Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
---|---|
Accession | NC_003919 |
Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21244248
Identifier: 21244248
GI number: 21244248
Start: 4166074
End: 4167471
Strand: Reverse
Name: 21244248
Synonym: XAC3523
Alternate gene names: NA
Gene position: 4167471-4166074 (Counterclockwise)
Preceding gene: 77748725
Following gene: 21244247
Centisome position: 80.52
GC content: 68.67
Gene sequence:
>1398_bases ATGGCATCAGCAAGCATTCGGAAAACGAGCGCCGCGCCGCACTCGAAGAGTGAGCCGGTTGCGCAGCGTCGCGAGAGCGG GCTGCCGGCGTTCCTCATCGCCGTGGTGGCGCTGTCGCTGCTGAGCCAGCCGTTGCTGGTGCAGTCGGTGGCCACGGTGC CCGCGCTTGTGCCGGACATCGGCGTGCCGGCGACCGGCTTGTTGGCGTGGGCGGTCGATCTCACCCTGCACCGCTGGAAT CTGCCGTTCCAGGTCTGGCCATGCGTTGCGGTGGCTGCCAACGCGCTGTTCCTGTCGCTGCTGTGGCGCGATCTGGCTGG CGTGTTCGGGCGCGGCTGGGCCAGCGCTCTGACGCTGCTGGTGGGCTGCAACCCGCTGTTCCTGCTGCCGATCGCCGCCG GCGGCAGCCAGGCAGTGGGGTTGCTGGCCTTCTACGGTTTGTGCCGCACCTTGCGCCGCTTGCAGGCGCCGGTGGAAGCC TTCACCTATCTGCGCATTGCCGGTTGGTTGTGCATTTTGCTGTGCCTGGATCTGCAGACGCTGGCGCTGTCGACAATGGT CGCGCCATGGCTGCTGCTGGTCATGCCGCCACAGATGCTGCGCAAGGCACCGGGCTCGTTCTACCTGGTGTGCTATCTGC CGTTCGCGTTCCTGGTCGGCATGTGGGCCTACGTCAATCTGGTCGTGTTCAATGCGCCGTGGCCGACGCTGTCCAGCATC GCCCAGGCGTCGCATCCGTTGCCGCTGCCACTGGCCGGCCATGCCGACGGCTGGTTGCCGGCGGTCCGCTGGGGTGTGGC GGCCGCGGTGTGCTTCCCGGTGCTTGCGCTGGTGGCGCGTGCGCGCAGCGGTGCGTTGGCGCGTGGCGTGGTGGCCAGTG CCGGCACCGTGATCTGCGCGGCTGCGTTGTCGTTCGCGTTCGGCTGGGCTGGCTTCGATGCCCTGCTGTTGTTGTGGGTG CCGGCGGCGCTGTTGCTGCGTGCGCTGCACGCCGACCAACGCGGCCAGGCGGCCGGATTGCTGGTGCTGGGCCTGGCGGG TGCGATCTGGGCACAGCCGCAGGGTTGGGGCAGCTGGATGCGTGCCGCAGCGCCCGACGAACAGGCCTTGATGCAGGGCG AGGCCGTTGTCATGACGACGCCGGTATCGTTGCCGCTGCGTGCATCGGACGCTCCCGCGACGCAGGATGTTGATGTAGGG CAGTCGGCGATGGCCGAGAGCGCTGCGGTGGCCCCGGCTGCAACGGCAACTGACCACACTGCCGAGCCGGCCAACCCGTC GGTGGCCACGGTGGCGCCGCAGGACAAGAACAATGCATCGTTGCGTGCGACGGCGTGCTCCCGGCACGCGGCGCCGCCGA ATGCCGAGGTGTCTGCTGCATGTTCAAGCGCGTTCTAA
Upstream 100 bases:
>100_bases GCACTGACGGTGCCGTTCTACTGGGCGTTGCAGTCGATCGCCGCCTACAAGGGTCTCTGGCAGCTGATCCACAATCCGTT CTATTGGGAGAAGACCACGC
Downstream 100 bases:
>100_bases GCGTCGCAATGTTGATCGGCGTGTGTCTGCTGGCAAACGGCTGCAATGCGGCCGCGCCGACCTGGATGGGCGCCAATGTC AAGGTCTCCGCCAACGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 465; Mature: 464
Protein sequence:
>465_residues MASASIRKTSAAPHSKSEPVAQRRESGLPAFLIAVVALSLLSQPLLVQSVATVPALVPDIGVPATGLLAWAVDLTLHRWN LPFQVWPCVAVAANALFLSLLWRDLAGVFGRGWASALTLLVGCNPLFLLPIAAGGSQAVGLLAFYGLCRTLRRLQAPVEA FTYLRIAGWLCILLCLDLQTLALSTMVAPWLLLVMPPQMLRKAPGSFYLVCYLPFAFLVGMWAYVNLVVFNAPWPTLSSI AQASHPLPLPLAGHADGWLPAVRWGVAAAVCFPVLALVARARSGALARGVVASAGTVICAAALSFAFGWAGFDALLLLWV PAALLLRALHADQRGQAAGLLVLGLAGAIWAQPQGWGSWMRAAAPDEQALMQGEAVVMTTPVSLPLRASDAPATQDVDVG QSAMAESAAVAPAATATDHTAEPANPSVATVAPQDKNNASLRATACSRHAAPPNAEVSAACSSAF
Sequences:
>Translated_465_residues MASASIRKTSAAPHSKSEPVAQRRESGLPAFLIAVVALSLLSQPLLVQSVATVPALVPDIGVPATGLLAWAVDLTLHRWN LPFQVWPCVAVAANALFLSLLWRDLAGVFGRGWASALTLLVGCNPLFLLPIAAGGSQAVGLLAFYGLCRTLRRLQAPVEA FTYLRIAGWLCILLCLDLQTLALSTMVAPWLLLVMPPQMLRKAPGSFYLVCYLPFAFLVGMWAYVNLVVFNAPWPTLSSI AQASHPLPLPLAGHADGWLPAVRWGVAAAVCFPVLALVARARSGALARGVVASAGTVICAAALSFAFGWAGFDALLLLWV PAALLLRALHADQRGQAAGLLVLGLAGAIWAQPQGWGSWMRAAAPDEQALMQGEAVVMTTPVSLPLRASDAPATQDVDVG QSAMAESAAVAPAATATDHTAEPANPSVATVAPQDKNNASLRATACSRHAAPPNAEVSAACSSAF >Mature_464_residues ASASIRKTSAAPHSKSEPVAQRRESGLPAFLIAVVALSLLSQPLLVQSVATVPALVPDIGVPATGLLAWAVDLTLHRWNL PFQVWPCVAVAANALFLSLLWRDLAGVFGRGWASALTLLVGCNPLFLLPIAAGGSQAVGLLAFYGLCRTLRRLQAPVEAF TYLRIAGWLCILLCLDLQTLALSTMVAPWLLLVMPPQMLRKAPGSFYLVCYLPFAFLVGMWAYVNLVVFNAPWPTLSSIA QASHPLPLPLAGHADGWLPAVRWGVAAAVCFPVLALVARARSGALARGVVASAGTVICAAALSFAFGWAGFDALLLLWVP AALLLRALHADQRGQAAGLLVLGLAGAIWAQPQGWGSWMRAAAPDEQALMQGEAVVMTTPVSLPLRASDAPATQDVDVGQ SAMAESAAVAPAATATDHTAEPANPSVATVAPQDKNNASLRATACSRHAAPPNAEVSAACSSAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48466; Mature: 48335
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: PS00079 MULTICOPPER_OXIDASE1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASASIRKTSAAPHSKSEPVAQRRESGLPAFLIAVVALSLLSQPLLVQSVATVPALVPDI CCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC GVPATGLLAWAVDLTLHRWNLPFQVWPCVAVAANALFLSLLWRDLAGVFGRGWASALTLL CCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH VGCNPLFLLPIAAGGSQAVGLLAFYGLCRTLRRLQAPVEAFTYLRIAGWLCILLCLDLQT HCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LALSTMVAPWLLLVMPPQMLRKAPGSFYLVCYLPFAFLVGMWAYVNLVVFNAPWPTLSSI HHHHHHHHHHHHHHCCHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHEEEECCCCCHHHHH AQASHPLPLPLAGHADGWLPAVRWGVAAAVCFPVLALVARARSGALARGVVASAGTVICA HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH AALSFAFGWAGFDALLLLWVPAALLLRALHADQRGQAAGLLVLGLAGAIWAQPQGWGSWM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHH RAAAPDEQALMQGEAVVMTTPVSLPLRASDAPATQDVDVGQSAMAESAAVAPAATATDHT HCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC AEPANPSVATVAPQDKNNASLRATACSRHAAPPNAEVSAACSSAF CCCCCCCEEEECCCCCCCCCEEEEHHHCCCCCCCCHHHHHHHCCC >Mature Secondary Structure ASASIRKTSAAPHSKSEPVAQRRESGLPAFLIAVVALSLLSQPLLVQSVATVPALVPDI CCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC GVPATGLLAWAVDLTLHRWNLPFQVWPCVAVAANALFLSLLWRDLAGVFGRGWASALTLL CCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH VGCNPLFLLPIAAGGSQAVGLLAFYGLCRTLRRLQAPVEAFTYLRIAGWLCILLCLDLQT HCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LALSTMVAPWLLLVMPPQMLRKAPGSFYLVCYLPFAFLVGMWAYVNLVVFNAPWPTLSSI HHHHHHHHHHHHHHCCHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHEEEECCCCCHHHHH AQASHPLPLPLAGHADGWLPAVRWGVAAAVCFPVLALVARARSGALARGVVASAGTVICA HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH AALSFAFGWAGFDALLLLWVPAALLLRALHADQRGQAAGLLVLGLAGAIWAQPQGWGSWM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHH RAAAPDEQALMQGEAVVMTTPVSLPLRASDAPATQDVDVGQSAMAESAAVAPAATATDHT HCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC AEPANPSVATVAPQDKNNASLRATACSRHAAPPNAEVSAACSSAF CCCCCCCEEEECCCCCCCCCEEEEHHHCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA