCGACGACACCCTGGAAGTGGTGCAGCGTCATG CCTTGGCCGATGCGCGGCTGCATTTCATCGCCAATCCCGATAACCCTGGTTTTGCGACTGCCTGCAACCAGGGCGCGCGC GATTCGCAGGCGCCCTGGCTGGTCTTCATCAACCCGGACCTGATGATCGCGCGCGATACCTTGCTGCAGCTGTACCACCG GGCAGCGGGGCATCCGGCGGTGCTGTTGGGGGTGGAGCAGGTGGATGAGCAGGGGCGCCCTGATGCGGCTGTGCGCCGCC GCGACCCGGACTTTGCCGCGATGCTGCGCGCGCCGCGCGCCGCCGCCAATCTGGCGGTGCCGGCCGATCCGTCGCGGGCC TTGCAGCCGGTGGATGCGATCTCCGGGGCGTTGATGCTGATGCAGCGCAGCCTGTTCGACCGGCTGGACGGCTGGGACGG CAGTTACCGGCTGCATGCTGAAGACCTGGATCTGTGCCGGCGCGCCCGCCAGGCTGGTGCGCTGGTGGCGGTGGCCAATG ATCTGCATGTGCTACACGTACGCGGGGTCTCCAGCCGCGCGCGGCCGTTCTTCGTGGAATGGCACAAACATCGTGGATTG TGGCGCTATTTTCGTAAATTCGAGGCTGATCGGCGCGGGCTGCTGACGCGGCTTGGGGTGTGGCTTGCGATCTGGAGTCA CGCAGCCGCACAGGTGCCGCGTTTGTTGCAAAACAAATGA
Upstream 100 bases:
>100_bases CCGGCCCTCGACGCAATGCAGTCGCGGCAGCGCCTGTCGCGCAGCGTGCATTGCGAACCCACGATGGCGCTGCGCCGCTC CGGCACCGGATAATGGCCGG
Downstream 100 bases:
>100_bases GTTGGATCGCGTTAAATTTGTGATAAATCGGTGATGGGTCGTCGGCTGCAACTGTGATACGTTTCGCCCCGAAGTGTGAT CAACCCTAGCTTCCTGTCCC
Product: glycosyl transferase
Products: NA
Alternate protein names: Glycosyl Transferase; Family 2 Glycosyl Transferase; Rhamnosyl Transferase; Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Glycosyl Transferase Family 2 Protein; Glycosyl Transferase Protein
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MTPVQIAAVVVTYESSSTIDACLSRLRAAEGISEIRVVDNASSDDTLEVVQRHALADARLHFIANPDNPGFATACNQGAR DSQAPWLVFINPDLMIARDTLLQLYHRAAGHPAVLLGVEQVDEQGRPDAAVRRRDPDFAAMLRAPRAAANLAVPADPSRA LQPVDAISGALMLMQRSLFDRLDGWDGSYRLHAEDLDLCRRARQAGALVAVANDLHVLHVRGVSSRARPFFVEWHKHRGL WRYFRKFEADRRGLLTRLGVWLAIWSHAAAQVPRLLQNK
Sequences:
>Translated_279_residues MTPVQIAAVVVTYESSSTIDACLSRLRAAEGISEIRVVDNASSDDTLEVVQRHALADARLHFIANPDNPGFATACNQGAR DSQAPWLVFINPDLMIARDTLLQLYHRAAGHPAVLLGVEQVDEQGRPDAAVRRRDPDFAAMLRAPRAAANLAVPADPSRA LQPVDAISGALMLMQRSLFDRLDGWDGSYRLHAEDLDLCRRARQAGALVAVANDLHVLHVRGVSSRARPFFVEWHKHRGL WRYFRKFEADRRGLLTRLGVWLAIWSHAAAQVPRLLQNK >Mature_278_residues TPVQIAAVVVTYESSSTIDACLSRLRAAEGISEIRVVDNASSDDTLEVVQRHALADARLHFIANPDNPGFATACNQGARD SQAPWLVFINPDLMIARDTLLQLYHRAAGHPAVLLGVEQVDEQGRPDAAVRRRDPDFAAMLRAPRAAANLAVPADPSRAL QPVDAISGALMLMQRSLFDRLDGWDGSYRLHAEDLDLCRRARQAGALVAVANDLHVLHVRGVSSRARPFFVEWHKHRGLW RYFRKFEADRRGLLTRLGVWLAIWSHAAAQVPRLLQNK
Specific function: Unknown
COG id: COG1216
COG function: function code R; Predicted glycosyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30969; Mature: 30837
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPVQIAAVVVTYESSSTIDACLSRLRAAEGISEIRVVDNASSDDTLEVVQRHALADARL CCCCEEEEEEEEECCCCCHHHHHHHHHHHCCHHHEEEECCCCCCHHHHHHHHHHHHHCEE HFIANPDNPGFATACNQGARDSQAPWLVFINPDLMIARDTLLQLYHRAAGHPAVLLGVEQ EEEECCCCCCHHHHCCCCCCCCCCCEEEEECCCEEHHHHHHHHHHHHHCCCCEEEEEHHH VDEQGRPDAAVRRRDPDFAAMLRAPRAAANLAVPADPSRALQPVDAISGALMLMQRSLFD HHCCCCCCHHHHCCCCCHHHHHHCCHHHCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHH RLDGWDGSYRLHAEDLDLCRRARQAGALVAVANDLHVLHVRGVSSRARPFFVEWHKHRGL HHCCCCCCEEEEHHHHHHHHHHHHCCEEEEEECCEEEEEEECCCCCCCEEEEEEHHCCCH WRYFRKFEADRRGLLTRLGVWLAIWSHAAAQVPRLLQNK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TPVQIAAVVVTYESSSTIDACLSRLRAAEGISEIRVVDNASSDDTLEVVQRHALADARL CCCEEEEEEEEECCCCCHHHHHHHHHHHCCHHHEEEECCCCCCHHHHHHHHHHHHHCEE HFIANPDNPGFATACNQGARDSQAPWLVFINPDLMIARDTLLQLYHRAAGHPAVLLGVEQ EEEECCCCCCHHHHCCCCCCCCCCCEEEEECCCEEHHHHHHHHHHHHHCCCCEEEEEHHH VDEQGRPDAAVRRRDPDFAAMLRAPRAAANLAVPADPSRALQPVDAISGALMLMQRSLFD HHCCCCCCHHHHCCCCCHHHHHHCCHHHCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHH RLDGWDGSYRLHAEDLDLCRRARQAGALVAVANDLHVLHVRGVSSRARPFFVEWHKHRGL HHCCCCCCEEEEHHHHHHHHHHHHCCEEEEEECCEEEEEEECCCCCCCEEEEEEHHCCCH WRYFRKFEADRRGLLTRLGVWLAIWSHAAAQVPRLLQNK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA