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The map label for this gene is scpB [H]

Identifier: 21243052

GI number: 21243052

Start: 2710739

End: 2711977

Strand: Direct

Name: scpB [H]

Synonym: XAC2317

Alternate gene names: 21243052

Gene position: 2710739-2711977 (Clockwise)

Preceding gene: 77748646

Following gene: 21243053

Centisome position: 52.38

GC content: 67.15

Gene sequence:

>1239_bases
ATGCCGCCAACGAACCTATCTGAAGCCGATCATCGAATGGATCAAGCGCTGATCACCCGCATTATCGAAGCCGCCCTGCT
GGCCAGCAGCCAGCCGCTGACGCTGGCGCAGCTGCTGGGGCTGTTTCCGGAAGACGAGCCGGCGCCGCCCGGCAGCGTGG
AGCGCGCACTGGAACTGCTGCGCGAGGCCTGTGCCGACCGTGGCGTGGAACTGGTCGAGGTGGCCTCCGGCTTCCGCTTC
CAGGTCAAGGCCGACGTGCATGGCTGGGTTGCCCGGCTGTGGACCGAGCGCCGCACCAAGTACACCCGCGCCACGCTGGA
GACCCTGGCGCTGATCGCCTACCGCCAGCCGATCACCCGCGGCGAGATCGAGCAGGTGCGCGGCGTGGCAGTGAGCAGCA
ACATCATCCAGGCGCTGGAAGAGCGCGAATGGATCCGCGTGGTGGGCCACCGCGACGTGCCCGGCAAGCCGGCCCTGTTC
GGCACCACCAAGGGCTTTCTGGATTACTTCGGCCTCAAGCGATTGGACGAGCTGCCGCCATTGTCTGAGTTGAAGGACAT
CGCCGAGCTGGAACCGCAGCTGCCGCTGGACCGCGACGGGCAATTGGATGGCGCAGTGCCGGCCTCGGCAGCGATGGACG
CGGCGCAGGATCGGGCGGATGCCGGTGACGCTGAAGGCGGCGATTCGGATGCAGCGGCTGACGCTGCTGGTAATGCGGAC
GCGGAAGCAGAAACCGACGCTGGCGCCGAGCCCGACGACAGCATCGGCGGCTCCGGCGGTTGGCAAGATGCCACGGATGC
GGACGAGGCCGACACCTCGGCGACTCCGTCCCGCAACACCGATGCGCCGAGCGACCGCCAGACCAGCGCCGAACGCAATC
CTGAAAGTGAAGCCGACAACGATGCCGATGCCGACCAGCATGCGCAGGAACCGGTCGGCGATGCCGGAATCGACCAGCAA
GACCCCGATCTCGACCAAGCAATCGATACGCACGCGACCGACGCAGTAAACGACCAGACACCGCAACACCCCGAGCATGG
CTCGGTGCACGAGAAGAACACGCAGGACCCAGACGACGCCCGTGAGGGCGACCCCGACACCGCGCCGGGAACGCGCGCGG
ATGCAGTGAACGAAGACGAAGACAACGCCGTCGCGACGACGACCGTGGCTGTTGACGAAGCCGATTCCGACCCAGAGGCC
GACCCGCAACGCGGCGGCCGGAGCCAGACACATGAGTGA

Upstream 100 bases:

>100_bases
ATCGTGCAGGAAGCGCCGCTGGCGCCGATCTACGTGAAGTCGCTGGCGTTGGGCAATACCAATGCGCCGTTGCAATTCTC
CAGCGAATTCGACGACAGCG

Downstream 100 bases:

>100_bases
CACCCCCCGCAAGCTGTCGTTGAACAAGCTTTCCCTCAAGCGCGACAGCGCGCCCGAAGCGCCCAAGCTGGAAGAGCGCC
TGCACAAGGTGCTGGCCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MPPTNLSEADHRMDQALITRIIEAALLASSQPLTLAQLLGLFPEDEPAPPGSVERALELLREACADRGVELVEVASGFRF
QVKADVHGWVARLWTERRTKYTRATLETLALIAYRQPITRGEIEQVRGVAVSSNIIQALEEREWIRVVGHRDVPGKPALF
GTTKGFLDYFGLKRLDELPPLSELKDIAELEPQLPLDRDGQLDGAVPASAAMDAAQDRADAGDAEGGDSDAAADAAGNAD
AEAETDAGAEPDDSIGGSGGWQDATDADEADTSATPSRNTDAPSDRQTSAERNPESEADNDADADQHAQEPVGDAGIDQQ
DPDLDQAIDTHATDAVNDQTPQHPEHGSVHEKNTQDPDDAREGDPDTAPGTRADAVNEDEDNAVATTTVAVDEADSDPEA
DPQRGGRSQTHE

Sequences:

>Translated_412_residues
MPPTNLSEADHRMDQALITRIIEAALLASSQPLTLAQLLGLFPEDEPAPPGSVERALELLREACADRGVELVEVASGFRF
QVKADVHGWVARLWTERRTKYTRATLETLALIAYRQPITRGEIEQVRGVAVSSNIIQALEEREWIRVVGHRDVPGKPALF
GTTKGFLDYFGLKRLDELPPLSELKDIAELEPQLPLDRDGQLDGAVPASAAMDAAQDRADAGDAEGGDSDAAADAAGNAD
AEAETDAGAEPDDSIGGSGGWQDATDADEADTSATPSRNTDAPSDRQTSAERNPESEADNDADADQHAQEPVGDAGIDQQ
DPDLDQAIDTHATDAVNDQTPQHPEHGSVHEKNTQDPDDAREGDPDTAPGTRADAVNEDEDNAVATTTVAVDEADSDPEA
DPQRGGRSQTHE
>Mature_411_residues
PPTNLSEADHRMDQALITRIIEAALLASSQPLTLAQLLGLFPEDEPAPPGSVERALELLREACADRGVELVEVASGFRFQ
VKADVHGWVARLWTERRTKYTRATLETLALIAYRQPITRGEIEQVRGVAVSSNIIQALEEREWIRVVGHRDVPGKPALFG
TTKGFLDYFGLKRLDELPPLSELKDIAELEPQLPLDRDGQLDGAVPASAAMDAAQDRADAGDAEGGDSDAAADAAGNADA
EAETDAGAEPDDSIGGSGGWQDATDADEADTSATPSRNTDAPSDRQTSAERNPESEADNDADADQHAQEPVGDAGIDQQD
PDLDQAIDTHATDAVNDQTPQHPEHGSVHEKNTQDPDDAREGDPDTAPGTRADAVNEDEDNAVATTTVAVDEADSDPEAD
PQRGGRSQTHE

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 43918; Mature: 43787

Theoretical pI: Translated: 3.93; Mature: 3.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPTNLSEADHRMDQALITRIIEAALLASSQPLTLAQLLGLFPEDEPAPPGSVERALELL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHH
REACADRGVELVEVASGFRFQVKADVHGWVARLWTERRTKYTRATLETLALIAYRQPITR
HHHHHHCCCCHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GEIEQVRGVAVSSNIIQALEEREWIRVVGHRDVPGKPALFGTTKGFLDYFGLKRLDELPP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
LSELKDIAELEPQLPLDRDGQLDGAVPASAAMDAAQDRADAGDAEGGDSDAAADAAGNAD
HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCC
AEAETDAGAEPDDSIGGSGGWQDATDADEADTSATPSRNTDAPSDRQTSAERNPESEADN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC
DADADQHAQEPVGDAGIDQQDPDLDQAIDTHATDAVNDQTPQHPEHGSVHEKNTQDPDDA
CCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH
REGDPDTAPGTRADAVNEDEDNAVATTTVAVDEADSDPEADPQRGGRSQTHE
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHCCCCCCCCC
>Mature Secondary Structure 
PPTNLSEADHRMDQALITRIIEAALLASSQPLTLAQLLGLFPEDEPAPPGSVERALELL
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHH
REACADRGVELVEVASGFRFQVKADVHGWVARLWTERRTKYTRATLETLALIAYRQPITR
HHHHHHCCCCHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GEIEQVRGVAVSSNIIQALEEREWIRVVGHRDVPGKPALFGTTKGFLDYFGLKRLDELPP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
LSELKDIAELEPQLPLDRDGQLDGAVPASAAMDAAQDRADAGDAEGGDSDAAADAAGNAD
HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCC
AEAETDAGAEPDDSIGGSGGWQDATDADEADTSATPSRNTDAPSDRQTSAERNPESEADN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC
DADADQHAQEPVGDAGIDQQDPDLDQAIDTHATDAVNDQTPQHPEHGSVHEKNTQDPDDA
CCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH
REGDPDTAPGTRADAVNEDEDNAVATTTVAVDEADSDPEADPQRGGRSQTHE
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]