Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
---|---|
Accession | NC_003919 |
Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21244086
Identifier: 21244086
GI number: 21244086
Start: 3957651
End: 3958256
Strand: Reverse
Name: 21244086
Synonym: XAC3361
Alternate gene names: NA
Gene position: 3958256-3957651 (Counterclockwise)
Preceding gene: 21244087
Following gene: 21244077
Centisome position: 76.48
GC content: 67.0
Gene sequence:
>606_bases ATGCGCCCCACGCGGAGGGTTGCAATGAACCGCTGCCTGATCGGCAGCCTCGCCCTGATGCTGGCCATGAGTAGTTGCGC CACGCGCCAGCTCGCGGAACGGCAACGCAGCCAGCGCGAGGATTCGGTGGATCAACGCATGTTGCCTTCACAGCCGGACG GCGGCGCTACGGGTGTCCAACCCTACACACTGGCGCCGACGCAACGCTTTCGCATGCCACGCGCGGTGCGCAGCGAGGCC CCGGTGCTACCTGCCGATTCGCCGCGCCAGAGCCTGGCGCCCACCACCGTCTGCGCGCATCTCATTCTGAGCGCAGAGGG TACGGTGCAGCGCGTGGATCCGATGTCCGACCGCGACGAATGCGCCGCCGGGTTGCTGCCGGACAACGCCGACCTCATGC AAGCGGTGCGTACTACCGCGCTGCGATGGCAGTTCGTTCCAGCCACGATATGCACCTATGCACCAGGGGTTACCCAGCCG GCAGCACCGGACGACTGCACCGACGCCACCCAGATCGAGCCGGTACCGGTGACGCTGTCGTTCGCGTTCACCTTCGAGGT GCGGCAAGGCAGGGTGAGTGTGCGGACCGGGAAGGTGGTGCGATAG
Upstream 100 bases:
>100_bases CGGCACCGGCGGTTGCGGATATCCATTCCGGTACCGAAGCTGCTGCACGCCCACACGCTGCCGACCGGTCCGAACGTGTT GCCCGCTGTGCGCCTGCGGG
Downstream 100 bases:
>100_bases CTGCTGCAGCCGTTGCGCAGCGTGTCCCAGTCACAACCAACGCTGGGCCGTCTTGCAACGCGTCGACGCAAGCGCCCTAT CCACGCCCACACCACCGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MRPTRRVAMNRCLIGSLALMLAMSSCATRQLAERQRSQREDSVDQRMLPSQPDGGATGVQPYTLAPTQRFRMPRAVRSEA PVLPADSPRQSLAPTTVCAHLILSAEGTVQRVDPMSDRDECAAGLLPDNADLMQAVRTTALRWQFVPATICTYAPGVTQP AAPDDCTDATQIEPVPVTLSFAFTFEVRQGRVSVRTGKVVR
Sequences:
>Translated_201_residues MRPTRRVAMNRCLIGSLALMLAMSSCATRQLAERQRSQREDSVDQRMLPSQPDGGATGVQPYTLAPTQRFRMPRAVRSEA PVLPADSPRQSLAPTTVCAHLILSAEGTVQRVDPMSDRDECAAGLLPDNADLMQAVRTTALRWQFVPATICTYAPGVTQP AAPDDCTDATQIEPVPVTLSFAFTFEVRQGRVSVRTGKVVR >Mature_201_residues MRPTRRVAMNRCLIGSLALMLAMSSCATRQLAERQRSQREDSVDQRMLPSQPDGGATGVQPYTLAPTQRFRMPRAVRSEA PVLPADSPRQSLAPTTVCAHLILSAEGTVQRVDPMSDRDECAAGLLPDNADLMQAVRTTALRWQFVPATICTYAPGVTQP AAPDDCTDATQIEPVPVTLSFAFTFEVRQGRVSVRTGKVVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21910; Mature: 21910
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPTRRVAMNRCLIGSLALMLAMSSCATRQLAERQRSQREDSVDQRMLPSQPDGGATGVQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC PYTLAPTQRFRMPRAVRSEAPVLPADSPRQSLAPTTVCAHLILSAEGTVQRVDPMSDRDE CEEECCHHHHCCCHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCEECCCCCCHHH CAAGLLPDNADLMQAVRTTALRWQFVPATICTYAPGVTQPAAPDDCTDATQIEPVPVTLS HHHCCCCCCHHHHHHHHHHHHHEEECHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEE FAFTFEVRQGRVSVRTGKVVR EEEEEEEECCEEEECCCCCCC >Mature Secondary Structure MRPTRRVAMNRCLIGSLALMLAMSSCATRQLAERQRSQREDSVDQRMLPSQPDGGATGVQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC PYTLAPTQRFRMPRAVRSEAPVLPADSPRQSLAPTTVCAHLILSAEGTVQRVDPMSDRDE CEEECCHHHHCCCHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCEECCCCCCHHH CAAGLLPDNADLMQAVRTTALRWQFVPATICTYAPGVTQPAAPDDCTDATQIEPVPVTLS HHHCCCCCCHHHHHHHHHHHHHEEECHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEE FAFTFEVRQGRVSVRTGKVVR EEEEEEEECCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA