Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21242258
Identifier: 21242258
GI number: 21242258
Start: 1737935
End: 1738732
Strand: Reverse
Name: 21242258
Synonym: XAC1506
Alternate gene names: NA
Gene position: 1738732-1737935 (Counterclockwise)
Preceding gene: 21242260
Following gene: 21242251
Centisome position: 33.6
GC content: 45.24
Gene sequence:
>798_bases ATGGAATGGCTTAAATTTTCAACAGGCGAGATCGCTGCTGGCTCCATCATCGCGTTTCTCTTAGCAGCCGTATTTGCATG CTGGCGCTCCGGCTCTCTCCATCCTATCAACACCCGTGTGCTGCGCCTTTTTATTAGCAAAGACGATATTGAAGACGAAG TCATTCGCAAGAATTTAGCGGATCACTCTGCACTTGCGGGATTTCGAATGGCACATCAAATTCGCGCCCAAACTCTTAAA GACGCTAAGGCCCTCATTGCCTTTTCGGATTTACACAACATCCCGCTCAAACTGATTGGACATGCAGGGTGGGCGTTTGA TCTCAAAAGCCATGTCATCCACCCAAAACGAGTTCACTCAAAGTGGTGGATGATTTTGCCATTGATCCCATTCGTGGCAT CTATTTTTCTTGCTGCCATATTGTGCATGATTGCCACAAAAGATAGCTTACTAGTTAGCTTAAAAGAAACGGGGACAGAT TTATATATTGCTGAAACCGAAGCAAAAACGACAGGACTTTTTTCAAGCAGGAGAGATACTTTAACTATCGACCAGTGCAA AAACACTGCCGACAAACAAGTCATCCCTGCAACCTTCGACCCCCGAGATCTTAAAATTCTTTGCCAGGTTTGGGCAGATC CAACACTTAAACCGCATCTAGCAAAAGAAGTGCCCAAGCAAAGACATGCATCGCTGTTTGCCTTCGCGGTCTCGCTATGG TGCGCCTGGCTCTTCTATACCATATGTAGAGAGTTGATTTCTGCAAATAAACTTAAAGATCTTCTTGAAGAGCGGTAA
Upstream 100 bases:
>100_bases ACCTGTACGGATCAAAAAATGATTAGGTGTCACAAATACTTTCCAAACAATTGCATTAACTAAAAAACCACCGACTACAA TCAGAAGGCATTTACAACAA
Downstream 100 bases:
>100_bases TCCCCCCGCTTTTAGCGTTCGCCAAAAGTGGAGCTACGCGGCCATCGCCAATTTCATTGCTGGGGTGATACCGCCGAGCG CCATGTTGGGGCGCTCATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MEWLKFSTGEIAAGSIIAFLLAAVFACWRSGSLHPINTRVLRLFISKDDIEDEVIRKNLADHSALAGFRMAHQIRAQTLK DAKALIAFSDLHNIPLKLIGHAGWAFDLKSHVIHPKRVHSKWWMILPLIPFVASIFLAAILCMIATKDSLLVSLKETGTD LYIAETEAKTTGLFSSRRDTLTIDQCKNTADKQVIPATFDPRDLKILCQVWADPTLKPHLAKEVPKQRHASLFAFAVSLW CAWLFYTICRELISANKLKDLLEER
Sequences:
>Translated_265_residues MEWLKFSTGEIAAGSIIAFLLAAVFACWRSGSLHPINTRVLRLFISKDDIEDEVIRKNLADHSALAGFRMAHQIRAQTLK DAKALIAFSDLHNIPLKLIGHAGWAFDLKSHVIHPKRVHSKWWMILPLIPFVASIFLAAILCMIATKDSLLVSLKETGTD LYIAETEAKTTGLFSSRRDTLTIDQCKNTADKQVIPATFDPRDLKILCQVWADPTLKPHLAKEVPKQRHASLFAFAVSLW CAWLFYTICRELISANKLKDLLEER >Mature_265_residues MEWLKFSTGEIAAGSIIAFLLAAVFACWRSGSLHPINTRVLRLFISKDDIEDEVIRKNLADHSALAGFRMAHQIRAQTLK DAKALIAFSDLHNIPLKLIGHAGWAFDLKSHVIHPKRVHSKWWMILPLIPFVASIFLAAILCMIATKDSLLVSLKETGTD LYIAETEAKTTGLFSSRRDTLTIDQCKNTADKQVIPATFDPRDLKILCQVWADPTLKPHLAKEVPKQRHASLFAFAVSLW CAWLFYTICRELISANKLKDLLEER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29886; Mature: 29886
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEWLKFSTGEIAAGSIIAFLLAAVFACWRSGSLHPINTRVLRLFISKDDIEDEVIRKNLA CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH DHSALAGFRMAHQIRAQTLKDAKALIAFSDLHNIPLKLIGHAGWAFDLKSHVIHPKRVHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEHHHHCCCHHHHHH KWWMILPLIPFVASIFLAAILCMIATKDSLLVSLKETGTDLYIAETEAKTTGLFSSRRDT HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCEEEEEECCCHHHHHHHCCCCC LTIDQCKNTADKQVIPATFDPRDLKILCQVWADPTLKPHLAKEVPKQRHASLFAFAVSLW EEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHHHH CAWLFYTICRELISANKLKDLLEER HHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEWLKFSTGEIAAGSIIAFLLAAVFACWRSGSLHPINTRVLRLFISKDDIEDEVIRKNLA CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH DHSALAGFRMAHQIRAQTLKDAKALIAFSDLHNIPLKLIGHAGWAFDLKSHVIHPKRVHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEHHHHCCCHHHHHH KWWMILPLIPFVASIFLAAILCMIATKDSLLVSLKETGTDLYIAETEAKTTGLFSSRRDT HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCEEEEEECCCHHHHHHHCCCCC LTIDQCKNTADKQVIPATFDPRDLKILCQVWADPTLKPHLAKEVPKQRHASLFAFAVSLW EEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHHHH CAWLFYTICRELISANKLKDLLEER HHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA