Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21242314
Identifier: 21242314
GI number: 21242314
Start: 1806754
End: 1807218
Strand: Reverse
Name: 21242314
Synonym: XAC1563
Alternate gene names: NA
Gene position: 1807218-1806754 (Counterclockwise)
Preceding gene: 21242316
Following gene: 21242312
Centisome position: 34.92
GC content: 66.24
Gene sequence:
>465_bases TTGGTGATCACAACGCACTGCAGCAAGCGCTCGGACCTTGCCGCATCGCTGCGACCCGAGCGCGCTCCAGCGTTGCCGCG TATAGCGGCAGCGCGGGAGCGCGGCAAGACCTCAGCGCAAGCCAGTCTCGCCGCGCGCATTCACCAGGCGCTGGATTTCC GAAGTCCCCTCGTAGATTTCGGTGATCTTTGCATCGCGGAGAGCGCTCCAGCGTTGCCGCGCGTGGCGGCAGCGCTGGAG CGCGGTCGACTTCAGCGCAAGCCAGTCTCGCCGCGCGCAATCACCAGGCGCTGGATTTCCGAGGTGCCCTCGCAGATTTC GGTGATCTTTGCATCGCGGAGAGCGCTCCAGCGTTGCCGCGCGTGGCGGCAGCGCTGGAGCGCGGTCGACTTCAGCGCAA GCCAGTCTCGCCGCGCGCTATCACCAGGCGCTGGATTTCCGAGGTGCCCTCGTAGATTTCGGTGA
Upstream 100 bases:
>100_bases AGCAGCGTGCGAAGACCGGGACATGCGCGCACCAGACACGGGAGAGGCGTCGATTGTGGTCCGCGCCTGCAACGCAGGAC AAGCGTTGGCGTAGCCGCCC
Downstream 100 bases:
>100_bases TCTTTGCATCGCGGAGAGCGCTCCAGCGTTGCCGCGCGTGGCGGCAGCGCTGGAGCGCGGTCGACTTCAGCGCAAGCCAG TCTCGCCGCGTGCAATCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MVITTHCSKRSDLAASLRPERAPALPRIAAARERGKTSAQASLAARIHQALDFRSPLVDFGDLCIAESAPALPRVAAALE RGRLQRKPVSPRAITRRWISEVPSQISVIFASRRALQRCRAWRQRWSAVDFSASQSRRALSPGAGFPRCPRRFR
Sequences:
>Translated_154_residues MVITTHCSKRSDLAASLRPERAPALPRIAAARERGKTSAQASLAARIHQALDFRSPLVDFGDLCIAESAPALPRVAAALE RGRLQRKPVSPRAITRRWISEVPSQISVIFASRRALQRCRAWRQRWSAVDFSASQSRRALSPGAGFPRCPRRFR >Mature_154_residues MVITTHCSKRSDLAASLRPERAPALPRIAAARERGKTSAQASLAARIHQALDFRSPLVDFGDLCIAESAPALPRVAAALE RGRLQRKPVSPRAITRRWISEVPSQISVIFASRRALQRCRAWRQRWSAVDFSASQSRRALSPGAGFPRCPRRFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17138; Mature: 17138
Theoretical pI: Translated: 12.41; Mature: 12.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVITTHCSKRSDLAASLRPERAPALPRIAAARERGKTSAQASLAARIHQALDFRSPLVDF CEECCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHH GDLCIAESAPALPRVAAALERGRLQRKPVSPRAITRRWISEVPSQISVIFASRRALQRCR HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWRQRWSAVDFSASQSRRALSPGAGFPRCPRRFR HHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MVITTHCSKRSDLAASLRPERAPALPRIAAARERGKTSAQASLAARIHQALDFRSPLVDF CEECCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHH GDLCIAESAPALPRVAAALERGRLQRKPVSPRAITRRWISEVPSQISVIFASRRALQRCR HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWRQRWSAVDFSASQSRRALSPGAGFPRCPRRFR HHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA