Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is hisC [H]
Identifier: 21242376
GI number: 21242376
Start: 1871684
End: 1872808
Strand: Reverse
Name: hisC [H]
Synonym: XAC1626
Alternate gene names: 21242376
Gene position: 1872808-1871684 (Counterclockwise)
Preceding gene: 77748597
Following gene: 21242368
Centisome position: 36.19
GC content: 69.87
Gene sequence:
>1125_bases GTGTCGTTGCCCGTCTCGCGCCGTTCGTTTCTCAGCCTCGCTACCACCGGCGTGGCGGTTTCCGCACTGGGGCTGGCACC CGCAGCCCAGGCGGCCCGCAAGCGCGCCGCGGCCCCGGCAACGCCGGGCGTGGCCGCGGCGGCCGGCACGGTCTACCTCA ACCTCAACGAGCATCCGCTCGGGCCCGCCCCGGCAGCGATTGAAGCTGCCACACGTTCGCTGGCACGCTCGGGCCGCTAC CTGCTCGAGATGGAGCACGATCTGCGCAACCTGATGACCGGCGAGCTGCAGTTGCCCAACGATCATCTATCGCTGTTCCC CGGCTCGCGTGACGCGCTGAACCGGGCCGGCAGCCTGTTGACGTCCGCGCGCGCGGGGCTGGTGGTCGCCGACCCCAGCT TCGACCCGCTGATCGAAAGCGCCACCGCCCGCGGCGTGGCCGTACGCAAGGTGCCGCTGCGTGCCGATGGCGCGCACGAC GTCAAGGCGATGGCCAAGGCCGACCCGACTGCCGGCATGCTGTATCTGTGCAACCCCGGCAACGCCACTGGCGCCATCAC CCCACGCGCCGACATCGAATGGTTGCTGGCCAACAAGCCGGCCAGCGCCGTGCTGGTGGTCGACGAGGCGTACATCCACT ACAGCAACGAGCCCTCGGTGGCCGATCTGGTGCGTCAGCGCCAGGATCTGATCGTGCTGCGCAGCTTCTCCAAGCTCTAC GGCATGGCTGGCCTGCGCCTGGGTGCCGCCCTGGCCCCGCCCGGCCTGCAGACCAAGCTTGCCGCATTCGGCAGCAACCC GTCGTCGGTTCCGGCGATGGCCGCCGGCATCGCCAGCCTGCGCGACCCGCTGCTGGTGCAGACCCGCCGCGCCGAGAACG CCCGCGTGCGCGAGGAGACCATCGCCTGGCTCAAGGGCAAGGGCTACACCTGCCTGCCCTCGCAAGCCAACTGCTTCCTG CTGGACGTCAAGCGCGATGCAAGCGTGTTCGCCGATTCGATGCAGAAGCAGGGCGTCATCGTCGGCCGCAGCTGGCCGAT CTGGCCCAAGCGGGTGCGCGTCAGCGTGGGGACCGAGGCGGAAATGCTGCGGTTCCGTGAGGCGTTCGGGAAGGCCAAGC GCTAA
Upstream 100 bases:
>100_bases GCACGCGTCCAACCAGTTTTATGGCAATTCCCCGATAGGCAGACAGACACAAACCGGCTAGCGTGGCGCCCTCTTTGCCC GCCGCCTATGGAGTTCGCCC
Downstream 100 bases:
>100_bases CCCTTTTCCCCTTGGGACGTTGCCTCCTTTATGGGGGGAGAAAGTGCCCCGTAGGGGCGGATGAGGGTGCGGGCGAAGCC TGAGGTTGTTCAACTGCACG
Product: aminotransferase
Products: 3-(imidazol-4-yl)-2-oxopropyl phosphate; L-glutamate
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MSLPVSRRSFLSLATTGVAVSALGLAPAAQAARKRAAAPATPGVAAAAGTVYLNLNEHPLGPAPAAIEAATRSLARSGRY LLEMEHDLRNLMTGELQLPNDHLSLFPGSRDALNRAGSLLTSARAGLVVADPSFDPLIESATARGVAVRKVPLRADGAHD VKAMAKADPTAGMLYLCNPGNATGAITPRADIEWLLANKPASAVLVVDEAYIHYSNEPSVADLVRQRQDLIVLRSFSKLY GMAGLRLGAALAPPGLQTKLAAFGSNPSSVPAMAAGIASLRDPLLVQTRRAENARVREETIAWLKGKGYTCLPSQANCFL LDVKRDASVFADSMQKQGVIVGRSWPIWPKRVRVSVGTEAEMLRFREAFGKAKR
Sequences:
>Translated_374_residues MSLPVSRRSFLSLATTGVAVSALGLAPAAQAARKRAAAPATPGVAAAAGTVYLNLNEHPLGPAPAAIEAATRSLARSGRY LLEMEHDLRNLMTGELQLPNDHLSLFPGSRDALNRAGSLLTSARAGLVVADPSFDPLIESATARGVAVRKVPLRADGAHD VKAMAKADPTAGMLYLCNPGNATGAITPRADIEWLLANKPASAVLVVDEAYIHYSNEPSVADLVRQRQDLIVLRSFSKLY GMAGLRLGAALAPPGLQTKLAAFGSNPSSVPAMAAGIASLRDPLLVQTRRAENARVREETIAWLKGKGYTCLPSQANCFL LDVKRDASVFADSMQKQGVIVGRSWPIWPKRVRVSVGTEAEMLRFREAFGKAKR >Mature_373_residues SLPVSRRSFLSLATTGVAVSALGLAPAAQAARKRAAAPATPGVAAAAGTVYLNLNEHPLGPAPAAIEAATRSLARSGRYL LEMEHDLRNLMTGELQLPNDHLSLFPGSRDALNRAGSLLTSARAGLVVADPSFDPLIESATARGVAVRKVPLRADGAHDV KAMAKADPTAGMLYLCNPGNATGAITPRADIEWLLANKPASAVLVVDEAYIHYSNEPSVADLVRQRQDLIVLRSFSKLYG MAGLRLGAALAPPGLQTKLAAFGSNPSSVPAMAAGIASLRDPLLVQTRRAENARVREETIAWLKGKGYTCLPSQANCFLL DVKRDASVFADSMQKQGVIVGRSWPIWPKRVRVSVGTEAEMLRFREAFGKAKR
Specific function: May catalyze the transamination reaction in phenylalanine biosynthesis [H]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=253, Percent_Identity=28.0632411067194, Blast_Score=79, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6322075, Length=276, Percent_Identity=28.2608695652174, Blast_Score=68, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001176 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: 2.6.1.9
Molecular weight: Translated: 39658; Mature: 39527
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: PS00105 AA_TRANSFER_CLASS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPVSRRSFLSLATTGVAVSALGLAPAAQAARKRAAAPATPGVAAAAGTVYLNLNEHPL CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEECCEEEEEECCCCC GPAPAAIEAATRSLARSGRYLLEMEHDLRNLMTGELQLPNDHLSLFPGSRDALNRAGSLL CCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHCCCCEECCCCCEEECCCCHHHHHHHHHHH TSARAGLVVADPSFDPLIESATARGVAVRKVPLRADGAHDVKAMAKADPTAGMLYLCNPG HHCCCCEEEECCCCCHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCEEEEECCC NATGAITPRADIEWLLANKPASAVLVVDEAYIHYSNEPSVADLVRQRQDLIVLRSFSKLY CCCCEECCCCCEEEEEECCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH GMAGLRLGAALAPPGLQTKLAAFGSNPSSVPAMAAGIASLRDPLLVQTRRAENARVREET HHHHHHHCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHH IAWLKGKGYTCLPSQANCFLLDVKRDASVFADSMQKQGVIVGRSWPIWPKRVRVSVGTEA HHHCCCCCCEECCCCCCEEEEEECCCHHHHHHHHHHCCEEEECCCCCCCCEEEEEECCHH EMLRFREAFGKAKR HHHHHHHHHCCCCC >Mature Secondary Structure SLPVSRRSFLSLATTGVAVSALGLAPAAQAARKRAAAPATPGVAAAAGTVYLNLNEHPL CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEECCEEEEEECCCCC GPAPAAIEAATRSLARSGRYLLEMEHDLRNLMTGELQLPNDHLSLFPGSRDALNRAGSLL CCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHCCCCEECCCCCEEECCCCHHHHHHHHHHH TSARAGLVVADPSFDPLIESATARGVAVRKVPLRADGAHDVKAMAKADPTAGMLYLCNPG HHCCCCEEEECCCCCHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCEEEEECCC NATGAITPRADIEWLLANKPASAVLVVDEAYIHYSNEPSVADLVRQRQDLIVLRSFSKLY CCCCEECCCCCEEEEEECCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH GMAGLRLGAALAPPGLQTKLAAFGSNPSSVPAMAAGIASLRDPLLVQTRRAENARVREET HHHHHHHCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHH IAWLKGKGYTCLPSQANCFLLDVKRDASVFADSMQKQGVIVGRSWPIWPKRVRVSVGTEA HHHCCCCCCEECCCCCCEEEEEECCCHHHHHHHHHHCCEEEECCCCCCCCEEEEEECCHH EMLRFREAFGKAKR HHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: Pyridoxal Phosphate. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-histidinol phosphate; 2-oxoglutarate
Specific reaction: L-histidinol phosphate + 2-oxoglutarate = 3-(imidazol-4-yl)-2-oxopropyl phosphate + L-glutamate
General reaction: Amino group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA