Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
---|---|
Accession | NC_003919 |
Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21242201
Identifier: 21242201
GI number: 21242201
Start: 1673522
End: 1675291
Strand: Reverse
Name: 21242201
Synonym: XAC1449
Alternate gene names: NA
Gene position: 1675291-1673522 (Counterclockwise)
Preceding gene: 21242204
Following gene: 21242200
Centisome position: 32.37
GC content: 64.86
Gene sequence:
>1770_bases ATGCCCCGCTTCACTCGCCTGGCCCTGAGCCTGTTGCTGCTGACTTCCGCCCCCGCCGCGCTGGCTGCCGCGCCGCTGAC CACTCAGGCAGAGCGCAGCGGTTTTATCCAGACCGGCCGCTACGACGAAGTCATTGCATTGTGCGATGCGTTTGCGCAGC GCTACCCGCAGGCCGTGCGTTGCATCCAGTTCGGCACTACGCCCGAGGGCAGGCCGATGAAGGCCCTGATCGCCTCCACC AGTGGCGCGCTCGACCCGCAATCGGCCGCGCAACGCAAGTTGCCGGTGGTCTTGGTCCAGGGCGGCATCCATGCCGGCGA GATCGATGGCAAGGATGCGGGCTTTCTCGCTCTGCGCGAGTTGCTCGACGGCAAGGCCGGCAACGGCGTGCTCGACAAGC TGGTGTGGGTGTTCGTACCGGTATTCAACGTCGACGGACATGAGCGCTTCGGTGCCTGGAACCGCCCCAACCAGCGCGGC CCCGAACAGATGGGCTGGCGCACCACCGCGCAGAACCTCAATCTCAACCGCGACTACGTCAAAGCGGACGCGCCGGAAAT GCAGGCCATGCTGCAACTGGTGCAGCAGTGGGACCCGCTGATGGTCGTAGACCTGCACGTCACCGACGGCGCCAAGTTCG AGCACGATGTGTCAGTGCAGGTGGAACCGGTGCATGCCGGCGATACGACCTTGCAGCGCGATGGCACCCGCTGGCGCGAC GCAGTGCTTGCCGACCTGAAAAAACAGGGCTCGCTGCCGCTGCCCTACTACCCGTCCTTCGTGCACGAAGACGACCCCAG TTCCGGCTTCGCCGATGATGTGTCGCCGCCGCGCTTTTCGCACGGCTATTTCCTGCTACGCAACCGCTTCGGCATGTTGG TGGAAACGCATTCGTGGAAGGATTACCCCACGCGTGTGCGGATCACCCGCAATGCCATCGTTTCGGTGCTGCAGCAGGCC GCACGCCATGGCAGCCAGTGGCGCGCCGATGCATTGGCTGCCGATCAGCGCGCCACACGTTTGGCCGGCACGACCGAACC GTTGAGCTTCGCTGCGGGCCCAGACGCACGCACCGTCGCGTTTCGTGGCTACGCGTATACGCGCACACCGTCGCCGATTT CCGGCGCGCTGATGACGCGCTACGACGAGAGCAAGCCGCAAGTCTGGAAGGTGCCGCTGCGCGATCAGATCAAACCCGAT GCGGTGGTGGATGCGCCACGCGGCGGCTACCTGGTCCCGGCTGCGCAAGCCGCCTTGGTCGGCGGAAAACTGCGCCTGCA TGGCATTCAATTCACGACCATCGGCAATGCGGCGGAGCGGCCGGTGCAAACCTTCCGCGCCGACGCGGTCAAGTTCTCGG CACGCTCCAACGAAAGCCATCAGACAGTCGAACTCAGCGGGCAATGGCGCAATGAAACCCGCAGCGTGCCGGCCGGCTCC TTGTTCGTGCCGATCGCCCAACCCAAGGCGCGTCTGGTGATGGCGATCCTGGAACCGCAGGCGCCGGATTCGCTGCTGCA GTGGGGCTTTTTCAATACCGCGTTCGAGCGCAAGGAATACATGGAAGCCTACGTCGCCGAAGAGGTAGCGCGCGACATGC TTGGGCGCGATGCCGCGTTGAGGGCGCAGTTCGAACAGCGCATCGCCAGCGATCCGGACTTTTCCAACAACCCGCAGGCG CGGCTGGAATTCTTCGCCAAGCGCCACGCATCGTGGGATGAGCGCTACCAGCTCTACCCGGTACTCCGCACCGCGCAGAC CGACTTCTAG
Upstream 100 bases:
>100_bases CATGGCACCGATCACAGCAGGATCATGACGCAGTGCAGATTGGCCTTGCACGCTGGCTCGGCTACATTGCAAACGTTTTC CTGGAACACTGGACCGCTGG
Downstream 100 bases:
>100_bases CCGTCCGCCGATTCTGCACGCGTCGCGCGGAATGCTCGCGCCCTCCCGATTGTGGGCATTTTGGTGCCCCTCTTTATGTC TTGAACCAGCACTACAAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Carboxypeptidase; M14 Family Peptidase; Zinc Carboxypeptidase Family Protein; Peptidase Family M; Zinc Carboxypeptidase; Zinc Carboxypeptidase Family; Secreted Protein
Number of amino acids: Translated: 589; Mature: 588
Protein sequence:
>589_residues MPRFTRLALSLLLLTSAPAALAAAPLTTQAERSGFIQTGRYDEVIALCDAFAQRYPQAVRCIQFGTTPEGRPMKALIAST SGALDPQSAAQRKLPVVLVQGGIHAGEIDGKDAGFLALRELLDGKAGNGVLDKLVWVFVPVFNVDGHERFGAWNRPNQRG PEQMGWRTTAQNLNLNRDYVKADAPEMQAMLQLVQQWDPLMVVDLHVTDGAKFEHDVSVQVEPVHAGDTTLQRDGTRWRD AVLADLKKQGSLPLPYYPSFVHEDDPSSGFADDVSPPRFSHGYFLLRNRFGMLVETHSWKDYPTRVRITRNAIVSVLQQA ARHGSQWRADALAADQRATRLAGTTEPLSFAAGPDARTVAFRGYAYTRTPSPISGALMTRYDESKPQVWKVPLRDQIKPD AVVDAPRGGYLVPAAQAALVGGKLRLHGIQFTTIGNAAERPVQTFRADAVKFSARSNESHQTVELSGQWRNETRSVPAGS LFVPIAQPKARLVMAILEPQAPDSLLQWGFFNTAFERKEYMEAYVAEEVARDMLGRDAALRAQFEQRIASDPDFSNNPQA RLEFFAKRHASWDERYQLYPVLRTAQTDF
Sequences:
>Translated_589_residues MPRFTRLALSLLLLTSAPAALAAAPLTTQAERSGFIQTGRYDEVIALCDAFAQRYPQAVRCIQFGTTPEGRPMKALIAST SGALDPQSAAQRKLPVVLVQGGIHAGEIDGKDAGFLALRELLDGKAGNGVLDKLVWVFVPVFNVDGHERFGAWNRPNQRG PEQMGWRTTAQNLNLNRDYVKADAPEMQAMLQLVQQWDPLMVVDLHVTDGAKFEHDVSVQVEPVHAGDTTLQRDGTRWRD AVLADLKKQGSLPLPYYPSFVHEDDPSSGFADDVSPPRFSHGYFLLRNRFGMLVETHSWKDYPTRVRITRNAIVSVLQQA ARHGSQWRADALAADQRATRLAGTTEPLSFAAGPDARTVAFRGYAYTRTPSPISGALMTRYDESKPQVWKVPLRDQIKPD AVVDAPRGGYLVPAAQAALVGGKLRLHGIQFTTIGNAAERPVQTFRADAVKFSARSNESHQTVELSGQWRNETRSVPAGS LFVPIAQPKARLVMAILEPQAPDSLLQWGFFNTAFERKEYMEAYVAEEVARDMLGRDAALRAQFEQRIASDPDFSNNPQA RLEFFAKRHASWDERYQLYPVLRTAQTDF >Mature_588_residues PRFTRLALSLLLLTSAPAALAAAPLTTQAERSGFIQTGRYDEVIALCDAFAQRYPQAVRCIQFGTTPEGRPMKALIASTS GALDPQSAAQRKLPVVLVQGGIHAGEIDGKDAGFLALRELLDGKAGNGVLDKLVWVFVPVFNVDGHERFGAWNRPNQRGP EQMGWRTTAQNLNLNRDYVKADAPEMQAMLQLVQQWDPLMVVDLHVTDGAKFEHDVSVQVEPVHAGDTTLQRDGTRWRDA VLADLKKQGSLPLPYYPSFVHEDDPSSGFADDVSPPRFSHGYFLLRNRFGMLVETHSWKDYPTRVRITRNAIVSVLQQAA RHGSQWRADALAADQRATRLAGTTEPLSFAAGPDARTVAFRGYAYTRTPSPISGALMTRYDESKPQVWKVPLRDQIKPDA VVDAPRGGYLVPAAQAALVGGKLRLHGIQFTTIGNAAERPVQTFRADAVKFSARSNESHQTVELSGQWRNETRSVPAGSL FVPIAQPKARLVMAILEPQAPDSLLQWGFFNTAFERKEYMEAYVAEEVARDMLGRDAALRAQFEQRIASDPDFSNNPQAR LEFFAKRHASWDERYQLYPVLRTAQTDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65394; Mature: 65262
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRFTRLALSLLLLTSAPAALAAAPLTTQAERSGFIQTGRYDEVIALCDAFAQRYPQAVR CCHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHCCCEECCCHHHHHHHHHHHHHHCHHHHH CIQFGTTPEGRPMKALIASTSGALDPQSAAQRKLPVVLVQGGIHAGEIDGKDAGFLALRE HEECCCCCCCCCHHHHEECCCCCCCCHHHHHCCCCEEEEECCCEECCCCCCCHHHHHHHH LLDGKAGNGVLDKLVWVFVPVFNVDGHERFGAWNRPNQRGPEQMGWRTTAQNLNLNRDYV HHCCCCCCHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCHHHCCCHHHHCCCCCCHHH KADAPEMQAMLQLVQQWDPLMVVDLHVTDGAKFEHDVSVQVEPVHAGDTTLQRDGTRWRD CCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHH AVLADLKKQGSLPLPYYPSFVHEDDPSSGFADDVSPPRFSHGYFLLRNRFGMLVETHSWK HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCC DYPTRVRITRNAIVSVLQQAARHGSQWRADALAADQRATRLAGTTEPLSFAAGPDARTVA CCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEE FRGYAYTRTPSPISGALMTRYDESKPQVWKVPLRDQIKPDAVVDAPRGGYLVPAAQAALV EECEEEECCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCCCEEECCCCCEECCCHHHHHC GGKLRLHGIQFTTIGNAAERPVQTFRADAVKFSARSNESHQTVELSGQWRNETRSVPAGS CCEEEEEEEEEEECCCHHHHHHHHHHHHHHEEECCCCCCCEEEEECCCCCCCCCCCCCCC LFVPIAQPKARLVMAILEPQAPDSLLQWGFFNTAFERKEYMEAYVAEEVARDMLGRDAAL EEEECCCCHHHEEEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH RAQFEQRIASDPDFSNNPQARLEFFAKRHASWDERYQLYPVLRTAQTDF HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEHHHHHCCCCC >Mature Secondary Structure PRFTRLALSLLLLTSAPAALAAAPLTTQAERSGFIQTGRYDEVIALCDAFAQRYPQAVR CHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHCCCEECCCHHHHHHHHHHHHHHCHHHHH CIQFGTTPEGRPMKALIASTSGALDPQSAAQRKLPVVLVQGGIHAGEIDGKDAGFLALRE HEECCCCCCCCCHHHHEECCCCCCCCHHHHHCCCCEEEEECCCEECCCCCCCHHHHHHHH LLDGKAGNGVLDKLVWVFVPVFNVDGHERFGAWNRPNQRGPEQMGWRTTAQNLNLNRDYV HHCCCCCCHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCHHHCCCHHHHCCCCCCHHH KADAPEMQAMLQLVQQWDPLMVVDLHVTDGAKFEHDVSVQVEPVHAGDTTLQRDGTRWRD CCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHH AVLADLKKQGSLPLPYYPSFVHEDDPSSGFADDVSPPRFSHGYFLLRNRFGMLVETHSWK HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCC DYPTRVRITRNAIVSVLQQAARHGSQWRADALAADQRATRLAGTTEPLSFAAGPDARTVA CCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEE FRGYAYTRTPSPISGALMTRYDESKPQVWKVPLRDQIKPDAVVDAPRGGYLVPAAQAALV EECEEEECCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCCCEEECCCCCEECCCHHHHHC GGKLRLHGIQFTTIGNAAERPVQTFRADAVKFSARSNESHQTVELSGQWRNETRSVPAGS CCEEEEEEEEEEECCCHHHHHHHHHHHHHHEEECCCCCCCEEEEECCCCCCCCCCCCCCC LFVPIAQPKARLVMAILEPQAPDSLLQWGFFNTAFERKEYMEAYVAEEVARDMLGRDAAL EEEECCCCHHHEEEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH RAQFEQRIASDPDFSNNPQARLEFFAKRHASWDERYQLYPVLRTAQTDF HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA