Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
---|---|
Accession | NC_003919 |
Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is celS
Identifier: 21244232
GI number: 21244232
Start: 4145943
End: 4146542
Strand: Reverse
Name: celS
Synonym: XAC3507
Alternate gene names: NA
Gene position: 4146542-4145943 (Counterclockwise)
Preceding gene: 21244233
Following gene: 21244231
Centisome position: 80.12
GC content: 62.83
Gene sequence:
>600_bases ATGCACAACTGCCCATCCAGCTCCCTTGTCCAGACGCGCGCCCAGGCGCCGGCCCCGCGGCGGCGCGCCGCGCGCTGGTG GACCGCGGCGCTCGCCTTCGGTCTGGTCGCGCTCACCCCGGTGGCGCTCGCCGGCCCGTACAAGATCTTTGGCAACCACT ATGCGTGGGTGAACAATTTCAACGATCCCAACAACATCATCCAGGGCACGTTCGGCACCGGCAGTACGCCGGAGTTGACG GTCACCTTCAACTTCGCCGACTACAACCTCTACGGCTATCCCGCGATCGTGCGCGGCTGGCATTACGACTGGAATCCGAC CACCGACACGCTGTTCCCCAAGCAGATCTCCTCGATCGGCTCGCTGCCATTCAAATTCAATTACAGCGCAGGCGGCACCA ATTTGGCCGGTGATTTCGCCTACGACATCTTCTTTCGCTGGGACACCGCAAAGGGCAATCCGCAGCTGGAAGTGATGATC TGGGGCGACCACAACTCCTGGCCGGTCGGCACCGTGACCGCGACCAAGGTCATCACCGCGGGCGGGCGTACCTTCGACCT GTGGGAAGGCTTCAATTCCGGCGCCGGCTATTACGTCTAA
Upstream 100 bases:
>100_bases CCGCGCGGTGCCGCTGCTAGGGTCCAACCCCGACTGCCGCACGGCAGGTCCCGACAGCGCTGCACCAGCGCCGCCGCGTT GAATCATACGGAGAGTCACT
Downstream 100 bases:
>100_bases ACCTTCATCCCGACCGGGACCGCCGGCCAGCCGACGCTCAAGACCAGCGGCAGCCTCAACGTGGATGCCAAGCCGTTTCT GACCTGGCTGCAGAACAACC
Product: truncated cellulase S
Products: NA
Alternate protein names: Cellulase
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MHNCPSSSLVQTRAQAPAPRRRAARWWTAALAFGLVALTPVALAGPYKIFGNHYAWVNNFNDPNNIIQGTFGTGSTPELT VTFNFADYNLYGYPAIVRGWHYDWNPTTDTLFPKQISSIGSLPFKFNYSAGGTNLAGDFAYDIFFRWDTAKGNPQLEVMI WGDHNSWPVGTVTATKVITAGGRTFDLWEGFNSGAGYYV
Sequences:
>Translated_199_residues MHNCPSSSLVQTRAQAPAPRRRAARWWTAALAFGLVALTPVALAGPYKIFGNHYAWVNNFNDPNNIIQGTFGTGSTPELT VTFNFADYNLYGYPAIVRGWHYDWNPTTDTLFPKQISSIGSLPFKFNYSAGGTNLAGDFAYDIFFRWDTAKGNPQLEVMI WGDHNSWPVGTVTATKVITAGGRTFDLWEGFNSGAGYYV >Mature_199_residues MHNCPSSSLVQTRAQAPAPRRRAARWWTAALAFGLVALTPVALAGPYKIFGNHYAWVNNFNDPNNIIQGTFGTGSTPELT VTFNFADYNLYGYPAIVRGWHYDWNPTTDTLFPKQISSIGSLPFKFNYSAGGTNLAGDFAYDIFFRWDTAKGNPQLEVMI WGDHNSWPVGTVTATKVITAGGRTFDLWEGFNSGAGYYV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22020; Mature: 22020
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNCPSSSLVQTRAQAPAPRRRAARWWTAALAFGLVALTPVALAGPYKIFGNHYAWVNNF CCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEECC NDPNNIIQGTFGTGSTPELTVTFNFADYNLYGYPAIVRGWHYDWNPTTDTLFPKQISSIG CCCCCEEEECCCCCCCCEEEEEEEEECCEEECCCHHEECCCCCCCCCCCCCCHHHHHHHC SLPFKFNYSAGGTNLAGDFAYDIFFRWDTAKGNPQLEVMIWGDHNSWPVGTVTATKVITA CCCEEEEECCCCCCCCCCEEEEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEEEEC GGRTFDLWEGFNSGAGYYV CCCEEEECCCCCCCCCCCC >Mature Secondary Structure MHNCPSSSLVQTRAQAPAPRRRAARWWTAALAFGLVALTPVALAGPYKIFGNHYAWVNNF CCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEECC NDPNNIIQGTFGTGSTPELTVTFNFADYNLYGYPAIVRGWHYDWNPTTDTLFPKQISSIG CCCCCEEEECCCCCCCCEEEEEEEEECCEEECCCHHEECCCCCCCCCCCCCCHHHHHHHC SLPFKFNYSAGGTNLAGDFAYDIFFRWDTAKGNPQLEVMIWGDHNSWPVGTVTATKVITA CCCEEEEECCCCCCCCCCEEEEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEEEEC GGRTFDLWEGFNSGAGYYV CCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA