Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21242097
Identifier: 21242097
GI number: 21242097
Start: 1550909
End: 1551463
Strand: Reverse
Name: 21242097
Synonym: XAC1344
Alternate gene names: NA
Gene position: 1551463-1550909 (Counterclockwise)
Preceding gene: 21242098
Following gene: 21242096
Centisome position: 29.98
GC content: 66.31
Gene sequence:
>555_bases ATGTCGATGTGGCGCGATCAAGGTCCCAACAAGAAAGACGGCGTTCCGGTCACCCCCGAGGTTGCTGCTGCCGATGGCAG GCTGTTCACTGCCGAGGCCAGCCCTGCACCGCCGGTGCCCGCCGCAACGCCCAGCGTCGTACCGGCAGCTGCGCCCACGC AGCGTCACAGCGAGGCGAAAGAGTCGCTGATTGCTGCCGACATCAGCATCGAAGGCAAGATCGAAGGCGCCGGCCATGTG CGTCTGGCCGGCCGCTTCAAGGGCGATGTCAACGTCAAGGGCGATCTGACCATCGAACGCGGCGCCAAGCTCAATGGCGG CGTGCGCGCCAACAAAGTGATCATCGCCGGCGAGCTGGAGGGCAACATCGAATCTGCCGCGCAGGTCGAACTGCAGACGT CCGGTGTGTTGGTCGGCGACGTCAAGGCCGGCAGTCTCACGGTGGCCTCCGGTGCGCGCATGCGCGGCCAGGCCGATTTC GGCTGGGGCGATGATGGCGGCAAGCCGGTCACGACCAGCAAGCCGGTGGTCAGCGGAGACAGCGACGCCACATGA
Upstream 100 bases:
>100_bases TCGGCACGCACACCGTCCATCGTGGATTGCGGAGTTCGTCACAAAAAAGATCCAGTGGCACAGCGATAGTCGGCCTCGAC CCCTAAAGCGAGGCAGTCCG
Downstream 100 bases:
>100_bases GTGCACCTCGCCCGGGCACGCCCGGCGCCACGCGCAGCTGCCCGCACTGCAAGGCGACGATCCTGGAAAGCGCCAGCGTC TGCCCTGCGTGCAAGCACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MSMWRDQGPNKKDGVPVTPEVAAADGRLFTAEASPAPPVPAATPSVVPAAAPTQRHSEAKESLIAADISIEGKIEGAGHV RLAGRFKGDVNVKGDLTIERGAKLNGGVRANKVIIAGELEGNIESAAQVELQTSGVLVGDVKAGSLTVASGARMRGQADF GWGDDGGKPVTTSKPVVSGDSDAT
Sequences:
>Translated_184_residues MSMWRDQGPNKKDGVPVTPEVAAADGRLFTAEASPAPPVPAATPSVVPAAAPTQRHSEAKESLIAADISIEGKIEGAGHV RLAGRFKGDVNVKGDLTIERGAKLNGGVRANKVIIAGELEGNIESAAQVELQTSGVLVGDVKAGSLTVASGARMRGQADF GWGDDGGKPVTTSKPVVSGDSDAT >Mature_183_residues SMWRDQGPNKKDGVPVTPEVAAADGRLFTAEASPAPPVPAATPSVVPAAAPTQRHSEAKESLIAADISIEGKIEGAGHVR LAGRFKGDVNVKGDLTIERGAKLNGGVRANKVIIAGELEGNIESAAQVELQTSGVLVGDVKAGSLTVASGARMRGQADFG WGDDGGKPVTTSKPVVSGDSDAT
Specific function: Unknown
COG id: COG1664
COG function: function code M; Integral membrane protein CcmA involved in cell shape determination
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18661; Mature: 18530
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMWRDQGPNKKDGVPVTPEVAAADGRLFTAEASPAPPVPAATPSVVPAAAPTQRHSEAK CCCCCCCCCCCCCCCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH ESLIAADISIEGKIEGAGHVRLAGRFKGDVNVKGDLTIERGAKLNGGVRANKVIIAGELE HHEEEEEEEEEEEECCCCEEEEEEEECCCEECCCCEEEECCCCCCCCEEECEEEEEEECC GNIESAAQVELQTSGVLVGDVKAGSLTVASGARMRGQADFGWGDDGGKPVTTSKPVVSGD CCCCCEEEEEEECCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCC SDAT CCCC >Mature Secondary Structure SMWRDQGPNKKDGVPVTPEVAAADGRLFTAEASPAPPVPAATPSVVPAAAPTQRHSEAK CCCCCCCCCCCCCCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH ESLIAADISIEGKIEGAGHVRLAGRFKGDVNVKGDLTIERGAKLNGGVRANKVIIAGELE HHEEEEEEEEEEEECCCCEEEEEEEECCCEECCCCEEEECCCCCCCCEEECEEEEEEECC GNIESAAQVELQTSGVLVGDVKAGSLTVASGARMRGQADFGWGDDGGKPVTTSKPVVSGD CCCCCEEEEEEECCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCC SDAT CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA