Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is fepA [C]
Identifier: 21243848
GI number: 21243848
Start: 3668968
End: 3671604
Strand: Direct
Name: fepA [C]
Synonym: XAC3121
Alternate gene names: 21243848
Gene position: 3668968-3671604 (Clockwise)
Preceding gene: 21243847
Following gene: 21243850
Centisome position: 70.89
GC content: 61.74
Gene sequence:
>2637_bases ATGAAATACAGCACCACCCTGCTGTCCAGCGCCATTGCACTATCGCTGGCATTCGCTGCGCAAGCCCAGGACAGCGCTGG TACGCAAGCCACCGACCTGGATGCCGTCCAGGTGGTCGGCATCCGCGCCAGCCTGGAAAAATCGCTCGATACCAAACGCA ACAACACCGGCATCTCCGAGGCGATCACCGCCGAAGACATCGGCAAATTCCCGAGCACCAACGTGGCCGAAGCGCTCTCG CAGATTCCCGGCGTGACGTTGGACAGACGCTTCGGGCAAGGCGAGCGCGTGAGTATCGACGGCACCGACCCCAGCCTCAA TCTGTCGTTTCTGGACGGGCATCCGGTCGCGCAGGCGATCTGGCTCTACGGCGAACAACCCAGCCGCGGTTTCGATTACA CCCTGCTGGCCCCGCAGATCCTGGGCCGTGCGGAAATCCTCAAATCCTCCGAAGCGCGCCTGACCGAAGGCAGCCTCGGT GGCACGGTGCTGATGCATACGCGGCAGCCACTGGATCTGAAAGTCAATGAAGTGGCTGCATCCATCGGCTACAGCTACAG CGACCAGGCCGGCCAGGGCAAACCCAACGCGGCACTGCTCTACAGCTGGAAGAACGCAGCCGAGACCTTCGGCATTGCGG TCTCGGCGCAGCATTACGAAGAACGCGTGGACCGCCGCGGCATGGAGGTCTTCGGCTACGTACCGGCCAGCACTTTCGCC AATGCCGCAGGCGGCGTGCCTGCCGATGCGGATGTGCCCAACTCGATCAACGCTGCCTGGTTCCAGCAGGATCGCGAGCG CGACAGCGCCGTGGTCAACCTGCAACTCAAGCCCAGTGAAGCGCTGGAGTTCAATCTGAGCGGCCTGTACATCAACGAGA ACTTCGACAACTACAACCAGTCGATGTACAGCTTTTTGACCTGGAATGCCGGCACGGTGGCGGCGGTGGACCAACTTGGC GGCGTCCGTAACGGTGTGGTCACCAGTGGCCACTCCAGCGCCAATGCCATCCCGCGCGGCGGTACGGTGATCTACGACAA CAACGTGCGCGAATCGGAGGTGACGACCAAAGGACTGGACCTGCGCGGCGCCTTCCGCGGCGAGGGTTGGGGCTTGAACG GACAGGTGGGCCAGAGCAAGTCCGAGAACAAAGATCTCTCGCAATACTTCATCGAGCCGTTCTACAACGGCGGCTTCAGC TGGGACACCCGCCGCGGCATCCGTTTCGACGATTCGGTAGCGGCACGTAACCCGGCCAATTGGGGTTCGGCCGGCGGCTG GTTCGGCAACAACGGCATCTTCTCTACCGAAAGCAAGGACACGTATGGCCAGCTGGATTTGAATCTGCAGTTCGACAGCG TGTTCAATCAATTGTTGCTGGGCGTGCGCCACGGCAAGCACGACGAGCGCTTCGAGCTCAATGTCTATGGCGGCGTCACC CCCGGCACCCTGGCCGATGTGGGCACGATCGGGCTCACCGATCTGCAGGGGTTCTATCCCGATCACGGCCGGCACATACA GGCAGGTCGCAACAACGTGCTTAACTGGATCCGCAACAGCCCAGTCGATTACAGCGCACCGGATCCGGCCAGCTACCTCA ACAACAGCTGGGCGCTGGAGCAGACCAACAACGCAGCCTATGCGCAGCTGAATTTTTCCAGTGGCGGTCTGCGCGGCAAT CTTGGCGTGCGCTACGTGGATTCCAAGACCGAAGGCAGCGGCTTCGTCTACAGCGGCACGCCCTCCCTCGCCGACGCCGG CAGCCTGTGGCAGACCCGCACCCGCAAGGAAGACTTTCTGCTGCCTTCGCTGACGCTGTCGTACGACACCAGCGACGACT GGGTATTCCGCTTCGCTGCGGCCAAGGTCATCGCCTGGGCACCGTACAACCAGATGGTCAATAACACCTTCCTCAACGAC ACCACGTTGACCGGCAGCGGCGGCAATGCAGACCTGTCTCCGTACGAATCCTGGAACTTCAATCTCTCTGCCGAATATTA TTTTGCGCAGCAAGCGGTGGGGGCGTGGTCGGTGTTCTACAAGAAGATCGACAACTACATCGACACCAGCGCCAGCGTGG AGCGCCAGTACAACGCATTGCGCGATACCGCACCGCAAAGCTGGGCGCAGTTGGTGGGCAGCAACGGCTGCACGGCCGAT GGCTATTGCGACTACAGCATTCAACGGCCGCGCAATGCCGGCGATGGCAAGGTCAAGGGCTTCAACATCTCCTTCCAGCA ACCGTTCGGCGACAGCGGCTTCGGCCTGACCGCCAACTACACCTATGCCGCTGGCGAAAACAACACCGGCGATGCCCTGC CCTACCAATCGCGCAACAGCCTCGCCTTCAGCCCCTACTACGAAAAAGGCCCGCTTAATGCGCGGCTGACCTACAACTGG CGCGACAGCTACCTGGCCGGCGGTTATGTGGCCGGTGCGGCACCGGCAAGCGTGGACGATTACGCCGAACTCGGCGCCAG CGTCGGCTATGCCTTCAGCCCGAACTGGTCGCTGCAGGTCGATGCGCAGAACCTGCTGGACGAGCAATACCTGCAGTATC TGGGTGACAAGGACCACCTGGCCGGTCGCTACAAGAGCGGACGCCGCTACATGGCCAGCCTGCACCTGAAGTTCTAG
Upstream 100 bases:
>100_bases GCGATACCACGCGTTCTATCCCGAGCGCGCGTCTGCAAGACCCCGCATCCGGCGAGCGGCAGCCCGCCGTCCATCCCTGT GCGTGATGAGGAGAGACATC
Downstream 100 bases:
>100_bases CGTAGCCAGCAACACGACTGCGCTCACCGCCGGGTGGGCGCGGCCGGTGCCCAGAATCGGCATCTACCACTTACACATGC CGGTTCCTGTGCGCCGTCCC
Product: TonB-dependent receptor
Products: NA
Alternate protein names: Nb-Dependent Receptor; NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor; Nb-Dependent Outer Membrane Receptor Protein; NB-Dependent Receptor Subfamily; NB-Dependent Outer Membrane Receptor Protein; Outer Membrane Insertion C-Terminal Signal; NB-Dependent Receptor Subfamily Protein; NB-Dependent Receptor-Like Protein; Nucleoside Diphosphate Kinase; Outer Membrane Protein; NB-Dependent Receptor Protein; 50S Ribosomal Protein L; NB-Dependent Outer Membrane Ferripyoverdine Receptor; NB-Dependent Receptor Plug Domain; NB Dependent Receptor-Related Protein; 3-Dehydroquinate Synthase; Outer Membrane Receptor Family Protein; 1-(5-Phosphoribosyl)-5-; Argininosuccinate Synthase; NB-Dependent Receptor Domain Protein
Number of amino acids: Translated: 878; Mature: 878
Protein sequence:
>878_residues MKYSTTLLSSAIALSLAFAAQAQDSAGTQATDLDAVQVVGIRASLEKSLDTKRNNTGISEAITAEDIGKFPSTNVAEALS QIPGVTLDRRFGQGERVSIDGTDPSLNLSFLDGHPVAQAIWLYGEQPSRGFDYTLLAPQILGRAEILKSSEARLTEGSLG GTVLMHTRQPLDLKVNEVAASIGYSYSDQAGQGKPNAALLYSWKNAAETFGIAVSAQHYEERVDRRGMEVFGYVPASTFA NAAGGVPADADVPNSINAAWFQQDRERDSAVVNLQLKPSEALEFNLSGLYINENFDNYNQSMYSFLTWNAGTVAAVDQLG GVRNGVVTSGHSSANAIPRGGTVIYDNNVRESEVTTKGLDLRGAFRGEGWGLNGQVGQSKSENKDLSQYFIEPFYNGGFS WDTRRGIRFDDSVAARNPANWGSAGGWFGNNGIFSTESKDTYGQLDLNLQFDSVFNQLLLGVRHGKHDERFELNVYGGVT PGTLADVGTIGLTDLQGFYPDHGRHIQAGRNNVLNWIRNSPVDYSAPDPASYLNNSWALEQTNNAAYAQLNFSSGGLRGN LGVRYVDSKTEGSGFVYSGTPSLADAGSLWQTRTRKEDFLLPSLTLSYDTSDDWVFRFAAAKVIAWAPYNQMVNNTFLND TTLTGSGGNADLSPYESWNFNLSAEYYFAQQAVGAWSVFYKKIDNYIDTSASVERQYNALRDTAPQSWAQLVGSNGCTAD GYCDYSIQRPRNAGDGKVKGFNISFQQPFGDSGFGLTANYTYAAGENNTGDALPYQSRNSLAFSPYYEKGPLNARLTYNW RDSYLAGGYVAGAAPASVDDYAELGASVGYAFSPNWSLQVDAQNLLDEQYLQYLGDKDHLAGRYKSGRRYMASLHLKF
Sequences:
>Translated_878_residues MKYSTTLLSSAIALSLAFAAQAQDSAGTQATDLDAVQVVGIRASLEKSLDTKRNNTGISEAITAEDIGKFPSTNVAEALS QIPGVTLDRRFGQGERVSIDGTDPSLNLSFLDGHPVAQAIWLYGEQPSRGFDYTLLAPQILGRAEILKSSEARLTEGSLG GTVLMHTRQPLDLKVNEVAASIGYSYSDQAGQGKPNAALLYSWKNAAETFGIAVSAQHYEERVDRRGMEVFGYVPASTFA NAAGGVPADADVPNSINAAWFQQDRERDSAVVNLQLKPSEALEFNLSGLYINENFDNYNQSMYSFLTWNAGTVAAVDQLG GVRNGVVTSGHSSANAIPRGGTVIYDNNVRESEVTTKGLDLRGAFRGEGWGLNGQVGQSKSENKDLSQYFIEPFYNGGFS WDTRRGIRFDDSVAARNPANWGSAGGWFGNNGIFSTESKDTYGQLDLNLQFDSVFNQLLLGVRHGKHDERFELNVYGGVT PGTLADVGTIGLTDLQGFYPDHGRHIQAGRNNVLNWIRNSPVDYSAPDPASYLNNSWALEQTNNAAYAQLNFSSGGLRGN LGVRYVDSKTEGSGFVYSGTPSLADAGSLWQTRTRKEDFLLPSLTLSYDTSDDWVFRFAAAKVIAWAPYNQMVNNTFLND TTLTGSGGNADLSPYESWNFNLSAEYYFAQQAVGAWSVFYKKIDNYIDTSASVERQYNALRDTAPQSWAQLVGSNGCTAD GYCDYSIQRPRNAGDGKVKGFNISFQQPFGDSGFGLTANYTYAAGENNTGDALPYQSRNSLAFSPYYEKGPLNARLTYNW RDSYLAGGYVAGAAPASVDDYAELGASVGYAFSPNWSLQVDAQNLLDEQYLQYLGDKDHLAGRYKSGRRYMASLHLKF >Mature_878_residues MKYSTTLLSSAIALSLAFAAQAQDSAGTQATDLDAVQVVGIRASLEKSLDTKRNNTGISEAITAEDIGKFPSTNVAEALS QIPGVTLDRRFGQGERVSIDGTDPSLNLSFLDGHPVAQAIWLYGEQPSRGFDYTLLAPQILGRAEILKSSEARLTEGSLG GTVLMHTRQPLDLKVNEVAASIGYSYSDQAGQGKPNAALLYSWKNAAETFGIAVSAQHYEERVDRRGMEVFGYVPASTFA NAAGGVPADADVPNSINAAWFQQDRERDSAVVNLQLKPSEALEFNLSGLYINENFDNYNQSMYSFLTWNAGTVAAVDQLG GVRNGVVTSGHSSANAIPRGGTVIYDNNVRESEVTTKGLDLRGAFRGEGWGLNGQVGQSKSENKDLSQYFIEPFYNGGFS WDTRRGIRFDDSVAARNPANWGSAGGWFGNNGIFSTESKDTYGQLDLNLQFDSVFNQLLLGVRHGKHDERFELNVYGGVT PGTLADVGTIGLTDLQGFYPDHGRHIQAGRNNVLNWIRNSPVDYSAPDPASYLNNSWALEQTNNAAYAQLNFSSGGLRGN LGVRYVDSKTEGSGFVYSGTPSLADAGSLWQTRTRKEDFLLPSLTLSYDTSDDWVFRFAAAKVIAWAPYNQMVNNTFLND TTLTGSGGNADLSPYESWNFNLSAEYYFAQQAVGAWSVFYKKIDNYIDTSASVERQYNALRDTAPQSWAQLVGSNGCTAD GYCDYSIQRPRNAGDGKVKGFNISFQQPFGDSGFGLTANYTYAAGENNTGDALPYQSRNSLAFSPYYEKGPLNARLTYNW RDSYLAGGYVAGAAPASVDDYAELGASVGYAFSPNWSLQVDAQNLLDEQYLQYLGDKDHLAGRYKSGRRYMASLHLKF
Specific function: This Protein Is Involved In The Initial Step Of Iron Uptake By Binding Ferrienterobactin (Fe-Ent), An Iron Chelatin Siderophore That Allows E.Coli To Extract Iron From The Environment. Fepa Also Acts As A Receptor For Colicins B And D. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Outer Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 95616; Mature: 95616
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYSTTLLSSAIALSLAFAAQAQDSAGTQATDLDAVQVVGIRASLEKSLDTKRNNTGISE CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCCHH AITAEDIGKFPSTNVAEALSQIPGVTLDRRFGQGERVSIDGTDPSLNLSFLDGHPVAQAI HHHHHHHCCCCCCHHHHHHHHCCCCEEECCCCCCCEEEECCCCCCEEEEEECCCCCEEEE WLYGEQPSRGFDYTLLAPQILGRAEILKSSEARLTEGSLGGTVLMHTRQPLDLKVNEVAA EEECCCCCCCCCEEEECHHHHCHHHHHCCCCCEECCCCCCCEEEEECCCCCCEEHHHHHH SIGYSYSDQAGQGKPNAALLYSWKNAAETFGIAVSAQHYEERVDRRGMEVFGYVPASTFA HHCCCCCCCCCCCCCCEEEEEEECCCCHHHEEEEEHHHHHHHHHHCCCEEEEECCHHHHH NAAGGVPADADVPNSINAAWFQQDRERDSAVVNLQLKPSEALEFNLSGLYINENFDNYNQ HCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEEEEECCCCCHHH SMYSFLTWNAGTVAAVDQLGGVRNGVVTSGHSSANAIPRGGTVIYDNNVRESEVTTKGLD HHHHEEECCCCCHHHHHHHCCCCCCEEECCCCCCCCCCCCCEEEECCCCCCCCCEECCCC LRGAFRGEGWGLNGQVGQSKSENKDLSQYFIEPFYNGGFSWDTRRGIRFDDSVAARNPAN EEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC WGSAGGWFGNNGIFSTESKDTYGQLDLNLQFDSVFNQLLLGVRHGKHDERFELNVYGGVT CCCCCCCCCCCCEECCCCCCCCEEEEEEEEHHHHHHHHHHHHHCCCCCCEEEEEEECCCC PGTLADVGTIGLTDLQGFYPDHGRHIQAGRNNVLNWIRNSPVDYSAPDPASYLNNSWALE CCHHHHCCCCCCHHCCCCCCCCCCEECCCHHHHHHHHHCCCCCCCCCCCHHHHCCCEEEE QTNNAAYAQLNFSSGGLRGNLGVRYVDSKTEGSGFVYSGTPSLADAGSLWQTRTRKEDFL ECCCEEEEEEECCCCCEECCCCEEEECCCCCCCCEEEECCCCCCCCCCHHHHHCCCCCEE LPSLTLSYDTSDDWVFRFAAAKVIAWAPYNQMVNNTFLNDTTLTGSGGNADLSPYESWNF CCEEEEEECCCCCCEEEEEHHHEEEECCHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCC NLSAEYYFAQQAVGAWSVFYKKIDNYIDTSASVERQYNALRDTAPQSWAQLVGSNGCTAD CEEEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCC GYCDYSIQRPRNAGDGKVKGFNISFQQPFGDSGFGLTANYTYAAGENNTGDALPYQSRNS CEECCEECCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCC LAFSPYYEKGPLNARLTYNWRDSYLAGGYVAGAAPASVDDYAELGASVGYAFSPNWSLQV EEECCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCHHHHHHHHHCCEEECCCCEEEE DAQNLLDEQYLQYLGDKDHLAGRYKSGRRYMASLHLKF CHHHHHHHHHHHHCCCCHHHCCHHHCCCEEEEEEEECC >Mature Secondary Structure MKYSTTLLSSAIALSLAFAAQAQDSAGTQATDLDAVQVVGIRASLEKSLDTKRNNTGISE CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCCHH AITAEDIGKFPSTNVAEALSQIPGVTLDRRFGQGERVSIDGTDPSLNLSFLDGHPVAQAI HHHHHHHCCCCCCHHHHHHHHCCCCEEECCCCCCCEEEECCCCCCEEEEEECCCCCEEEE WLYGEQPSRGFDYTLLAPQILGRAEILKSSEARLTEGSLGGTVLMHTRQPLDLKVNEVAA EEECCCCCCCCCEEEECHHHHCHHHHHCCCCCEECCCCCCCEEEEECCCCCCEEHHHHHH SIGYSYSDQAGQGKPNAALLYSWKNAAETFGIAVSAQHYEERVDRRGMEVFGYVPASTFA HHCCCCCCCCCCCCCCEEEEEEECCCCHHHEEEEEHHHHHHHHHHCCCEEEEECCHHHHH NAAGGVPADADVPNSINAAWFQQDRERDSAVVNLQLKPSEALEFNLSGLYINENFDNYNQ HCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEEEEECCCCCHHH SMYSFLTWNAGTVAAVDQLGGVRNGVVTSGHSSANAIPRGGTVIYDNNVRESEVTTKGLD HHHHEEECCCCCHHHHHHHCCCCCCEEECCCCCCCCCCCCCEEEECCCCCCCCCEECCCC LRGAFRGEGWGLNGQVGQSKSENKDLSQYFIEPFYNGGFSWDTRRGIRFDDSVAARNPAN EEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC WGSAGGWFGNNGIFSTESKDTYGQLDLNLQFDSVFNQLLLGVRHGKHDERFELNVYGGVT CCCCCCCCCCCCEECCCCCCCCEEEEEEEEHHHHHHHHHHHHHCCCCCCEEEEEEECCCC PGTLADVGTIGLTDLQGFYPDHGRHIQAGRNNVLNWIRNSPVDYSAPDPASYLNNSWALE CCHHHHCCCCCCHHCCCCCCCCCCEECCCHHHHHHHHHCCCCCCCCCCCHHHHCCCEEEE QTNNAAYAQLNFSSGGLRGNLGVRYVDSKTEGSGFVYSGTPSLADAGSLWQTRTRKEDFL ECCCEEEEEEECCCCCEECCCCEEEECCCCCCCCEEEECCCCCCCCCCHHHHHCCCCCEE LPSLTLSYDTSDDWVFRFAAAKVIAWAPYNQMVNNTFLNDTTLTGSGGNADLSPYESWNF CCEEEEEECCCCCCEEEEEHHHEEEECCHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCC NLSAEYYFAQQAVGAWSVFYKKIDNYIDTSASVERQYNALRDTAPQSWAQLVGSNGCTAD CEEEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCC GYCDYSIQRPRNAGDGKVKGFNISFQQPFGDSGFGLTANYTYAAGENNTGDALPYQSRNS CEECCEECCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCC LAFSPYYEKGPLNARLTYNWRDSYLAGGYVAGAAPASVDDYAELGASVGYAFSPNWSLQV EEECCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCHHHHHHHHHCCEEECCCCEEEE DAQNLLDEQYLQYLGDKDHLAGRYKSGRRYMASLHLKF CHHHHHHHHHHHHCCCCHHHCCHHHCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA