Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21242138
Identifier: 21242138
GI number: 21242138
Start: 1591412
End: 1592068
Strand: Reverse
Name: 21242138
Synonym: XAC1385
Alternate gene names: NA
Gene position: 1592068-1591412 (Counterclockwise)
Preceding gene: 21242139
Following gene: 21242137
Centisome position: 30.76
GC content: 65.45
Gene sequence:
>657_bases ATGTCCCGGTGGGAGAAGGGACATCCGGCACAGCTTCAACCAACTCCAATCCACCATCCCCGCGCCATGCACCTCGCCCT GTTCGACTTCGATCACACCGTCACCACCTGCGACACCTATGCGCGCTTCCTGCGCAAGGTGGCCACGCCCGCGCAGCTGG CCGCGGCAAAGTGGCAGGTCGGCCCGTGGGTGCTGGGCTATCGGCTGGGCGTGGTGTCCGCTGCCGCGCTGCGCACGCGG GTGACGCGCATCGTGTTCAGTGGTCGCTCGCTGGACGAGATGGCCATGCATGGCGCCGATTACGCGCGCACTGCACTGCC GGGCGTGTTGCGCGCAGAAATGATGCAACGCATCGACTGGCATCAGGCGCGAGGGCATGAGGTAGTGCTTGTCTCCGGCT CGCTGGATCTGTACCTGCAGCCCTGGTGCACGCAGCATGGGCTGTCGCTGATCTGCAACCGGCTCGAACACACCGGTGGC GCGCTGAGCGGGCGCTACGCCGACGGCGATTGCGGGCCGCACAAGGTTGCGCGGATTCGCAGTCAATACGAGCTGCCTCG GTACGACTGCGTGCACGCCTATGGCGACAGCCGCGAAGACAAACCGATGCTCGCGCTTGCGCAACAACGCTGGTATCGCG GCAATCTGCTGCATTGA
Upstream 100 bases:
>100_bases GGGTACGCGGCGAAGCTCTGGTGTCGTTGTCACTGCACGTGGCTCCGCTCGTACCCTCATCCGCCCCTGCGGGGCACTTT CTCCCCCATGAAGGAGGACA
Downstream 100 bases:
>100_bases GATGACCGCGATGCCTGCCCCTGCACCCGATCTGGTCGAACGCCTCGACCGCCTGCTGCCGCAGACCCAATGCGGGCAAT GCGGGTATGACGGCTGTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphoserine Phosphatase; HAD-Superfamily Subfamily IB Hydrolase; HAD-Superfamily Subfamily IB Hydrolase TIGR; HAD-Superfamily Hydrolase; Phosphatase; Hydrolase
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MSRWEKGHPAQLQPTPIHHPRAMHLALFDFDHTVTTCDTYARFLRKVATPAQLAAAKWQVGPWVLGYRLGVVSAAALRTR VTRIVFSGRSLDEMAMHGADYARTALPGVLRAEMMQRIDWHQARGHEVVLVSGSLDLYLQPWCTQHGLSLICNRLEHTGG ALSGRYADGDCGPHKVARIRSQYELPRYDCVHAYGDSREDKPMLALAQQRWYRGNLLH
Sequences:
>Translated_218_residues MSRWEKGHPAQLQPTPIHHPRAMHLALFDFDHTVTTCDTYARFLRKVATPAQLAAAKWQVGPWVLGYRLGVVSAAALRTR VTRIVFSGRSLDEMAMHGADYARTALPGVLRAEMMQRIDWHQARGHEVVLVSGSLDLYLQPWCTQHGLSLICNRLEHTGG ALSGRYADGDCGPHKVARIRSQYELPRYDCVHAYGDSREDKPMLALAQQRWYRGNLLH >Mature_217_residues SRWEKGHPAQLQPTPIHHPRAMHLALFDFDHTVTTCDTYARFLRKVATPAQLAAAKWQVGPWVLGYRLGVVSAAALRTRV TRIVFSGRSLDEMAMHGADYARTALPGVLRAEMMQRIDWHQARGHEVVLVSGSLDLYLQPWCTQHGLSLICNRLEHTGGA LSGRYADGDCGPHKVARIRSQYELPRYDCVHAYGDSREDKPMLALAQQRWYRGNLLH
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24650; Mature: 24518
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRWEKGHPAQLQPTPIHHPRAMHLALFDFDHTVTTCDTYARFLRKVATPAQLAAAKWQV CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHCCC GPWVLGYRLGVVSAAALRTRVTRIVFSGRSLDEMAMHGADYARTALPGVLRAEMMQRIDW CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH HQARGHEVVLVSGSLDLYLQPWCTQHGLSLICNRLEHTGGALSGRYADGDCGPHKVARIR HHCCCCEEEEEECCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH SQYELPRYDCVHAYGDSREDKPMLALAQQRWYRGNLLH HHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure SRWEKGHPAQLQPTPIHHPRAMHLALFDFDHTVTTCDTYARFLRKVATPAQLAAAKWQV CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHCCC GPWVLGYRLGVVSAAALRTRVTRIVFSGRSLDEMAMHGADYARTALPGVLRAEMMQRIDW CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH HQARGHEVVLVSGSLDLYLQPWCTQHGLSLICNRLEHTGGALSGRYADGDCGPHKVARIR HHCCCCEEEEEECCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH SQYELPRYDCVHAYGDSREDKPMLALAQQRWYRGNLLH HHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA