Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21244105
Identifier: 21244105
GI number: 21244105
Start: 3984572
End: 3985348
Strand: Reverse
Name: 21244105
Synonym: XAC3380
Alternate gene names: NA
Gene position: 3985348-3984572 (Counterclockwise)
Preceding gene: 21244106
Following gene: 21244104
Centisome position: 77.0
GC content: 46.98
Gene sequence:
>777_bases GTGAAAGCATTATTTAGTGTAAAAAATTATTTAGGTGCAGCAATAGTTTTAAGTGCGTTTTCTGCATTTGGCGTTTTTGC ACAGACTGTTGTTTGCAGTAATGACGCTATACCTGCCGGATACGTTAAGACGGCTTTGACTAATCGGCCTGCTTGTAATA GCGGGCAAGGTTGGCAGATTGAGTTGCCGTATGAAAACCAACTTGTATGTAGAAGCTCTCCTGTGCCATCTCCGTATGTC GTGGTCCCTTTTGGTGATAACAACACAACCGCCTGCGGCGAGGTTAGGTTGCGGATCGGCAATGCTCGCGAAAATCTTCA AATATGTGCTGGATCGCCTATCCCCAGCGGCTATGTCATAACTAATATAGATTCAACTCCCCGGGGGTGCTTGGTTGGGC AGTACTACATAAGGCAAGCAACTAACGGCATATTGGCGTGCGGTAATAGCCCAGTGCCCCCGGGTTATGTCTTTACATGG AACGGCCAATCTTCCGTGTGCGGAAATACTTATGGACAACGCCGTTTCGAAATCGCTCGCAATGGCATGTTAGTTTGTGC CGATTCATCTATTCCTGACGGTTATGTAGTAACGCAAGCCTATGATAACAATGGGCAGACGTGTACTTTTGGTCAGCGTT ACATTCAACTCCCCACACAGGCAATCGCTGTTTGCCCAATTTCCCCAATTCCAGCAGGATGGCGTAGTAGTGGTTCGGTA AGCACGAATTCTTGCGGAAACAATTTTCCACAGGCATTGATCCTTACTCGCAACTAA
Upstream 100 bases:
>100_bases ACGCCGAAGGTGTTGCGTGTTGCTGGTGCTACTAAATAAATAGTCCTGAATTTTTGATGGGTAGTAACTTGATTCATATT TCATCAAAGAGGGAATTTTT
Downstream 100 bases:
>100_bases CTTTTTGCGACCGAGGCCGAAGTTGGCCTCGGTCTTTGTACGTGAAGCATGAAATCCATCTTAGACGTATTGCATTTGAG ATTTTGTATCCCGGACTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MKALFSVKNYLGAAIVLSAFSAFGVFAQTVVCSNDAIPAGYVKTALTNRPACNSGQGWQIELPYENQLVCRSSPVPSPYV VVPFGDNNTTACGEVRLRIGNARENLQICAGSPIPSGYVITNIDSTPRGCLVGQYYIRQATNGILACGNSPVPPGYVFTW NGQSSVCGNTYGQRRFEIARNGMLVCADSSIPDGYVVTQAYDNNGQTCTFGQRYIQLPTQAIAVCPISPIPAGWRSSGSV STNSCGNNFPQALILTRN
Sequences:
>Translated_258_residues MKALFSVKNYLGAAIVLSAFSAFGVFAQTVVCSNDAIPAGYVKTALTNRPACNSGQGWQIELPYENQLVCRSSPVPSPYV VVPFGDNNTTACGEVRLRIGNARENLQICAGSPIPSGYVITNIDSTPRGCLVGQYYIRQATNGILACGNSPVPPGYVFTW NGQSSVCGNTYGQRRFEIARNGMLVCADSSIPDGYVVTQAYDNNGQTCTFGQRYIQLPTQAIAVCPISPIPAGWRSSGSV STNSCGNNFPQALILTRN >Mature_258_residues MKALFSVKNYLGAAIVLSAFSAFGVFAQTVVCSNDAIPAGYVKTALTNRPACNSGQGWQIELPYENQLVCRSSPVPSPYV VVPFGDNNTTACGEVRLRIGNARENLQICAGSPIPSGYVITNIDSTPRGCLVGQYYIRQATNGILACGNSPVPPGYVFTW NGQSSVCGNTYGQRRFEIARNGMLVCADSSIPDGYVVTQAYDNNGQTCTFGQRYIQLPTQAIAVCPISPIPAGWRSSGSV STNSCGNNFPQALILTRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27486; Mature: 27486
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALFSVKNYLGAAIVLSAFSAFGVFAQTVVCSNDAIPAGYVKTALTNRPACNSGQGWQI CCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHCCCCCCCCCCCEEE ELPYENQLVCRSSPVPSPYVVVPFGDNNTTACGEVRLRIGNARENLQICAGSPIPSGYVI ECCCCCEEEECCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCEEEEECCCCCCCEEE TNIDSTPRGCLVGQYYIRQATNGILACGNSPVPPGYVFTWNGQSSVCGNTYGQRRFEIAR EECCCCCCCEEEHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCHHEEEEHH NGMLVCADSSIPDGYVVTQAYDNNGQTCTFGQRYIQLPTQAIAVCPISPIPAGWRSSGSV CCEEEEECCCCCCCEEEEEEECCCCCEEECCCCEEECCCCEEEEECCCCCCCCCCCCCCE STNSCGNNFPQALILTRN ECCCCCCCCCEEEEEECC >Mature Secondary Structure MKALFSVKNYLGAAIVLSAFSAFGVFAQTVVCSNDAIPAGYVKTALTNRPACNSGQGWQI CCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHCCCCCCCCCCCEEE ELPYENQLVCRSSPVPSPYVVVPFGDNNTTACGEVRLRIGNARENLQICAGSPIPSGYVI ECCCCCEEEECCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCEEEEECCCCCCCEEE TNIDSTPRGCLVGQYYIRQATNGILACGNSPVPPGYVFTWNGQSSVCGNTYGQRRFEIAR EECCCCCCCEEEHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCHHEEEEHH NGMLVCADSSIPDGYVVTQAYDNNGQTCTFGQRYIQLPTQAIAVCPISPIPAGWRSSGSV CCEEEEECCCCCCCEEEEEEECCCCCEEECCCCEEECCCCEEEEECCCCCCCCCCCCCCE STNSCGNNFPQALILTRN ECCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA