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The map label for this gene is cyoC [H]

Identifier: 21242013

GI number: 21242013

Start: 1438824

End: 1439450

Strand: Direct

Name: cyoC [H]

Synonym: XAC1260

Alternate gene names: 21242013

Gene position: 1438824-1439450 (Clockwise)

Preceding gene: 21242012

Following gene: 21242014

Centisome position: 27.8

GC content: 62.68

Gene sequence:

>627_bases
ATGGCTTCCTCGACCACGCTTGACCACGCCGCCCACGTGGGCGGCCACGATCACGACCACGAGCATCACGACGGCGGTGG
CAACACCGTCTTCGGGTTCTGGGTCTACCTGATGAGCGACTGCCTGCTGTTTGCCTGTCTGTTCGCCACCTATGCGGTGC
TCTCCGGCGCCACGGTGGACGGGCCGACTGCCAAGGAGCTGTTCGATCTGAAGTTCGTGCTGGTGGAAACCTTCCTGCTG
TTGTTCAGCAGCCTGAGCTTCGGCTTTGCGATGATTGCCGCGCACAAGCGCAAGATGGGCGGCCTGTACGGCTGGCTGGC
GGTGACCGCGCTGCTGGGTATCGGCTTCCTGTGCATGGAAGTGTGGGAGTTCAACCATCTGATCCATGAAGGTGCCGGCC
CGGGGCGCAGCGCGTTCCTGTCGGCGTTCTTCACCCTGGTGGGCACGCACGGCCTGCACGTGGCCTCCGGCCTTCTGTGG
ATGGCCGTGCTGGTGATCCAGATTTCCAAGAACGGCCTGACAGCGCGCAACAGCACGCGTCTGGCCTGTCTGAGCCTGTT
CTGGCACTTCCTGGACATCATCTGGATCGGTGTGTTCACCGTCGTCTATCTGCTGGGAGCGCTGTAA

Upstream 100 bases:

>100_bases
ATTACTGGGTGCCGGCCGACGAAGTGGAGCGCATCGAAAACGCACGTTTCGCCCTGCTCGAACAGCAACAAGCGGCGCAG
GCCGCGAAGGTGGTATGACC

Downstream 100 bases:

>100_bases
TGGCCAATCACCACCACACCGATACCGCTGCCGACGCGCATGCCGGCGGCCTGAAGTCCTACCTGATCGGCTTTGTGATG
GCCGTGATCCTCACCGTCAT

Product: cytochrome O ubiquinol oxidase subunit III

Products: NA

Alternate protein names: Cytochrome o ubiquinol oxidase subunit III; Ubiquinol oxidase chain C [H]

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MASSTTLDHAAHVGGHDHDHEHHDGGGNTVFGFWVYLMSDCLLFACLFATYAVLSGATVDGPTAKELFDLKFVLVETFLL
LFSSLSFGFAMIAAHKRKMGGLYGWLAVTALLGIGFLCMEVWEFNHLIHEGAGPGRSAFLSAFFTLVGTHGLHVASGLLW
MAVLVIQISKNGLTARNSTRLACLSLFWHFLDIIWIGVFTVVYLLGAL

Sequences:

>Translated_208_residues
MASSTTLDHAAHVGGHDHDHEHHDGGGNTVFGFWVYLMSDCLLFACLFATYAVLSGATVDGPTAKELFDLKFVLVETFLL
LFSSLSFGFAMIAAHKRKMGGLYGWLAVTALLGIGFLCMEVWEFNHLIHEGAGPGRSAFLSAFFTLVGTHGLHVASGLLW
MAVLVIQISKNGLTARNSTRLACLSLFWHFLDIIWIGVFTVVYLLGAL
>Mature_207_residues
ASSTTLDHAAHVGGHDHDHEHHDGGGNTVFGFWVYLMSDCLLFACLFATYAVLSGATVDGPTAKELFDLKFVLVETFLLL
FSSLSFGFAMIAAHKRKMGGLYGWLAVTALLGIGFLCMEVWEFNHLIHEGAGPGRSAFLSAFFTLVGTHGLHVASGLLWM
AVLVIQISKNGLTARNSTRLACLSLFWHFLDIIWIGVFTVVYLLGAL

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG1845

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786633, Length=201, Percent_Identity=63.18407960199, Blast_Score=267, Evalue=3e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000298
- InterPro:   IPR013833
- InterPro:   IPR014206 [H]

Pfam domain/function: PF00510 COX3 [H]

EC number: 1.10.3.-

Molecular weight: Translated: 22637; Mature: 22505

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: PS50253 COX3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASSTTLDHAAHVGGHDHDHEHHDGGGNTVFGFWVYLMSDCLLFACLFATYAVLSGATVD
CCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GPTAKELFDLKFVLVETFLLLFSSLSFGFAMIAAHKRKMGGLYGWLAVTALLGIGFLCME
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
VWEFNHLIHEGAGPGRSAFLSAFFTLVGTHGLHVASGLLWMAVLVIQISKNGLTARNSTR
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
LACLSLFWHFLDIIWIGVFTVVYLLGAL
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ASSTTLDHAAHVGGHDHDHEHHDGGGNTVFGFWVYLMSDCLLFACLFATYAVLSGATVD
CCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GPTAKELFDLKFVLVETFLLLFSSLSFGFAMIAAHKRKMGGLYGWLAVTALLGIGFLCME
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
VWEFNHLIHEGAGPGRSAFLSAFFTLVGTHGLHVASGLLWMAVLVIQISKNGLTARNSTR
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
LACLSLFWHFLDIIWIGVFTVVYLLGAL
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]