BacMap

Definition	Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession	NC_003919
Length	5,175,554

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The map label for this gene is crt [H]

Identifier: 21242334

GI number: 21242334

Start: 1830456

End: 1831238

Strand: Reverse

Name: crt [H]

Synonym: XAC1584

Alternate gene names: 21242334

Gene position: 1831238-1830456 (Counterclockwise)

Preceding gene: 21242339

Following gene: 21242333

Centisome position: 35.38

GC content: 65.13

Gene sequence:

>783_bases
ATGTCCAATCACGTCATTCTGATCGCCGATCACGCCAGCGTCCGGACGATTACGGTCAACCGGCCGGACAAACTGAACGC
TTTGAACCAGGCGACCATGCAGGCGCTGGATCAGGCGTTCCAAGACGCAGCCGCTGCGGACGATGTACGCGCCGTGATTC
TCACCGGCGCCGGCCCCAAGGCCTTCGTGGCGGGTGCGGATATCGCGGAAATGAGTGATCTGTCGGCAATCCAGGGCCGC
GCATTCTCGCTGCTGGGCCAGCGGCTGATGCGCCGGATCGAACGCATGCCCAAGCCGGTGATCGCGATGATCAATGGCTT
CGCGCTGGGGGGCGGCCTGGAGCTGGCGATGGCGTGCCACCTGCGCATCGCCGCAGCAACAGCGCGCCTGGGGCAACCGG
AAATCAATCTCGGCCTGATCCCTGGCTTTGGCGGCACGCAGCGCCTGCTGCGTCTGACCGGCCGCGCCGCAGCGCTGGAA
CTGTGCCTGCTCGGCCTGCCGATCGACGCAGCCCGCGCACTGCAACTGGGCCTGGTCAATCGCGTGGTCGAAGCGGATGC
CTTGCACGAAGAGACGCTGGCGCTCGCGCAACGCCTGGCAAACGCGGCGCCGCTGGCGCTGCGCGGCATTCTCGATGCGG
TGATGTTCGGCGGCGAATGCGCCATCGAAGAAGGCCTGCAGCTGGAAGCCGCGCAATTTGCGTTGTTATTCGCCACTGAC
GATATGCGCGAAGGCACTCGCGCGTTTCTCGACAAACGCCCTGCACAGTTCCGCAATCGTTGA

Upstream 100 bases:

>100_bases
ACGGCCGCGATACCGAACCGCTACTTATCGCGAAAGCTAGGACCAGCAAGGCTTTCGGAAGTTCCGTATTTACTATTTTT
TTACGTTCGCAAGGGTTCAC

Downstream 100 bases:

>100_bases
TATCGCCATGACGCTCGACCTCATTCCGGAATCGCGTCCATGGCCGCTGCTGTTGTTCGATTGTGTGCAGGCCGACGACC
TGGATCGTGCGCTGGCACTC

Product: 3-hydroxybutyryl-CoA dehydratase

Products: NA

Alternate protein names: Crotonase [H]

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MSNHVILIADHASVRTITVNRPDKLNALNQATMQALDQAFQDAAAADDVRAVILTGAGPKAFVAGADIAEMSDLSAIQGR
AFSLLGQRLMRRIERMPKPVIAMINGFALGGGLELAMACHLRIAAATARLGQPEINLGLIPGFGGTQRLLRLTGRAAALE
LCLLGLPIDAARALQLGLVNRVVEADALHEETLALAQRLANAAPLALRGILDAVMFGGECAIEEGLQLEAAQFALLFATD
DMREGTRAFLDKRPAQFRNR

Sequences:

>Translated_260_residues
MSNHVILIADHASVRTITVNRPDKLNALNQATMQALDQAFQDAAAADDVRAVILTGAGPKAFVAGADIAEMSDLSAIQGR
AFSLLGQRLMRRIERMPKPVIAMINGFALGGGLELAMACHLRIAAATARLGQPEINLGLIPGFGGTQRLLRLTGRAAALE
LCLLGLPIDAARALQLGLVNRVVEADALHEETLALAQRLANAAPLALRGILDAVMFGGECAIEEGLQLEAAQFALLFATD
DMREGTRAFLDKRPAQFRNR
>Mature_259_residues
SNHVILIADHASVRTITVNRPDKLNALNQATMQALDQAFQDAAAADDVRAVILTGAGPKAFVAGADIAEMSDLSAIQGRA
FSLLGQRLMRRIERMPKPVIAMINGFALGGGLELAMACHLRIAAATARLGQPEINLGLIPGFGGTQRLLRLTGRAAALEL
CLLGLPIDAARALQLGLVNRVVEADALHEETLALAQRLANAAPLALRGILDAVMFGGECAIEEGLQLEAAQFALLFATDD
MREGTRAFLDKRPAQFRNR

Specific function: Could Possibly Oxidizes Fatty Acids Using Specific Components (By Similarity). [C]

COG id: COG1024

COG function: function code I; Enoyl-CoA hydratase/carnithine racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]

Homologues:

Organism=Homo sapiens, GI194097323, Length=263, Percent_Identity=39.5437262357414, Blast_Score=174, Evalue=7e-44,
Organism=Homo sapiens, GI20127408, Length=175, Percent_Identity=38.8571428571429, Blast_Score=126, Evalue=2e-29,
Organism=Homo sapiens, GI68989263, Length=198, Percent_Identity=41.4141414141414, Blast_Score=126, Evalue=2e-29,
Organism=Homo sapiens, GI4502327, Length=253, Percent_Identity=34.7826086956522, Blast_Score=115, Evalue=4e-26,
Organism=Homo sapiens, GI31542718, Length=247, Percent_Identity=30.7692307692308, Blast_Score=105, Evalue=3e-23,
Organism=Homo sapiens, GI70995211, Length=250, Percent_Identity=29.6, Blast_Score=105, Evalue=4e-23,
Organism=Homo sapiens, GI213417737, Length=218, Percent_Identity=29.3577981651376, Blast_Score=99, Evalue=4e-21,
Organism=Homo sapiens, GI157694516, Length=218, Percent_Identity=29.3577981651376, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI261878539, Length=101, Percent_Identity=52.4752475247525, Blast_Score=92, Evalue=5e-19,
Organism=Homo sapiens, GI157694520, Length=185, Percent_Identity=30.8108108108108, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI150378541, Length=248, Percent_Identity=31.0483870967742, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI37594469, Length=206, Percent_Identity=28.6407766990291, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI37594471, Length=206, Percent_Identity=28.6407766990291, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI62530384, Length=202, Percent_Identity=29.2079207920792, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1787659, Length=257, Percent_Identity=39.6887159533074, Blast_Score=162, Evalue=2e-41,
Organism=Escherichia coli, GI1788597, Length=247, Percent_Identity=36.0323886639676, Blast_Score=137, Evalue=8e-34,
Organism=Escherichia coli, GI87082183, Length=263, Percent_Identity=32.6996197718631, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI1788682, Length=201, Percent_Identity=39.8009950248756, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI221142681, Length=258, Percent_Identity=33.3333333333333, Blast_Score=124, Evalue=7e-30,
Organism=Escherichia coli, GI1790281, Length=188, Percent_Identity=35.1063829787234, Blast_Score=110, Evalue=7e-26,
Organism=Escherichia coli, GI1787660, Length=263, Percent_Identity=34.6007604562738, Blast_Score=108, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI17554946, Length=253, Percent_Identity=39.5256916996047, Blast_Score=176, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI25145438, Length=248, Percent_Identity=38.3064516129032, Blast_Score=164, Evalue=5e-41,
Organism=Caenorhabditis elegans, GI17540714, Length=228, Percent_Identity=35.5263157894737, Blast_Score=139, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI17534483, Length=254, Percent_Identity=29.9212598425197, Blast_Score=117, Evalue=5e-27,
Organism=Caenorhabditis elegans, GI17558304, Length=182, Percent_Identity=36.8131868131868, Blast_Score=116, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17508951, Length=211, Percent_Identity=36.4928909952607, Blast_Score=112, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17508953, Length=211, Percent_Identity=36.4928909952607, Blast_Score=112, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI25144276, Length=211, Percent_Identity=36.4928909952607, Blast_Score=112, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17536985, Length=275, Percent_Identity=27.2727272727273, Blast_Score=107, Evalue=9e-24,
Organism=Caenorhabditis elegans, GI17560910, Length=257, Percent_Identity=28.7937743190661, Blast_Score=100, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI25144157, Length=191, Percent_Identity=32.9842931937173, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI25144160, Length=191, Percent_Identity=32.4607329842932, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17540306, Length=253, Percent_Identity=30.0395256916996, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17549921, Length=210, Percent_Identity=30, Blast_Score=87, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI25141363, Length=211, Percent_Identity=25.1184834123223, Blast_Score=65, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6320241, Length=222, Percent_Identity=30.1801801801802, Blast_Score=101, Evalue=1e-22,
Organism=Drosophila melanogaster, GI20129971, Length=248, Percent_Identity=43.1451612903226, Blast_Score=191, Evalue=6e-49,
Organism=Drosophila melanogaster, GI24653477, Length=248, Percent_Identity=43.1451612903226, Blast_Score=191, Evalue=6e-49,
Organism=Drosophila melanogaster, GI24653139, Length=249, Percent_Identity=33.7349397590361, Blast_Score=138, Evalue=4e-33,
Organism=Drosophila melanogaster, GI19922422, Length=260, Percent_Identity=27.3076923076923, Blast_Score=111, Evalue=5e-25,
Organism=Drosophila melanogaster, GI19920382, Length=227, Percent_Identity=29.0748898678414, Blast_Score=98, Evalue=6e-21,
Organism=Drosophila melanogaster, GI19921000, Length=175, Percent_Identity=39.4285714285714, Blast_Score=95, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24583077, Length=175, Percent_Identity=39.4285714285714, Blast_Score=95, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24583079, Length=175, Percent_Identity=39.4285714285714, Blast_Score=95, Evalue=4e-20,
Organism=Drosophila melanogaster, GI21357171, Length=254, Percent_Identity=31.8897637795276, Blast_Score=91, Evalue=8e-19,
Organism=Drosophila melanogaster, GI24650670, Length=252, Percent_Identity=30.1587301587302, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24654903, Length=187, Percent_Identity=26.2032085561497, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI28571729, Length=195, Percent_Identity=27.1794871794872, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28571730, Length=195, Percent_Identity=27.1794871794872, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24583165, Length=204, Percent_Identity=28.921568627451, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014748
- InterPro:   IPR001753
- InterPro:   IPR018376 [H]

Pfam domain/function: PF00378 ECH [H]

EC number: =4.2.1.55 [H]

Molecular weight: Translated: 27649; Mature: 27517

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS00166 ENOYL_COA_HYDRATASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNHVILIADHASVRTITVNRPDKLNALNQATMQALDQAFQDAAAADDVRAVILTGAGPK
CCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
AFVAGADIAEMSDLSAIQGRAFSLLGQRLMRRIERMPKPVIAMINGFALGGGLELAMACH
CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCEEECCCHHHHHHHH
LRIAAATARLGQPEINLGLIPGFGGTQRLLRLTGRAAALELCLLGLPIDAARALQLGLVN
HHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
RVVEADALHEETLALAQRLANAAPLALRGILDAVMFGGECAIEEGLQLEAAQFALLFATD
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHCCCEEEHHHEEEEEECC
DMREGTRAFLDKRPAQFRNR
CHHHHHHHHHHCCCHHHCCC
>Mature Secondary Structure 
SNHVILIADHASVRTITVNRPDKLNALNQATMQALDQAFQDAAAADDVRAVILTGAGPK
CCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
AFVAGADIAEMSDLSAIQGRAFSLLGQRLMRRIERMPKPVIAMINGFALGGGLELAMACH
CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCEEECCCHHHHHHHH
LRIAAATARLGQPEINLGLIPGFGGTQRLLRLTGRAAALELCLLGLPIDAARALQLGLVN
HHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
RVVEADALHEETLALAQRLANAAPLALRGILDAVMFGGECAIEEGLQLEAAQFALLFATD
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHCCCEEEHHHEEEEEECC
DMREGTRAFLDKRPAQFRNR
CHHHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8655474; 11466286 [H]