Click here to switch to the map view.

The map label for this gene is recR

Identifier: 21241866

GI number: 21241866

Start: 1262303

End: 1262896

Strand: Direct

Name: recR

Synonym: XAC1111

Alternate gene names: 21241866

Gene position: 1262303-1262896 (Clockwise)

Preceding gene: 21241865

Following gene: 21241867

Centisome position: 24.39

GC content: 67.17

Gene sequence:

>594_bases
ATGTCCACTCTGCTCGAACAACTGATCGAGGCCTTCCGGGTATTGCCCGGTGTGGGCCAGAAATCGGCGCAACGCATGGC
CTATCACGTGCTCGAACGCGAGCGTGAGGGCGGGCGTCGGCTTGCCGCTGCGTTGGGCAGCGCGGTGGAAAAGGTGGGGC
ATTGCGTGCAGTGCCGCGACTTCACCGAATCGGAAATCTGCACCATCTGCGCCAGCAGCAGCCGCGACCGGCAGCAGCTG
TGCGTGGTGGAGTCGCCGGCCGACCGCCTGGCGATCGAGCACGCCACCGGCTACCGCGGGCTGTATTTCATCCTGCAGGG
GCGCCTGTCGCCGCTAGATGGCATCGGCCCGCGCGAACTGGGGCTGGACCGGCTCAGTGAACGTCTGGCTGCTGGCGAAG
TGACCGAAATGATCATCGCCACCAACGCCACCGTGGAAGGCGAGGCAACCGCCCATTACCTGGCGCAGCTTGCCCGCCAG
CACGCAGTGCGCCCGAGCCGGCTTGCCCAGGGCATGCCACTGGGCGGCGAGCTGGAGTACGTGGACCGCGGCACCCTGTC
GCACGCCTTCGGCACCCGCAGTGAGGTGCTTTGA

Upstream 100 bases:

>100_bases
TGAGCGAGGGAGAATTGGGAATTGGGAATGGGGAATCGCAAGAGCGAATGCGGTCTTGCTTTTCACAATTCCCTACTCCC
GATTCCCGATTCCAGGCCCA

Downstream 100 bases:

>100_bases
GGGTCGGGAATGGGGAATGGTGAATAGGAATCGGAGAAGCAAAGTCAGAAGCACGCGCGGTAAGCTCTTGCGATTCCCCA
ATCCCGATTCCCTATTCCCA

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MSTLLEQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLAAALGSAVEKVGHCVQCRDFTESEICTICASSSRDRQQL
CVVESPADRLAIEHATGYRGLYFILQGRLSPLDGIGPRELGLDRLSERLAAGEVTEMIIATNATVEGEATAHYLAQLARQ
HAVRPSRLAQGMPLGGELEYVDRGTLSHAFGTRSEVL

Sequences:

>Translated_197_residues
MSTLLEQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLAAALGSAVEKVGHCVQCRDFTESEICTICASSSRDRQQL
CVVESPADRLAIEHATGYRGLYFILQGRLSPLDGIGPRELGLDRLSERLAAGEVTEMIIATNATVEGEATAHYLAQLARQ
HAVRPSRLAQGMPLGGELEYVDRGTLSHAFGTRSEVL
>Mature_196_residues
STLLEQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLAAALGSAVEKVGHCVQCRDFTESEICTICASSSRDRQQLC
VVESPADRLAIEHATGYRGLYFILQGRLSPLDGIGPRELGLDRLSERLAAGEVTEMIIATNATVEGEATAHYLAQLARQH
AVRPSRLAQGMPLGGELEYVDRGTLSHAFGTRSEVL

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=196, Percent_Identity=58.1632653061224, Blast_Score=232, Evalue=1e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_XANAC (Q8PNG0)

Other databases:

- EMBL:   AE008923
- RefSeq:   NP_641448.1
- ProteinModelPortal:   Q8PNG0
- SMR:   Q8PNG0
- GeneID:   1155182
- GenomeReviews:   AE008923_GR
- KEGG:   xac:XAC1111
- NMPDR:   fig|190486.1.peg.1092
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- ProtClustDB:   PRK00076
- BioCyc:   XAXO190486:XAC1111-MONOMER
- HAMAP:   MF_00017
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 21489; Mature: 21358

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLLEQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLAAALGSAVEKVGHCVQCRD
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FTESEICTICASSSRDRQQLCVVESPADRLAIEHATGYRGLYFILQGRLSPLDGIGPREL
CCHHHHHHHHCCCCCCCHHEEEEECCHHHHHHHHCCCCCHHHEEEECCCCCCCCCCHHHH
GLDRLSERLAAGEVTEMIIATNATVEGEATAHYLAQLARQHAVRPSRLAQGMPLGGELEY
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEH
VDRGTLSHAFGTRSEVL
HCCCHHHHHHCCHHCCC
>Mature Secondary Structure 
STLLEQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLAAALGSAVEKVGHCVQCRD
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FTESEICTICASSSRDRQQLCVVESPADRLAIEHATGYRGLYFILQGRLSPLDGIGPREL
CCHHHHHHHHCCCCCCCHHEEEEECCHHHHHHHHCCCCCHHHEEEECCCCCCCCCCHHHH
GLDRLSERLAAGEVTEMIIATNATVEGEATAHYLAQLARQHAVRPSRLAQGMPLGGELEY
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEH
VDRGTLSHAFGTRSEVL
HCCCHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12024217